Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01E100015.5
        

               Conread position:
               444-762
               

               Cow position:
               chr1:38706558-38706877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               460-750
               

               Cow position:
               chr1:86061698-86061996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               462-738
               

               Cow position:
               chr1:32014466-32014199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               76, 14
               

               Conread position:
               476-680
               

               Cow position:
               chr1:73374833-73375044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               480-681
               

               Cow position:
               chr1:73397811-73398017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               481-678
               

               Cow position:
               chr1:74304825-74305022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               482-731
               

               Cow position:
               chr1:92915761-92915514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               483-731
               

               Cow position:
               chr1:12090596-12090358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               483-742
               

               Cow position:
               chr1:11488907-11489164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               483-762
               

               Cow position:
               chr1:6228337-6228607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               485-727
               

               Cow position:
               chr1:101883139-101883382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               486-765
               

               Cow position:
               chr1:98046304-98046026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 110
               

               Conread position:
               487-762
               

               Cow position:
               chr1:78092295-78092014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               487-770
               

               Cow position:
               chr1:31357265-31357540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 56
               

               Conread position:
               488-762
               

               Cow position:
               chr1:67529306-67529032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               489-724
               

               Cow position:
               chr1:46939624-46939870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               489-777
               

               Cow position:
               chr1:81391171-81390887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               490-729
               

               Cow position:
               chr1:83677081-83677317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               492-767
               

               Cow position:
               chr1:44946994-44946725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               493-681
               

               Cow position:
               chr1:19384212-19384399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               493-760
               

               Cow position:
               chr1:635441-635706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               493-766
               

               Cow position:
               chr1:56225705-56225441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               269, 5
               

               Conread position:
               494-765
               

               Cow position:
               chr1:30862170-30862435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               495-678
               

               Cow position:
               chr1:65160372-65160188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               495-734
               

               Cow position:
               chr1:25021836-25022070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               495-768
               

               Cow position:
               chr1:42256265-42256535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               497-740
               

               Cow position:
               chr1:70344284-70344039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               497-761
               

               Cow position:
               chr1:10778794-10778541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               497-771
               

               Cow position:
               chr1:51609621-51609343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 143
               

               Conread position:
               499-730
               

               Cow position:
               chr1:39683908-39684136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               499-747
               

               Cow position:
               chr1:4582788-4582543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               499-758
               

               Cow position:
               chr1:72034690-72034942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               501-738
               

               Cow position:
               chr1:5821755-5821514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 124
               

               Conread position:
               501-762
               

               Cow position:
               chr1:21561255-21560989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 5
               

               Conread position:
               501-772
               

               Cow position:
               chr1:35600054-35600327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               502-692
               

               Cow position:
               chr1:10523935-10523747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               502-767
               

               Cow position:
               chr1:42175969-42175690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 120
               

               Conread position:
               502-767
               

               Cow position:
               chr1:89341749-89342015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               502-768
               

               Cow position:
               chr1:6731416-6731150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               502-771
               

               Cow position:
               chr1:42541828-42541566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               504-717
               

               Cow position:
               chr1:102797765-102797976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               506-750
               

               Cow position:
               chr1:31794778-31795016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               506-762
               

               Cow position:
               chr1:91651115-91651380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               506-764
               

               Cow position:
               chr1:73020431-73020687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               506-771
               

               Cow position:
               chr1:52661943-52662205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               507-765
               

               Cow position:
               chr1:62998025-62997773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               509-681
               

               Cow position:
               chr1:80423502-80423675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               509-681
               

               Cow position:
               chr1:86841128-86840955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               509-746
               

               Cow position:
               chr1:22035834-22035604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               509-760
               

               Cow position:
               chr1:8287405-8287651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               509-761
               

               Cow position:
               chr1:96365877-96365642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               509-762
               

               Cow position:
               chr1:26895583-26895835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               509-779
               

               Cow position:
               chr1:66898267-66898538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               510-731
               

               Cow position:
               chr1:69411464-69411690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               510-764
               

               Cow position:
               chr1:13157425-13157159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 132
               

               Conread position:
               510-767
               

               Cow position:
               chr1:81515466-81515202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               42, 181
               

               Conread position:
               511-668
               

               Cow position:
               chr1:43340405-43340564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               511-681
               

               Cow position:
               chr1:60403995-60403823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               43, 118
               

               Conread position:
               511-731
               

               Cow position:
               chr1:34001271-34001055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               511-731
               

               Cow position:
               chr1:40303775-40303559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               511-731
               

               Cow position:
               chr1:43148314-43148537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               511-734
               

               Cow position:
               chr1:15875881-15875665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               511-750
               

               Cow position:
               chr1:72105626-72105401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               511-753
               

               Cow position:
               chr1:57088077-57087828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               511-771
               

               Cow position:
               chr1:57880555-57880817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 116
               

               Conread position:
               512-678
               

               Cow position:
               chr1:31807082-31806921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               512-711
               

               Cow position:
               chr1:41953774-41953975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 116
               

