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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01E100015.5
        

               
Conread position:
               
465-731
               

               
Cow position:
               
chr13:3153471-3153733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
468-681
               

               
Cow position:
               
chr13:13504545-13504333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
470-746
               

               
Cow position:
               
chr13:37986023-37985746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 157
               

               
Conread position:
               
481-766
               

               
Cow position:
               
chr13:17497953-17498234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
483-681
               

               
Cow position:
               
chr13:42203767-42203959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
483-723
               

               
Cow position:
               
chr13:16163333-16163557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
484-726
               

               
Cow position:
               
chr13:8537552-8537800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
486-691
               

               
Cow position:
               
chr13:10055151-10055365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
486-760
               

               
Cow position:
               
chr13:38873216-38872936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
487-767
               

               
Cow position:
               
chr13:44003438-44003718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
488-762
               

               
Cow position:
               
chr13:55582939-55583208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
490-768
               

               
Cow position:
               
chr13:22115426-22115715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
493-761
               

               
Cow position:
               
chr13:11808335-11808589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
493-766
               

               
Cow position:
               
chr13:585127-584856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
495-751
               

               
Cow position:
               
chr13:12923623-12923877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
496-762
               

               
Cow position:
               
chr13:6860923-6861195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 193
               

               
Conread position:
               
498-731
               

               
Cow position:
               
chr13:20088964-20088732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
499-681
               

               
Cow position:
               
chr13:42613844-42614018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
499-704
               

               
Cow position:
               
chr13:17994617-17994417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
499-737
               

               
Cow position:
               
chr13:54236564-54236792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
499-750
               

               
Cow position:
               
chr13:16907970-16908219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
499-766
               

               
Cow position:
               
chr13:24229969-24230232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
500-728
               

               
Cow position:
               
chr13:33854927-33854704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
500-762
               

               
Cow position:
               
chr13:34281436-34281689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
502-756
               

               
Cow position:
               
chr13:57770227-57769981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
503-762
               

               
Cow position:
               
chr13:620491-620241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
503-766
               

               
Cow position:
               
chr13:54286964-54286712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
503-767
               

               
Cow position:
               
chr13:151729-151983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
258, 29
               

               
Conread position:
               
503-768
               

               
Cow position:
               
chr13:45439292-45439542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
503-783
               

               
Cow position:
               
chr13:2340738-2341020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
505-762
               

               
Cow position:
               
chr13:18197847-18197595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
506-674
               

               
Cow position:
               
chr13:39775731-39775557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
506-683
               

               
Cow position:
               
chr13:2529194-2529014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
507-757
               

               
Cow position:
               
chr13:49356290-49356040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
507-760
               

               
Cow position:
               
chr13:28071637-28071885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
507-763
               

               
Cow position:
               
chr13:49204775-49205017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
229, 19
               

               
Conread position:
               
508-708
               

               
Cow position:
               
chr13:53357592-53357793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr13:28587984-28587808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
509-682
               

               
Cow position:
               
chr13:15868873-15869049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
509-717
               

               
Cow position:
               
chr13:52464505-52464710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
509-722
               

               
Cow position:
               
chr13:21246947-21246735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
509-732
               

               
Cow position:
               
chr13:8637458-8637682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
509-753
               

               
Cow position:
               
chr13:51695732-51695973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
509-761
               

               
Cow position:
               
chr13:23805258-23804994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
509-762
               

               
Cow position:
               
chr13:15257602-15257355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
509-762
               

               
Cow position:
               
chr13:15996799-15997048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
510-681
               

               
Cow position:
               
chr13:20214200-20214373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
511-679
               

               
Cow position:
               
chr13:33518195-33518024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
511-681
               

               
Cow position:
               
chr13:29805247-29805083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
511-733
               

               
Cow position:
               
chr13:9124691-9124909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
511-734
               

               
Cow position:
               
chr13:41115607-41115828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
511-760
               

               
Cow position:
               
chr13:55765410-55765166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
511-761
               

