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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01E100015.5
        

               
Conread position:
               
477-743
               

               
Cow position:
               
chr29:23819132-23819404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
479-761
               

               
Cow position:
               
chr29:22735198-22735476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
482-766
               

               
Cow position:
               
chr29:35677293-35677582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
483-681
               

               
Cow position:
               
chr29:23142083-23142285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
483-697
               

               
Cow position:
               
chr29:14827982-14828194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
483-770
               

               
Cow position:
               
chr29:14112627-14112340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
487-766
               

               
Cow position:
               
chr29:16290963-16290688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
494-683
               

               
Cow position:
               
chr29:16164201-16164387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
496-681
               

               
Cow position:
               
chr29:36546548-36546733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
497-771
               

               
Cow position:
               
chr29:4070851-4070586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
503-680
               

               
Cow position:
               
chr29:22018958-22019137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
503-741
               

               
Cow position:
               
chr29:8163599-8163837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
503-765
               

               
Cow position:
               
chr29:34744402-34744656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
504-761
               

               
Cow position:
               
chr29:35259208-35258955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
505-771
               

               
Cow position:
               
chr29:6337875-6337623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
507-717
               

               
Cow position:
               
chr29:14747001-14746794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
507-767
               

               
Cow position:
               
chr29:35083998-35084258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
509-697
               

               
Cow position:
               
chr29:2414533-2414718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
509-761
               

               
Cow position:
               
chr29:38581214-38580950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 191
               

               
Conread position:
               
509-767
               

               
Cow position:
               
chr29:5046877-5046617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
509-781
               

               
Cow position:
               
chr29:22534187-22533908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
511-648
               

               
Cow position:
               
chr29:9924354-9924498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr29:45005409-45005658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
512-673
               

               
Cow position:
               
chr29:4741174-4741334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
512-731
               

               
Cow position:
               
chr29:3711594-3711379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
512-754
               

               
Cow position:
               
chr29:16200258-16200501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
512-772
               

               
Cow position:
               
chr29:32656656-32656391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
513-762
               

               
Cow position:
               
chr29:20770558-20770316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
513-765
               

               
Cow position:
               
chr29:31786890-31786635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
513-772
               

               
Cow position:
               
chr29:28674483-28674744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
514-730
               

               
Cow position:
               
chr29:26211269-26211053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
514-760
               

               
Cow position:
               
chr29:29769134-29769380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
514-762
               

               
Cow position:
               
chr29:25814617-25814867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
514-765
               

               
Cow position:
               
chr29:35458553-35458805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
514-769
               

               
Cow position:
               
chr29:16609968-16609710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
514-772
               

               
Cow position:
               
chr29:23577566-23577827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
515-662
               

               
Cow position:
               
chr29:26777225-26777076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr29:27997032-27997201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
515-698
               

               
Cow position:
               
chr29:38732372-38732186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
515-707
               

               
Cow position:
               
chr29:936418-936231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
515-725
               

               
Cow position:
               
chr29:14375663-14375875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
515-730
               

               
Cow position:
               
chr29:4440990-4441204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
515-743
               

               
Cow position:
               
chr29:7290985-7290764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
515-746
               

               
Cow position:
               
chr29:37437917-37438150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
515-758
               

               
Cow position:
               
chr29:5666865-5667109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
515-758
               

               
Cow position:
               
chr29:5830802-5831047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr29:12680375-12680125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr29:20626783-20626535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr29:22720428-22720685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr29:40994664-40994924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 184
               

               
Conread position:
               
515-770
               

               
Cow position:
               
chr29:35292301-35292052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
516-682
               

               
Cow position:
               
chr29:24119284-24119452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
516-735
               

               
Cow position:
               
chr29:32799489-32799715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
516-748
               

               
Cow position:
               
chr29:2056274-2056044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
516-750
               

               
Cow position:
               
chr29:30294657-30294884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
516-760
               

               
Cow position:
               
chr29:30227066-30227304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr29:22166874-22167109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
516-763
               