               Conread position:
               512-753
               

               Cow position:
               chr1:14006351-14006102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 117
               

               Conread position:
               512-762
               

               Cow position:
               chr1:3966055-3965813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               512-766
               

               Cow position:
               chr1:871891-872149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               206, 20
               

               Conread position:
               512-766
               

               Cow position:
               chr1:96019453-96019202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               512-768
               

               Cow position:
               chr1:92996660-92996920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               513-675
               

               Cow position:
               chr1:79038338-79038175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               513-675
               

               Cow position:
               chr1:94712939-94713102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               41, 114
               

               Conread position:
               513-681
               

               Cow position:
               chr1:3130323-3130492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               513-681
               

               Cow position:
               chr1:102424019-102423850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               513-729
               

               Cow position:
               chr1:46886454-46886239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               513-767
               

               Cow position:
               chr1:70175319-70175567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               513-770
               

               Cow position:
               chr1:3941992-3942247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               514-675
               

               Cow position:
               chr1:46795980-46795819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 79
               

               Conread position:
               514-679
               

               Cow position:
               chr1:30470007-30469840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 114
               

               Conread position:
               514-722
               

               Cow position:
               chr1:76474338-76474540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               514-729
               

               Cow position:
               chr1:5284002-5284217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 178
               

               Conread position:
               514-730
               

               Cow position:
               chr1:78782209-78781984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 107
               

               Conread position:
               514-743
               

               Cow position:
               chr1:9637253-9637025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 120
               

               Conread position:
               514-749
               

               Cow position:
               chr1:101267778-101268011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 113
               

               Conread position:
               514-760
               

               Cow position:
               chr1:72068611-72068856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               514-762
               

               Cow position:
               chr1:36688160-36688401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               514-762
               

               Cow position:
               chr1:94226321-94226577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 182
               

               Conread position:
               514-767
               

               Cow position:
               chr1:78857101-78857358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 115
               

               Conread position:
               514-770
               

               Cow position:
               chr1:98897467-98897725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 172
               

               Conread position:
               514-771
               

               Cow position:
               chr1:89381494-89381242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               514-772
               

               Cow position:
               chr1:4691810-4691560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               514-773
               

               Cow position:
               chr1:42537077-42537357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 163
               

               Conread position:
               514-786
               

               Cow position:
               chr1:72422183-72422455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               40, 113
               

               Conread position:
               515-652
               

               Cow position:
               chr1:36306898-36306761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               515-668
               

               Cow position:
               chr1:34767516-34767357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               515-681
               

               Cow position:
               chr1:52509539-52509709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               515-681
               

               Cow position:
               chr1:56719563-56719397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               515-682
               

               Cow position:
               chr1:22231873-22231704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 112
               

               Conread position:
               515-720
               

               Cow position:
               chr1:31801698-31801903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 72
               

               Conread position:
               515-730
               

               Cow position:
               chr1:98556895-98557110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               515-748
               

               Cow position:
               chr1:42482422-42482193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 97
               

               Conread position:
               515-749
               

               Cow position:
               chr1:4444617-4444852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               39, 123
               

               Conread position:
               515-749
               

               Cow position:
               chr1:95153095-95152862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               515-750
               

               Cow position:
               chr1:46245513-46245760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               515-750
               

               Cow position:
               chr1:97232193-97231949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               515-759
               

               Cow position:
               chr1:16060786-16061024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               515-761
               

               Cow position:
               chr1:52435497-52435250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 112
               

               Conread position:
               515-762
               

               Cow position:
               chr1:150700-150949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               515-762
               

               Cow position:
               chr1:29474130-29474370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               515-762
               

               Cow position:
               chr1:38419251-38419004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 115
               

               Conread position:
               515-762
               

               Cow position:
               chr1:65103851-65103598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               515-762
               

               Cow position:
               chr1:74751405-74751658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 124
               

               Conread position:
               515-762
               

               Cow position:
               chr1:84103836-84104084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               43, 115
               

               Conread position:
               515-762
               

               Cow position:
               chr1:96081696-96081457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               515-762
               

               Cow position:
               chr1:100823262-100823014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               515-763
               

               Cow position:
               chr1:70538827-70538587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               515-764
               

               Cow position:
               chr1:69265050-69264784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               515-765
               

               Cow position:
               chr1:14759134-14759387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               515-765
               

               Cow position:
               chr1:23186577-23186824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               515-765
               

               Cow position:
               chr1:86110520-86110763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               515-765
               

               Cow position:
               chr1:89076400-89076659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 182
               

               Conread position:
               515-766
               

               Cow position:
               chr1:78097143-78096899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               515-766
               

               Cow position:
               chr1:101177745-101177489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 179
               

               Conread position:
               515-767
               

               Cow position:
               chr1:22192994-22192741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               515-767
               

               Cow position:
               chr1:31607672-31607916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               515-770
               

               Cow position:
               chr1:82880862-82880617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               515-770
               

               Cow position:
               chr1:98912230-98911977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 173
               