               
Cow position:
               
chr13:15289155-15288912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr13:52893917-52894162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
511-767
               

               
Cow position:
               
chr13:26698729-26698480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
511-770
               

               
Cow position:
               
chr13:52641186-52640922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
511-771
               

               
Cow position:
               
chr13:54701944-54702209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
511-772
               

               
Cow position:
               
chr13:18058481-18058225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
512-681
               

               
Cow position:
               
chr13:29507376-29507551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
512-761
               

               
Cow position:
               
chr13:41157164-41157418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 180
               

               
Conread position:
               
512-762
               

               
Cow position:
               
chr13:17611780-17611538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
512-766
               

               
Cow position:
               
chr13:9587816-9587568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
513-678
               

               
Cow position:
               
chr13:55327204-55327372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
513-682
               

               
Cow position:
               
chr13:26377652-26377481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
513-729
               

               
Cow position:
               
chr13:37555101-37554893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
513-761
               

               
Cow position:
               
chr13:15041706-15041460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
513-763
               

               
Cow position:
               
chr13:25941493-25941249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
513-765
               

               
Cow position:
               
chr13:14927034-14927277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
514-683
               

               
Cow position:
               
chr13:2776627-2776796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
514-698
               

               
Cow position:
               
chr13:23823261-23823084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
514-713
               

               
Cow position:
               
chr13:13780943-13781145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
514-762
               

               
Cow position:
               
chr13:20360047-20360293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
514-767
               

               
Cow position:
               
chr13:14063755-14063501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
514-770
               

               
Cow position:
               
chr13:6616994-6616731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
515-678
               

               
Cow position:
               
chr13:53847349-53847190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:3388023-3387854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:11543330-11543503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:17975191-17975029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:20789749-20789583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:20854689-20854522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:28081488-28081656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
515-692
               

               
Cow position:
               
chr13:5659995-5659823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
515-692
               

               
Cow position:
               
chr13:20378547-20378376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
515-692
               

               
Cow position:
               
chr13:28605625-28605447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
515-699
               

               
Cow position:
               
chr13:15162866-15162681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
515-716
               

               
Cow position:
               
chr13:26317121-26316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
515-730
               

               
Cow position:
               
chr13:11146823-11147039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
515-731
               

               
Cow position:
               
chr13:11410478-11410697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
515-741
               

               
Cow position:
               
chr13:50768360-50768589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
515-747
               

               
Cow position:
               
chr13:10279692-10279914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
515-751
               

               
Cow position:
               
chr13:62369433-62369671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr13:10220726-10220976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr13:15993153-15993399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr13:3961614-3961864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 176
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr13:14644821-14645065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr13:15083431-15083673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr13:25579422-25579174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr13:55080907-55081156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr13:1363454-1363711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr13:5758563-5758322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr13:20893874-20893618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
515-767
               

               
Cow position:
               
chr13:19278863-19279114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
515-767
               

               
Cow position:
               
chr13:21981200-21980955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
515-767
               

               
Cow position:
               
chr13:38284199-38283959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
515-767
               

               
Cow position:
               
chr13:45352797-45353052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
515-768
               

               
Cow position:
               
chr13:17823182-17822935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
515-770
               

               
Cow position:
               
chr13:43595331-43595089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
515-771
               

               
Cow position:
               
chr13:20880055-20879802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
515-771
               

               
Cow position:
               
chr13:37775436-37775184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
515-772
               

               
Cow position:
               
chr13:37069114-37069369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
515-783
               

               
Cow position:
               
chr13:62238534-62238800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
515-790
               

               
Cow position:
               
chr13:49393179-49392897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
516-681
               

               
Cow position:
               
chr13:8682223-8682389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
516-685
               

               
Cow position:
               
chr13:43102752-43102921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
516-714
               

               
Cow position:
               
chr13:62252074-62251878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
516-725
               

               
Cow position:
               
chr13:369359-369146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
516-741
               

               
Cow position:
               
chr13:20137590-20137816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
516-747
               

               
Cow position:
               
chr13:10727131-10727363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
516-749
               

