Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01E050098.5
        

               Conread position:
               38-107
               

               Cow position:
               chr5:16482636-16482567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               70
               

               Alignm identity:
               68
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-205
               

               Cow position:
               chr5:16481293-16481190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               190-285
               

               Cow position:
               chr5:16480566-16480471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               333-416
               

               Cow position:
               chr5:16477650-16477567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-1024
               

               Cow position:
               chr5:16475381-16474866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 95
               

               Conread position:
               1024-1852
               

               Cow position:
               chr5:16474826-16473980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               858
               

               Alignm identity:
               712
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 222
               
Show alignments to all cow chromosomes.