               Conread position:
               515-771
               

               Cow position:
               chr1:83072665-83072408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               515-771
               

               Cow position:
               chr1:90904534-90904787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               515-772
               

               Cow position:
               chr1:50432257-50432520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 125
               

               Conread position:
               516-648
               

               Cow position:
               chr1:4303219-4303351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               516-675
               

               Cow position:
               chr1:53457033-53456873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               516-680
               

               Cow position:
               chr1:36625741-36625573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               516-681
               

               Cow position:
               chr1:55260013-55260179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               38, 87
               

               Conread position:
               516-681
               

               Cow position:
               chr1:80385266-80385430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               516-681
               

               Cow position:
               chr1:89146651-89146818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 105
               

               Conread position:
               516-726
               

               Cow position:
               chr1:36018564-36018764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               516-728
               

               Cow position:
               chr1:47467858-47468070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               516-740
               

               Cow position:
               chr1:92792272-92792051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               516-741
               

               Cow position:
               chr1:5010612-5010844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               516-742
               

               Cow position:
               chr1:46693427-46693657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               516-743
               

               Cow position:
               chr1:21954005-21954225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               516-743
               

               Cow position:
               chr1:102768396-102768177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               516-747
               

               Cow position:
               chr1:41137924-41138152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               516-749
               

               Cow position:
               chr1:484243-484477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               516-756
               

               Cow position:
               chr1:45315410-45315653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               38, 113
               

               Conread position:
               516-760
               

               Cow position:
               chr1:71078743-71078981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               516-760
               

               Cow position:
               chr1:93590368-93590607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               516-761
               

               Cow position:
               chr1:47790447-47790684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               516-762
               

               Cow position:
               chr1:86340237-86340487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               516-764
               

               Cow position:
               chr1:15206659-15206897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               516-765
               

               Cow position:
               chr1:28058742-28058993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               516-765
               

               Cow position:
               chr1:49334171-49334418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               516-765
               

               Cow position:
               chr1:53402999-53402765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               516-770
               

               Cow position:
               chr1:31934725-31934476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               516-772
               

               Cow position:
               chr1:61012527-61012280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               516-772
               

               Cow position:
               chr1:71665714-71665966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               516-777
               

               Cow position:
               chr1:34771278-34771541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               516-783
               

               Cow position:
               chr1:36998402-36998140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               517-675
               

               Cow position:
               chr1:1915805-1915964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               517-680
               

               Cow position:
               chr1:33720323-33720159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               517-681
               

               Cow position:
               chr1:3244434-3244268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 111
               

               Conread position:
               517-681
               

               Cow position:
               chr1:69442294-69442461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               517-704
               

               Cow position:
               chr1:71664670-71664862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               15, 109
               

               Conread position:
               517-705
               

               Cow position:
               chr1:3666811-3666997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               517-732
               

               Cow position:
               chr1:70483115-70483327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               517-739
               

               Cow position:
               chr1:4294565-4294344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               517-740
               

               Cow position:
               chr1:1878243-1878019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               517-746
               

               Cow position:
               chr1:21681315-21681544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               517-759
               

               Cow position:
               chr1:47658568-47658325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 111
               

               Conread position:
               517-761
               

               Cow position:
               chr1:10716725-10716476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 181
               

               Conread position:
               517-761
               

               Cow position:
               chr1:84905838-84906085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               517-765
               

               Cow position:
               chr1:46031181-46030931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 112
               

               Conread position:
               517-771
               

               Cow position:
               chr1:81477644-81477903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               518-678
               

               Cow position:
               chr1:47190774-47190935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               518-741
               

               Cow position:
               chr1:53370303-53370083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               518-751
               

               Cow position:
               chr1:85688404-85688166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 155
               

               Conread position:
               518-770
               

               Cow position:
               chr1:77739944-77739688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               518-775
               

               Cow position:
               chr1:48581348-48581092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               518-783
               

               Cow position:
               chr1:96964538-96964269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               519-682
               

               Cow position:
               chr1:83222207-83222040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               519-692
               

               Cow position:
               chr1:43379141-43379315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               519-699
               

               Cow position:
               chr1:79178849-79178668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               519-723
               

               Cow position:
               chr1:1380219-1380013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               519-728
               

               Cow position:
               chr1:1347416-1347624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               519-731
               

               Cow position:
               chr1:731750-731968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               519-731
               

               Cow position:
               chr1:20537420-20537213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               519-742
               

               Cow position:
               chr1:90975858-90976091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 125
               

               Conread position:
               519-743
               

               Cow position:
               chr1:79844697-79844461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 180
               

               Conread position:
               519-746
               

               Cow position:
               chr1:852391-852163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 103
               

               Conread position:
               519-761
               

               Cow position:
               chr1:73545690-73545936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 119
               

               Conread position:
               519-762
               

               Cow position:
               chr1:55230191-55229953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               519-762
               

               Cow position:
               chr1:55428735-55428980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 108
               