               
Cow position:
               
chr13:32017745-32017511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
516-750
               

               
Cow position:
               
chr13:28536550-28536320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr13:27180808-27181055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
516-765
               

               
Cow position:
               
chr13:32282898-32283145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
516-767
               

               
Cow position:
               
chr13:46111735-46111984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
516-771
               

               
Cow position:
               
chr13:40541340-40541082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
516-771
               

               
Cow position:
               
chr13:54389243-54388997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
246, 21
               

               
Conread position:
               
517-663
               

               
Cow position:
               
chr13:52929203-52929351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
517-675
               

               
Cow position:
               
chr13:8229924-8230083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
517-680
               

               
Cow position:
               
chr13:17624089-17624255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
517-692
               

               
Cow position:
               
chr13:14351356-14351526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
517-704
               

               
Cow position:
               
chr13:1339371-1339185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
517-706
               

               
Cow position:
               
chr13:19177938-19178136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
517-737
               

               
Cow position:
               
chr13:24094544-24094328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
517-751
               

               
Cow position:
               
chr13:30315273-30315510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr13:21110441-21110697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
517-764
               

               
Cow position:
               
chr13:15239742-15239500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
517-765
               

               
Cow position:
               
chr13:40490989-40491232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
517-771
               

               
Cow position:
               
chr13:11103436-11103169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
517-772
               

               
Cow position:
               
chr13:21866861-21866605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
517-772
               

               
Cow position:
               
chr13:50457623-50457884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 174
               

               
Conread position:
               
517-777
               

               
Cow position:
               
chr13:18994898-18995154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
518-681
               

               
Cow position:
               
chr13:28695631-28695794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
518-730
               

               
Cow position:
               
chr13:34533156-34532950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
518-730
               

               
Cow position:
               
chr13:37030122-37030324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
518-743
               

               
Cow position:
               
chr13:4790349-4790122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
518-761
               

               
Cow position:
               
chr13:34873357-34873602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
518-762
               

               
Cow position:
               
chr13:25495784-25496019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
519-692
               

               
Cow position:
               
chr13:22729632-22729458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
519-731
               

               
Cow position:
               
chr13:13797044-13796828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
519-753
               

               
Cow position:
               
chr13:9906501-9906740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
519-768
               

               
Cow position:
               
chr13:12876202-12875955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
520-770
               

               
Cow position:
               
chr13:2773891-2774155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
521-761
               

               
Cow position:
               
chr13:48409143-48409392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
523-681
               

               
Cow position:
               
chr13:40483203-40483045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
523-743
               

               
Cow position:
               
chr13:14795982-14796200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
523-761
               

               
Cow position:
               
chr13:28552364-28552601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
523-762
               

               
Cow position:
               
chr13:14575993-14576224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
523-763
               

               
Cow position:
               
chr13:19033333-19033571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
523-767
               

               
Cow position:
               
chr13:10925145-10924903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
524-663
               

               
Cow position:
               
chr13:43577767-43577907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
524-692
               

               
Cow position:
               
chr13:43576790-43576958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
524-746
               

               
Cow position:
               
chr13:21127562-21127343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 164
               

               
Conread position:
               
524-750
               

               
Cow position:
               
chr13:21275635-21275861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
524-772
               

               
Cow position:
               
chr13:20534675-20534921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
525-692
               

               
Cow position:
               
chr13:28376782-28376616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
525-729
               

               
Cow position:
               
chr13:37517407-37517196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
525-762
               

               
Cow position:
               
chr13:38329398-38329630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
526-680
               

               
Cow position:
               
chr13:242413-242568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
526-680
               

               
Cow position:
               
chr13:16476635-16476790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
526-682
               

               
Cow position:
               
chr13:29665797-29665956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
526-692
               

               
Cow position:
               
chr13:20520090-20520259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 161
               

               
Conread position:
               
526-716
               

               
Cow position:
               
chr13:37946605-37946421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr13:19006648-19006451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
526-737
               

               
Cow position:
               
chr13:30148777-30148574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
526-750
               

