Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01E090087.5 |
| Conread position: | 1-171 |
| Cow position: | chr4:58243214-58243398 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 7-171 |
| Cow position: | chr4:58263244-58263409 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 13-168 |
| Cow position: | chr4:58280758-58280904 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 175-480 |
| Cow position: | chr4:58243483-58243791 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 175-480 |
| Cow position: | chr4:58263632-58263940 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 181-480 |
| Cow position: | chr4:58302636-58302935 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-479 |
| Cow position: | chr4:58281013-58281311 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 27, 157 |
| Conread position: | 184-480 |
| Cow position: | chr4:58305128-58305424 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 180, 167 |
| Conread position: | 204-480 |
| Cow position: | chr4:58288004-58288280 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 138 |
| Conread position: | 512-900 |
| Cow position: | chr4:60540772-60540381 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 512-900 |
| Cow position: | chr4:60549381-60548990 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 0 |
| Conread position: | 512-900 |
| Cow position: | chr4:60559209-60558818 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 0 |
| Conread position: | 918-1032 |
| Cow position: | chr4:60539727-60539613 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 111 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 918-1032 |
| Cow position: | chr4:60548622-60548508 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 918-1032 |
| Cow position: | chr4:60557977-60557863 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1025-1260 |
| Cow position: | chr4:60539347-60539120 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 228, 118 |
Show alignments to all cow chromosomes.