               Conread position:
               519-762
               

               Cow position:
               chr1:70422520-70422282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               519-762
               

               Cow position:
               chr1:73457876-73458118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 110
               

               Conread position:
               519-765
               

               Cow position:
               chr1:95835577-95835824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               35, 108
               

               Conread position:
               519-766
               

               Cow position:
               chr1:12464448-12464691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               519-767
               

               Cow position:
               chr1:196786-197033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               519-771
               

               Cow position:
               chr1:43505742-43505497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               519-791
               

               Cow position:
               chr1:22824127-22823858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               520-765
               

               Cow position:
               chr1:48105208-48105457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 173
               

               Conread position:
               520-765
               

               Cow position:
               chr1:101835034-101834793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               521-750
               

               Cow position:
               chr1:16766869-16767095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               521-777
               

               Cow position:
               chr1:73719687-73719423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 174
               

               Conread position:
               523-683
               

               Cow position:
               chr1:57395291-57395452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               31, 96
               

               Conread position:
               523-692
               

               Cow position:
               chr1:42797090-42796924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               48, 31
               

               Conread position:
               523-731
               

               Cow position:
               chr1:84595105-84594896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               523-743
               

               Cow position:
               chr1:29329762-29329537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               16, 169
               

               Conread position:
               523-746
               

               Cow position:
               chr1:71228309-71228086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               523-760
               

               Cow position:
               chr1:11853472-11853706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               523-762
               

               Cow position:
               chr1:81228122-81228357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               523-765
               

               Cow position:
               chr1:10941884-10942124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               523-765
               

               Cow position:
               chr1:10964502-10964262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               523-766
               

               Cow position:
               chr1:38277812-38278055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               524-707
               

               Cow position:
               chr1:79001632-79001816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               524-731
               

               Cow position:
               chr1:81473374-81473163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               524-731
               

               Cow position:
               chr1:87149602-87149807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               524-765
               

               Cow position:
               chr1:71789935-71790174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               524-766
               

               Cow position:
               chr1:81481174-81481410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               525-681
               

               Cow position:
               chr1:54645635-54645484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               526-681
               

               Cow position:
               chr1:50854125-50853965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               526-681
               

               Cow position:
               chr1:90192633-90192473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               526-684
               

               Cow position:
               chr1:98317351-98317511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               526-692
               

               Cow position:
               chr1:100513108-100512942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 96
               

               Conread position:
               526-707
               

               Cow position:
               chr1:22828360-22828538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               526-722
               

               Cow position:
               chr1:53441904-53442095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               526-726
               

               Cow position:
               chr1:77685766-77685968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               526-730
               

               Cow position:
               chr1:85622743-85622538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 102
               

               Conread position:
               526-742
               

               Cow position:
               chr1:7443194-7442972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               5, 107
               

               Conread position:
               526-749
               

               Cow position:
               chr1:8788501-8788281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               526-750
               

               Cow position:
               chr1:6790985-6790764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 96
               

               Conread position:
               526-753
               

               Cow position:
               chr1:68817589-68817811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               526-760
               

               Cow position:
               chr1:95618852-95618620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               526-761
               

               Cow position:
               chr1:42868739-42868958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               526-762
               

               Cow position:
               chr1:43352441-43352677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               526-764
               

               Cow position:
               chr1:17056203-17055968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               526-766
               

               Cow position:
               chr1:37726203-37726447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 165
               

               Conread position:
               526-766
               

               Cow position:
               chr1:61741753-61741994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 177
               

               Conread position:
               526-766
               

               Cow position:
               chr1:64572725-64572487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               526-767
               

               Cow position:
               chr1:31819316-31819079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               526-768
               

               Cow position:
               chr1:101714327-101714091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               526-772
               

               Cow position:
               chr1:5751527-5751277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               526-783
               

               Cow position:
               chr1:19515403-19515666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               527-730
               

               Cow position:
               chr1:58420408-58420212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               527-761
               

               Cow position:
               chr1:64803887-64804124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 163
               

               Conread position:
               527-762
               

               Cow position:
               chr1:60987200-60986965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               528-674
               

               Cow position:
               chr1:64706111-64705963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               26, 99
               

               Conread position:
               528-679
               

               Cow position:
               chr1:83246637-83246484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               528-681
               

               Cow position:
               chr1:67674399-67674546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               528-731
               

               Cow position:
               chr1:1802374-1802171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               528-731
               

               Cow position:
               chr1:98380086-98380289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               528-738
               

               Cow position:
               chr1:81364473-81364261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               528-741
               

               Cow position:
               chr1:4361843-4362065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               528-741
               

               Cow position:
               chr1:99604982-99605189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               528-748
               

               Cow position:
               chr1:10674357-10674142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               528-748
               

               Cow position:
               chr1:90267933-90267712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               528-751
               

               Cow position:
               chr1:79135488-79135272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               528-754
               

               Cow position:
               chr1:97540848-97540618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               528-760
               

               Cow position:
               chr1:50765824-50765591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               528-762
               