               
Cow position:
               
chr13:26093393-26093624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
526-751
               

               
Cow position:
               
chr13:47243773-47243552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
526-753
               

               
Cow position:
               
chr13:57002503-57002731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
526-760
               

               
Cow position:
               
chr13:5263500-5263269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr13:13088813-13089039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr13:47676156-47675921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr13:49823804-49824043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr13:54128819-54128582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
526-764
               

               
Cow position:
               
chr13:55161991-55162228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
526-764
               

               
Cow position:
               
chr13:60509344-60509104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
526-765
               

               
Cow position:
               
chr13:45023442-45023194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
526-767
               

               
Cow position:
               
chr13:48597690-48597926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
526-770
               

               
Cow position:
               
chr13:8362968-8362728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
527-750
               

               
Cow position:
               
chr13:34729059-34728845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
528-675
               

               
Cow position:
               
chr13:24591377-24591525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
528-678
               

               
Cow position:
               
chr13:55007987-55007841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
528-681
               

               
Cow position:
               
chr13:23399549-23399700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
528-698
               

               
Cow position:
               
chr13:16711129-16711299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
528-698
               

               
Cow position:
               
chr13:46298971-46298806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
528-713
               

               
Cow position:
               
chr13:48126887-48127073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
528-734
               

               
Cow position:
               
chr13:20042481-20042279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
528-741
               

               
Cow position:
               
chr13:17058073-17057855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
528-742
               

               
Cow position:
               
chr13:8699961-8699743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
528-743
               

               
Cow position:
               
chr13:42849347-42849138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
528-746
               

               
Cow position:
               
chr13:26100171-26100393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
528-750
               

               
Cow position:
               
chr13:6442324-6442108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
528-759
               

               
Cow position:
               
chr13:20115027-20115265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
528-760
               

               
Cow position:
               
chr13:2776067-2776300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-761
               

               
Cow position:
               
chr13:20784377-20784603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
528-761
               

               
Cow position:
               
chr13:37593163-37592933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
528-762
               

               
Cow position:
               
chr13:21288303-21288071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
528-765
               

               
Cow position:
               
chr13:20174520-20174766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
528-765
               

               
Cow position:
               
chr13:21171789-21171552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr13:7076023-7076274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr13:17114600-17114360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr13:55674427-55674189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
528-771
               

               
Cow position:
               
chr13:17350126-17350375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
529-681
               

               
Cow position:
               
chr13:46391139-46391289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
529-750
               

               
Cow position:
               
chr13:39826339-39826556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
529-767
               

               
Cow position:
               
chr13:25978410-25978172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
530-653
               

               
Cow position:
               
chr13:30809590-30809467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
530-746
               

               
Cow position:
               
chr13:33256282-33256494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
530-750
               

               
Cow position:
               
chr13:10989290-10989072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
530-766
               

               
Cow position:
               
chr13:50646844-50646617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
530-770
               

               
Cow position:
               
chr13:35659539-35659781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
531-679
               

               
Cow position:
               
chr13:53619786-53619936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
531-692
               

               
Cow position:
               
chr13:23478686-23478846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
531-722
               

               
Cow position:
               
chr13:6113746-6113552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
531-722
               

               
Cow position:
               
chr13:16099343-16099147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
531-741
               

               
Cow position:
               
chr13:28439202-28439403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
531-744
               

               
Cow position:
               
chr13:53850606-53850820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
531-764
               

               
Cow position:
               
chr13:37614412-37614175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
531-765
               

               
Cow position:
               
chr13:37818959-37818737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
531-766
               

               
Cow position:
               
chr13:54582660-54582891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr13:20473889-20473662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
532-680
               

               
Cow position:
               
chr13:15114254-15114404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-681
               

               
Cow position:
               
chr13:10986722-10986567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
532-681
               

               
Cow position:
               
chr13:54128044-54127893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
532-697
               

               
Cow position:
               
chr13:21955283-21955116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
532-707
               

               
Cow position:
               
chr13:14543922-14544094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
532-715
               