               
Cow position:
               
chr29:34359609-34359849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
516-770
               

               
Cow position:
               
chr29:5520270-5520524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
517-704
               

               
Cow position:
               
chr29:11894917-11894725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
517-743
               

               
Cow position:
               
chr29:28420970-28420744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
517-748
               

               
Cow position:
               
chr29:18449925-18450153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
517-750
               

               
Cow position:
               
chr29:31929201-31928970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
517-750
               

               
Cow position:
               
chr29:44684310-44684084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr29:4121069-4120823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr29:20925123-20924875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr29:24293083-24292838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr29:39038055-39038300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
517-764
               

               
Cow position:
               
chr29:17110166-17109927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
517-766
               

               
Cow position:
               
chr29:25944082-25944339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
517-769
               

               
Cow position:
               
chr29:1933356-1933609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
517-777
               

               
Cow position:
               
chr29:30441152-30440887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr29:19910175-19909946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 175
               

               
Conread position:
               
519-771
               

               
Cow position:
               
chr29:41531062-41530810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
519-777
               

               
Cow position:
               
chr29:23874673-23874413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
520-708
               

               
Cow position:
               
chr29:22576967-22577156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
523-763
               

               
Cow position:
               
chr29:26017293-26017536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
524-765
               

               
Cow position:
               
chr29:27911798-27911558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
526-681
               

               
Cow position:
               
chr29:11081187-11081347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
526-681
               

               
Cow position:
               
chr29:16735430-16735273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
526-736
               

               
Cow position:
               
chr29:15798156-15797947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
526-740
               

               
Cow position:
               
chr29:34832189-34832394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
526-742
               

               
Cow position:
               
chr29:19363913-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
526-748
               

               
Cow position:
               
chr29:21196447-21196668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
526-759
               

               
Cow position:
               
chr29:23155439-23155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
526-760
               

               
Cow position:
               
chr29:22690432-22690196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
526-761
               

               
Cow position:
               
chr29:40891503-40891725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
526-766
               

               
Cow position:
               
chr29:24624446-24624214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
526-768
               

               
Cow position:
               
chr29:33321553-33321317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
528-668
               

               
Cow position:
               
chr29:4602927-4603079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
528-681
               

               
Cow position:
               
chr29:23734884-23735039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr29:42405151-42404986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-729
               

               
Cow position:
               
chr29:5953654-5953857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
528-730
               

               
Cow position:
               
chr29:19187228-19187027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
528-731
               

               
Cow position:
               
chr29:629739-629538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
528-749
               

               
Cow position:
               
chr29:11227179-11227407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
528-750
               

               
Cow position:
               
chr29:3293145-3292929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
528-762
               

               
Cow position:
               
chr29:17222619-17222382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
528-769
               

               
Cow position:
               
chr29:28066682-28066452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
528-772
               

               
Cow position:
               
chr29:30681502-30681751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
529-681
               

               
Cow position:
               
chr29:24605097-24604945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
529-722
               

               
Cow position:
               
chr29:36697958-36697766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
529-731
               

               
Cow position:
               
chr29:17085480-17085682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
530-727
               

               
Cow position:
               
chr29:684977-685169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
530-765
               

               
Cow position:
               
chr29:24187862-24188099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
530-768
               

               
Cow position:
               
chr29:7125022-7124776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
531-680
               

               
Cow position:
               
chr29:7414693-7414552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
531-753
               

               
Cow position:
               
chr29:41112691-41112901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
531-754
               

               
Cow position:
               
chr29:9378834-9378613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
531-759
               

               
Cow position:
               
chr29:19949504-19949281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr29:36357327-36357098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
531-765
               

               
Cow position:
               
chr29:5893045-5892811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
531-765
               

               
Cow position:
               
chr29:15947368-15947133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr29:22613620-22613393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr29:35501466-35501690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr29:36210349-36210111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
531-768
               

               
Cow position:
               
chr29:22028762-22028992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
532-673
               