               Cow position:
               chr1:52139418-52139657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               528-762
               

               Cow position:
               chr1:61846367-61846122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 171
               

               Conread position:
               528-762
               

               Cow position:
               chr1:75250321-75250092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 99
               

               Conread position:
               528-764
               

               Cow position:
               chr1:60045196-60044962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               528-765
               

               Cow position:
               chr1:86113192-86113426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               528-766
               

               Cow position:
               chr1:4055654-4055425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               528-766
               

               Cow position:
               chr1:41056889-41056650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               528-768
               

               Cow position:
               chr1:79719017-79718782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               528-771
               

               Cow position:
               chr1:81858692-81858937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               528-777
               

               Cow position:
               chr1:76612923-76613173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               528-777
               

               Cow position:
               chr1:102266061-102266306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               529-681
               

               Cow position:
               chr1:11107455-11107301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               529-692
               

               Cow position:
               chr1:26984220-26984056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               529-717
               

               Cow position:
               chr1:74919767-74919957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 156
               

               Conread position:
               529-730
               

               Cow position:
               chr1:31340559-31340762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 94
               

               Conread position:
               529-732
               

               Cow position:
               chr1:47886274-47886472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               529-736
               

               Cow position:
               chr1:87888598-87888392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               529-752
               

               Cow position:
               chr1:101916378-101916153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               529-761
               

               Cow position:
               chr1:70227483-70227716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               529-762
               

               Cow position:
               chr1:74929500-74929740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 109
               

               Conread position:
               529-771
               

               Cow position:
               chr1:4701463-4701702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               530-692
               

               Cow position:
               chr1:90879534-90879689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               530-726
               

               Cow position:
               chr1:94823182-94823379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               530-735
               

               Cow position:
               chr1:63994348-63994552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               530-767
               

               Cow position:
               chr1:35555122-35554881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               530-776
               

               Cow position:
               chr1:26934061-26934306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 109
               

               Conread position:
               531-682
               

               Cow position:
               chr1:50906475-50906624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 78
               

               Conread position:
               531-730
               

               Cow position:
               chr1:65030276-65030076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               531-732
               

               Cow position:
               chr1:71945874-71946077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 158
               

               Conread position:
               531-741
               

               Cow position:
               chr1:7966053-7965851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 67
               

               Conread position:
               531-752
               

               Cow position:
               chr1:89509725-89509934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               531-753
               

               Cow position:
               chr1:11172574-11172361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               531-760
               

               Cow position:
               chr1:82513146-82513374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               531-761
               

               Cow position:
               chr1:25735074-25734846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               531-761
               

               Cow position:
               chr1:81568823-81569050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               531-761
               

               Cow position:
               chr1:85818452-85818229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               531-762
               

               Cow position:
               chr1:5597006-5597231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               531-762
               

               Cow position:
               chr1:49824859-49825089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               531-762
               

               Cow position:
               chr1:74083982-74084211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               531-762
               

               Cow position:
               chr1:74832634-74832398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 115
               

               Conread position:
               531-765
               

               Cow position:
               chr1:61005351-61005587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               531-766
               

               Cow position:
               chr1:48213939-48214182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               531-766
               

               Cow position:
               chr1:88913526-88913292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               531-766
               

               Cow position:
               chr1:90621300-90621534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               531-767
               

               Cow position:
               chr1:67654119-67654349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               531-767
               

               Cow position:
               chr1:71253328-71253581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               23, 181
               

               Conread position:
               531-770
               

               Cow position:
               chr1:3324080-3323837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               531-771
               

               Cow position:
               chr1:91023262-91023499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               531-772
               

               Cow position:
               chr1:61885118-61884879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               531-772
               

               Cow position:
               chr1:82936399-82936631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               531-772
               

               Cow position:
               chr1:84811735-84811972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               532-674
               

               Cow position:
               chr1:98742221-98742081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 74
               

               Conread position:
               532-681
               

               Cow position:
               chr1:30028027-30028175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               532-681
               

               Cow position:
               chr1:39095690-39095545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               532-717
               

               Cow position:
               chr1:48301246-48301429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               532-719
               

               Cow position:
               chr1:42775111-42774930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               532-722
               

               Cow position:
               chr1:5872569-5872762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               532-725
               

               Cow position:
               chr1:19599155-19599347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               532-728
               

               Cow position:
               chr1:33206669-33206870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 159
               

               Conread position:
               532-729
               

               Cow position:
               chr1:63461083-63460888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               532-729
               

               Cow position:
               chr1:81638744-81638558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               532-730
               

               Cow position:
               chr1:24656461-24656254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 122
               

               Conread position:
               532-730
               

               Cow position:
               chr1:46172810-46172614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               532-730
               

               Cow position:
               chr1:73534437-73534632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               532-730
               

               Cow position:
               chr1:99637046-99637245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 98
               

               Conread position:
               532-731
               

               Cow position:
               chr1:55685773-55685970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               532-735
               