               
Cow position:
               
chr13:23685216-23685032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-716
               

               
Cow position:
               
chr13:43342354-43342536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-717
               

               
Cow position:
               
chr13:22046223-22046039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
532-717
               

               
Cow position:
               
chr13:25521137-25520946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
532-720
               

               
Cow position:
               
chr13:21280714-21280525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr13:53865422-53865619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
532-732
               

               
Cow position:
               
chr13:17845271-17845472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
532-735
               

               
Cow position:
               
chr13:13283125-13283334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 188
               

               
Conread position:
               
532-739
               

               
Cow position:
               
chr13:43788061-43787846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
532-739
               

               
Cow position:
               
chr13:43839900-43839685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
532-746
               

               
Cow position:
               
chr13:10522726-10522932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
532-746
               

               
Cow position:
               
chr13:17813258-17813469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
532-746
               

               
Cow position:
               
chr13:48222762-48222550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
532-747
               

               
Cow position:
               
chr13:7059245-7059461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-748
               

               
Cow position:
               
chr13:8450120-8450330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
532-751
               

               
Cow position:
               
chr13:43183031-43183252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
532-751
               

               
Cow position:
               
chr13:45593710-45593921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
532-753
               

               
Cow position:
               
chr13:15061703-15061476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
532-753
               

               
Cow position:
               
chr13:20497429-20497657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-758
               

               
Cow position:
               
chr13:19883247-19883027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
532-760
               

               
Cow position:
               
chr13:13775466-13775230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
532-760
               

               
Cow position:
               
chr13:42200407-42200631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr13:54145694-54145463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:1155918-1155690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:15193102-15192874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:20314838-20314608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:21170315-21170542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:26262005-26261774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:46515846-46516075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr13:62007894-62008121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
532-763
               

               
Cow position:
               
chr13:14411678-14411910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-763
               

               
Cow position:
               
chr13:46525642-46525413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
532-765
               

               
Cow position:
               
chr13:15195414-15195192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
532-765
               

               
Cow position:
               
chr13:30258635-30258868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
532-765
               

               
Cow position:
               
chr13:41806563-41806791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr13:25695980-25695750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr13:3315899-3315657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr13:19223438-19223669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr13:23961020-23960787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr13:25817316-25817547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr13:28440746-28440517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr13:56035070-56034839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
532-770
               

               
Cow position:
               
chr13:7333225-7332979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
532-771
               

               
Cow position:
               
chr13:12670665-12670428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr13:17855154-17855394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr13:44278133-44278374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
532-777
               

               
Cow position:
               
chr13:18166519-18166761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
532-777
               

               
Cow position:
               
chr13:52055806-52055564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
532-791
               

               
Cow position:
               
chr13:57986147-57985894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
533-678
               

               
Cow position:
               
chr13:8423194-8423336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
533-765
               

               
Cow position:
               
chr13:37621587-37621342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
533-770
               

               
Cow position:
               
chr13:14940585-14940829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
534-724
               

               
Cow position:
               
chr13:10534877-10535062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
534-777
               

               
Cow position:
               
chr13:19598876-19598635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
535-770
               

               
Cow position:
               
chr13:20288128-20288358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr13:25313358-25313215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
536-750
               

               
Cow position:
               
chr13:25926579-25926792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
536-759
               

               
Cow position:
               
chr13:13320588-13320808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
536-762
               

               
Cow position:
               
chr13:19393087-19393305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
536-762
               

               
Cow position:
               
chr13:24585839-24586056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
536-762
               

               
Cow position:
               
chr13:55494728-55494512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
536-764
               

               
Cow position:
               
chr13:35526403-35526185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
536-765
               

               
Cow position:
               
chr13:20271440-20271209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
536-765
               

               
Cow position:
               
chr13:46329812-46329588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
536-765
               

               
Cow position:
               
chr13:59170435-59170670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
536-766
               

               
Cow position:
               
chr13:6973953-6974179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
536-769
               

               
Cow position:
               
chr13:37803670-37803912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
537-761
               