               
Cow position:
               
chr29:11685367-11685224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-724
               

               
Cow position:
               
chr29:4648014-4648202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr29:14577055-14576859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
532-732
               

               
Cow position:
               
chr29:19420422-19420614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
532-739
               

               
Cow position:
               
chr29:19125528-19125314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
532-741
               

               
Cow position:
               
chr29:32655896-32656102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
532-743
               

               
Cow position:
               
chr29:36781112-36781316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
532-750
               

               
Cow position:
               
chr29:501398-501180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
532-750
               

               
Cow position:
               
chr29:38754740-38754958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-758
               

               
Cow position:
               
chr29:30827606-30827379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-760
               

               
Cow position:
               
chr29:5408944-5409170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr29:8669549-8669335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr29:31489522-31489288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr29:34297373-34297599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr29:43544412-43544633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
532-765
               

               
Cow position:
               
chr29:37618506-37618270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr29:25737222-25737450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr29:26540342-26540576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr29:8926252-8926497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr29:19762461-19762234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr29:32733500-32733263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-768
               

               
Cow position:
               
chr29:25475129-25474888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
532-770
               

               
Cow position:
               
chr29:17297336-17297097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-770
               

               
Cow position:
               
chr29:20167621-20167385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr29:36531064-36530825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
532-787
               

               
Cow position:
               
chr29:22734908-22735162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
533-702
               

               
Cow position:
               
chr29:33143159-33143325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
533-763
               

               
Cow position:
               
chr29:13028647-13028412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
535-757
               

               
Cow position:
               
chr29:31651597-31651385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
535-765
               

               
Cow position:
               
chr29:25092299-25092080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
535-777
               

               
Cow position:
               
chr29:2744074-2744313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
536-680
               

               
Cow position:
               
chr29:28257331-28257191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
536-730
               

               
Cow position:
               
chr29:41422715-41422906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
536-746
               

               
Cow position:
               
chr29:9310797-9310585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
536-776
               

               
Cow position:
               
chr29:31934570-31934334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
537-767
               

               
Cow position:
               
chr29:26779069-26778847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
538-761
               

               
Cow position:
               
chr29:29057366-29057149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
540-761
               

               
Cow position:
               
chr29:21443151-21443368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
542-731
               

               
Cow position:
               
chr29:18878294-18878481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
543-738
               

               
Cow position:
               
chr29:23913210-23913400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
544-680
               

               
Cow position:
               
chr29:7143485-7143345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
544-767
               

               
Cow position:
               
chr29:29324234-29324457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
545-763
               

               
Cow position:
               
chr29:13639184-13639399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
546-729
               

               
Cow position:
               
chr29:24365713-24365894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
552-751
               

               
Cow position:
               
chr29:23825036-23825230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
552-753
               

               
Cow position:
               
chr29:22723772-22723579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
552-761
               

               
Cow position:
               
chr29:34358802-34359009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr29:38582146-38581936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
553-765
               

               
Cow position:
               
chr29:24046173-24045962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
567-760
               

               
Cow position:
               
chr29:40298857-40299049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
574-765
               

               
Cow position:
               
chr29:13867055-13867244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
574-770
               

               
Cow position:
               
chr29:12025323-12025506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
576-765
               

               
Cow position:
               
chr29:86853-87046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
579-767
               

               
Cow position:
               
chr29:7966393-7966209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
579-784
               

               
Cow position:
               
chr29:25088893-25088691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
590-767
               

               
Cow position:
               
chr29:1557066-1556895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
170, 14
               

               
Conread position:
               
594-767
               

               
Cow position:
               
chr29:7103693-7103525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
596-765
               

               
Cow position:
               
chr29:17409468-17409301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
599-762
               

               
Cow position:
               
chr29:21941731-21941570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
607-765
               

               
Cow position:
               
chr29:31981954-31981797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
615-746
               

               
Cow position:
               
chr29:11053745-11053874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
625-771
               

               
Cow position:
               
chr29:24578968-24578821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 62
               
Show alignments to all cow chromosomes.