               Cow position:
               chr1:62469263-62469065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               532-738
               

               Cow position:
               chr1:54569906-54569698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               532-739
               

               Cow position:
               chr1:56913327-56913529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               532-741
               

               Cow position:
               chr1:76518629-76518420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               532-749
               

               Cow position:
               chr1:68688784-68688573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               532-750
               

               Cow position:
               chr1:3605684-3605897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               133, 32
               

               Conread position:
               532-750
               

               Cow position:
               chr1:78794031-78794242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               532-751
               

               Cow position:
               chr1:25383874-25383657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               532-760
               

               Cow position:
               chr1:79164877-79165103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               532-760
               

               Cow position:
               chr1:83972969-83972743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               532-760
               

               Cow position:
               chr1:91811984-91811761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               532-761
               

               Cow position:
               chr1:628173-627938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               532-761
               

               Cow position:
               chr1:22730938-22730712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               532-761
               

               Cow position:
               chr1:52496973-52496750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               532-761
               

               Cow position:
               chr1:54267733-54267959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               532-761
               

               Cow position:
               chr1:75745065-75744838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               532-761
               

               Cow position:
               chr1:89872173-89871945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               532-761
               

               Cow position:
               chr1:98422209-98421978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               532-761
               

               Cow position:
               chr1:102468417-102468640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               532-762
               

               Cow position:
               chr1:3923599-3923823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               532-762
               

               Cow position:
               chr1:12222399-12222630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               532-762
               

               Cow position:
               chr1:20104471-20104241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               532-762
               

               Cow position:
               chr1:54156529-54156757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               532-762
               

               Cow position:
               chr1:54258774-54258544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               532-762
               

               Cow position:
               chr1:63992129-63992359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               532-762
               

               Cow position:
               chr1:78066338-78066559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               532-762
               

               Cow position:
               chr1:81290709-81290484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               532-762
               

               Cow position:
               chr1:87095006-87095237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               532-762
               

               Cow position:
               chr1:92197659-92197431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               532-762
               

               Cow position:
               chr1:102648485-102648254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               532-765
               

               Cow position:
               chr1:16961789-16962036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               532-765
               

               Cow position:
               chr1:21578015-21577782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               532-765
               

               Cow position:
               chr1:34160033-34159809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               532-765
               

               Cow position:
               chr1:88360090-88359852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 161
               

               Conread position:
               532-766
               

               Cow position:
               chr1:1956133-1956361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               532-766
               

               Cow position:
               chr1:54206614-54206842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               532-766
               

               Cow position:
               chr1:75189993-75189758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               532-766
               

               Cow position:
               chr1:77425317-77425075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 173
               

               Conread position:
               532-766
               

               Cow position:
               chr1:89388548-89388312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               532-766
               

               Cow position:
               chr1:92524223-92523984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               532-767
               

               Cow position:
               chr1:37917974-37918220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               532-767
               

               Cow position:
               chr1:76037307-76037547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               532-767
               

               Cow position:
               chr1:78811243-78811011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               532-768
               

               Cow position:
               chr1:4391063-4391308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               532-770
               

               Cow position:
               chr1:50930775-50931005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               532-771
               

               Cow position:
               chr1:91065952-91066183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               532-772
               

               Cow position:
               chr1:816192-816444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               26, 169
               

               Conread position:
               532-773
               

               Cow position:
               chr1:44507173-44506940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               532-787
               

               Cow position:
               chr1:55753014-55753264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               532-787
               

               Cow position:
               chr1:72092418-72092671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               533-732
               

               Cow position:
               chr1:60603366-60603570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 156
               

               Conread position:
               533-743
               

               Cow position:
               chr1:73551298-73551514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 158
               

               Conread position:
               533-746
               

               Cow position:
               chr1:51860360-51860568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               533-750
               

               Cow position:
               chr1:6440342-6440560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               533-759
               

               Cow position:
               chr1:100852906-100852689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               533-762
               

               Cow position:
               chr1:62964472-62964242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               533-762
               

               Cow position:
               chr1:79640085-79640311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               533-765
               

               Cow position:
               chr1:48206336-48206558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               533-770
               

               Cow position:
               chr1:43855493-43855273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               534-673
               

               Cow position:
               chr1:8134128-8133988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               534-730
               

               Cow position:
               chr1:68710487-68710286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               534-731
               

               Cow position:
               chr1:78029823-78030024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               534-739
               

               Cow position:
               chr1:33330899-33331091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               534-754
               

               Cow position:
               chr1:6031824-6031609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               534-762
               

               Cow position:
               chr1:19970391-19970617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               534-768
               

               Cow position:
               chr1:46143264-46143489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               534-768
               

               Cow position:
               chr1:57089476-57089710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               534-770
               

               Cow position:
               chr1:100474442-100474203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               535-725
               

               Cow position:
               chr1:84815336-84815143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               536-726
               

               Cow position:
               chr1:64458173-64457978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               536-730
               

               Cow position:
               chr1:89297906-89298101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               536-730
               