               
Cow position:
               
chr13:52934220-52934440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
537-773
               

               
Cow position:
               
chr13:35557319-35557082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
538-686
               

               
Cow position:
               
chr13:21070797-21070948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 91
               

               
Conread position:
               
538-759
               

               
Cow position:
               
chr13:19610771-19610556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
538-761
               

               
Cow position:
               
chr13:56958769-56958981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
538-770
               

               
Cow position:
               
chr13:12673495-12673273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
540-767
               

               
Cow position:
               
chr13:61001637-61001858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
543-742
               

               
Cow position:
               
chr13:4404332-4404525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
543-772
               

               
Cow position:
               
chr13:18999329-18999560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
543-781
               

               
Cow position:
               
chr13:18615169-18615417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
544-717
               

               
Cow position:
               
chr13:49475870-49476047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
544-728
               

               
Cow position:
               
chr13:11670605-11670790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
544-731
               

               
Cow position:
               
chr13:8667414-8667600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
544-761
               

               
Cow position:
               
chr13:54353245-54353028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
544-763
               

               
Cow position:
               
chr13:58149101-58149315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
544-788
               

               
Cow position:
               
chr13:18929324-18929567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
546-691
               

               
Cow position:
               
chr13:24155311-24155458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
546-763
               

               
Cow position:
               
chr13:19779054-19778833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
552-753
               

               
Cow position:
               
chr13:20250710-20250915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
552-770
               

               
Cow position:
               
chr13:51128267-51128042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
552-772
               

               
Cow position:
               
chr13:16714457-16714250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
559-729
               

               
Cow position:
               
chr13:17716700-17716533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
562-762
               

               
Cow position:
               
chr13:20666567-20666375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
562-772
               

               
Cow position:
               
chr13:23478847-23479056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
566-762
               

               
Cow position:
               
chr13:52057381-52057571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
568-708
               

               
Cow position:
               
chr13:17135392-17135253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
568-741
               

               
Cow position:
               
chr13:25547760-25547589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
568-764
               

               
Cow position:
               
chr13:43919440-43919246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
568-768
               

               
Cow position:
               
chr13:16160246-16160437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
576-740
               

               
Cow position:
               
chr13:37980925-37980766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
578-681
               

               
Cow position:
               
chr13:55266249-55266351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
579-761
               

               
Cow position:
               
chr13:20288485-20288664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
584-765
               

               
Cow position:
               
chr13:37503744-37503569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
589-739
               

               
Cow position:
               
chr13:9884377-9884526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
590-768
               

               
Cow position:
               
chr13:48554210-48554389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
594-771
               

               
Cow position:
               
chr13:18172186-18172361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
595-746
               

               
Cow position:
               
chr13:26369373-26369521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
595-762
               

               
Cow position:
               
chr13:21283857-21283690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
595-767
               

               
Cow position:
               
chr13:23856060-23856231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
595-768
               

               
Cow position:
               
chr13:14771299-14771472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
595-777
               

               
Cow position:
               
chr13:37381648-37381829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
595-788
               

               
Cow position:
               
chr13:19750562-19750756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
596-765
               

               
Cow position:
               
chr13:20679187-20679357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
596-770
               

               
Cow position:
               
chr13:11643789-11643961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
598-746
               

               
Cow position:
               
chr13:17563592-17563737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
598-749
               

               
Cow position:
               
chr13:12547056-12546907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
598-762
               

               
Cow position:
               
chr13:55727754-55727916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
599-768
               

               
Cow position:
               
chr13:24110333-24110497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
600-726
               

               
Cow position:
               
chr13:6975991-6975867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
600-765
               

               
Cow position:
               
chr13:51116171-51116007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
603-750
               

               
Cow position:
               
chr13:19188158-19188303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
607-766
               

               
Cow position:
               
chr13:827105-827261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
614-771
               

               
Cow position:
               
chr13:43829111-43829266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
626-769
               

               
Cow position:
               
chr13:15902903-15903045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               
Show alignments to all cow chromosomes.