               Cow position:
               chr1:89301515-89301710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               536-735
               

               Cow position:
               chr1:95049664-95049860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               536-750
               

               Cow position:
               chr1:2075149-2075361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               536-750
               

               Cow position:
               chr1:6381977-6381761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               536-750
               

               Cow position:
               chr1:28563360-28563577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               536-750
               

               Cow position:
               chr1:67585752-67585549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               536-753
               

               Cow position:
               chr1:759211-759432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 153
               

               Conread position:
               536-757
               

               Cow position:
               chr1:2462572-2462365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               536-759
               

               Cow position:
               chr1:76735278-76735499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               536-761
               

               Cow position:
               chr1:86056877-86057093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               536-762
               

               Cow position:
               chr1:24777783-24778012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               536-762
               

               Cow position:
               chr1:53521106-53520888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               536-765
               

               Cow position:
               chr1:30983291-30983518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 154
               

               Conread position:
               536-766
               

               Cow position:
               chr1:35671737-35671514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               536-766
               

               Cow position:
               chr1:73721565-73721332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               536-767
               

               Cow position:
               chr1:20950918-20950688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               536-767
               

               Cow position:
               chr1:62519567-62519336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               536-767
               

               Cow position:
               chr1:89449099-89448872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 53
               

               Conread position:
               536-768
               

               Cow position:
               chr1:41027273-41027045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               536-768
               

               Cow position:
               chr1:43872108-43872348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 159
               

               Conread position:
               536-770
               

               Cow position:
               chr1:45555566-45555334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               536-770
               

               Cow position:
               chr1:49980909-49980678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               536-771
               

               Cow position:
               chr1:65318778-65318543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               537-720
               

               Cow position:
               chr1:47966820-47967004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               537-731
               

               Cow position:
               chr1:31231540-31231734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               537-759
               

               Cow position:
               chr1:8818-8595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               537-781
               

               Cow position:
               chr1:63530759-63530514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               538-698
               

               Cow position:
               chr1:79169954-79170112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               538-728
               

               Cow position:
               chr1:83606257-83606439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               538-746
               

               Cow position:
               chr1:101280539-101280741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               538-762
               

               Cow position:
               chr1:72813817-72813593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               538-769
               

               Cow position:
               chr1:34856425-34856656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               538-771
               

               Cow position:
               chr1:79004175-79003943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               540-771
               

               Cow position:
               chr1:95072540-95072298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 157
               

               Conread position:
               540-771
               

               Cow position:
               chr1:98512134-98511898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               541-691
               

               Cow position:
               chr1:23050631-23050480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               541-761
               

               Cow position:
               chr1:98467998-98467782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               542-749
               

               Cow position:
               chr1:22461047-22461248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               543-716
               

               Cow position:
               chr1:77404709-77404887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 149
               

               Conread position:
               543-744
               

               Cow position:
               chr1:23633733-23633937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               543-746
               

               Cow position:
               chr1:49082940-49082736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               543-763
               

               Cow position:
               chr1:71770112-71770336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 95
               

               Conread position:
               544-720
               

               Cow position:
               chr1:61134608-61134430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               544-724
               

               Cow position:
               chr1:40181428-40181610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               544-728
               

               Cow position:
               chr1:81668619-81668806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 143
               

               Conread position:
               544-771
               

               Cow position:
               chr1:2972113-2971883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               544-775
               

               Cow position:
               chr1:78810073-78809841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               545-681
               

               Cow position:
               chr1:22394481-22394618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               552-760
               

               Cow position:
               chr1:93528877-93528678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               552-762
               

               Cow position:
               chr1:43388871-43389070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               552-763
               

               Cow position:
               chr1:98031098-98030897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               202, 14
               

               Conread position:
               552-772
               

               Cow position:
               chr1:2975806-2976028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               553-762
               

               Cow position:
               chr1:70297464-70297255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               554-738
               

               Cow position:
               chr1:69691531-69691714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               557-673
               

               Cow position:
               chr1:31725608-31725494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               557-681
               

               Cow position:
               chr1:4573903-4573780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               557-769
               

               Cow position:
               chr1:13637487-13637690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               558-772
               

               Cow position:
               chr1:87197997-87197786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               562-765
               

               Cow position:
               chr1:89786084-89785884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               568-717
               

               Cow position:
               chr1:23373027-23372881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               568-750
               

               Cow position:
               chr1:49433095-49433275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               568-760
               

               Cow position:
               chr1:79660232-79660423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               568-765
               

               Cow position:
               chr1:1053748-1053555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               569-761
               

               Cow position:
               chr1:52487813-52488002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               569-761
               

               Cow position:
               chr1:77425446-77425635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               571-766
               

               Cow position:
               chr1:54625097-54624902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               156, 64
               

               Conread position:
               576-731
               

               Cow position:
               chr1:31630125-31630279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               576-731
               

               Cow position:
               chr1:67539720-67539566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               132, 48
               

               Conread position:
               576-753
               

               Cow position:
               chr1:19962207-19962039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               576-762
               

               Cow position:
               chr1:11913716-11913902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               576-770
               

               Cow position:
               chr1:11729329-11729145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               585-770
               

               Cow position:
               chr1:4032784-4032599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               170, 39
               

               Conread position:
               588-770
               

               Cow position:
               chr1:7971563-7971380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 96
               

               Conread position:
               589-762
               

               Cow position:
               chr1:6964931-6965109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               590-762
               

               Cow position:
               chr1:65881954-65881783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               590-765
               

               Cow position:
               chr1:80841791-80841620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               593-751
               

               Cow position:
               chr1:92603163-92603007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               595-730
               

               Cow position:
               chr1:46100698-46100831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-750
               

               Cow position:
               chr1:19304712-19304561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-761
               

               Cow position:
               chr1:95153364-95153201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-764
               

               Cow position:
               chr1:90868305-90868466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-764
               

               Cow position:
               chr1:98551861-98551694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               595-765
               

               Cow position:
               chr1:8347265-8347097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-767
               

               Cow position:
               chr1:81580319-81580150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-769
               

               Cow position:
               chr1:58037162-58036989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               595-770
               

               Cow position:
               chr1:68672460-68672628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               595-771
               

               Cow position:
               chr1:47233336-47233510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               596-761
               

               Cow position:
               chr1:28470973-28470804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               596-771
               

               Cow position:
               chr1:89741852-89742032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               597-762
               

               Cow position:
               chr1:81613532-81613366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               600-762
               

               Cow position:
               chr1:84768742-84768902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               600-771
               

               Cow position:
               chr1:98576184-98576015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               600-773
               

               Cow position:
               chr1:54157431-54157260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               601-759
               

               Cow position:
               chr1:74928020-74927864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               601-760
               

               Cow position:
               chr1:20864189-20864036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               601-778
               

               Cow position:
               chr1:32001183-32001350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               602-764
               

               Cow position:
               chr1:92989725-92989563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               153, 23
               

               Conread position:
               602-767
               

               Cow position:
               chr1:84255902-84255739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               602-771
               

               Cow position:
               chr1:80336113-80336281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               603-767
               

               Cow position:
               chr1:95974535-95974374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               603-772
               

               Cow position:
               chr1:52039770-52039604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               152, 21
               

               Conread position:
               607-767
               

               Cow position:
               chr1:42360418-42360259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               609-746
               

               Cow position:
               chr1:42178873-42178738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               614-767
               

               Cow position:
               chr1:95177060-95176911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               619-762
               

               Cow position:
               chr1:85712558-85712417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               628-777
               

               Cow position:
               chr1:89350075-89349925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 59
               
Show alignments to all cow chromosomes.
Conread position:	444-762
Cow position:	chr1:38706558-38706877 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	225
Alignm E-value:	8.00141e-43
Alignm gaps (pig, cow):	17, 123
Conread position:	460-750
Cow position:	chr1:86061698-86061996 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	213
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	11, 34
Conread position:	462-738
Cow position:	chr1:32014466-32014199 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	195
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	76, 14
Conread position:	476-680
Cow position:	chr1:73374833-73375044 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	150
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	60, 17
Conread position:	480-681
Cow position:	chr1:73397811-73398017 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	157
Alignm E-value:	9e-33
Alignm gaps (pig, cow):	15, 7
Conread position:	481-678
Cow position:	chr1:74304825-74305022 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	139
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	73, 21
Conread position:	482-731
Cow position:	chr1:92915761-92915514 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	173
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	47, 12
Conread position:	483-731
Cow position:	chr1:12090596-12090358 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	170
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	19, 73
Conread position:	483-742
Cow position:	chr1:11488907-11489164 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	187
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	14, 28
Conread position:	483-762
Cow position:	chr1:6228337-6228607 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	197
Alignm E-value:	8e-32
Alignm gaps (pig, cow):	88, 18
Conread position:	485-727
Cow position:	chr1:101883139-101883382 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	160
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	69, 137
Conread position:	486-765
Cow position:	chr1:98046304-98046026 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	187
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	16, 110
Conread position:	487-762
Cow position:	chr1:78092295-78092014 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	195
Alignm E-value:	9e-33
Alignm gaps (pig, cow):	13, 145
Conread position:	487-770
Cow position:	chr1:31357265-31357540 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	185
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	25, 56
Conread position:	488-762
Cow position:	chr1:67529306-67529032 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	192
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	25, 108
Conread position:	489-724
Cow position:	chr1:46939624-46939870 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	170
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	31, 10
Conread position:	489-777
Cow position:	chr1:81391171-81390887 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	216
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	48, 34
Conread position:	490-729
Cow position:	chr1:83677081-83677317 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	169
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	64, 25
Conread position:	492-767
Cow position:	chr1:44946994-44946725 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	190
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	11, 77
Conread position:	493-681
Cow position:	chr1:19384212-19384399 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	139
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	16, 31