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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01E100015.5
        

               
Conread position:
               
430-681
               

               
Cow position:
               
chr3:16710520-16710773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
464-730
               

               
Cow position:
               
chr3:63860367-63860632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
468-681
               

               
Cow position:
               
chr3:76301012-76300798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
471-681
               

               
Cow position:
               
chr3:81616216-81616426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
474-770
               

               
Cow position:
               
chr3:8061355-8061067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
481-761
               

               
Cow position:
               
chr3:9025861-9026136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
482-768
               

               
Cow position:
               
chr3:19586088-19585803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
483-760
               

               
Cow position:
               
chr3:81470874-81471147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
484-761
               

               
Cow position:
               
chr3:59035260-59034985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
486-766
               

               
Cow position:
               
chr3:2638158-2637867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 210
               

               
Conread position:
               
487-692
               

               
Cow position:
               
chr3:8147305-8147509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
487-731
               

               
Cow position:
               
chr3:44534310-44534553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
487-768
               

               
Cow position:
               
chr3:23131952-23132228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
490-748
               

               
Cow position:
               
chr3:8813886-8814152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
491-762
               

               
Cow position:
               
chr3:2392752-2393015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
492-772
               

               
Cow position:
               
chr3:18067350-18067078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
492-777
               

               
Cow position:
               
chr3:71496918-71497207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
493-760
               

               
Cow position:
               
chr3:59649466-59649206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
211, 39
               

               
Conread position:
               
493-762
               

               
Cow position:
               
chr3:29946600-29946333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
495-690
               

               
Cow position:
               
chr3:42484140-42483945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
495-767
               

               
Cow position:
               
chr3:35055763-35056036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
496-767
               

               
Cow position:
               
chr3:3316597-3316874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
497-747
               

               
Cow position:
               
chr3:75222719-75222465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 134
               

               
Conread position:
               
497-762
               

               
Cow position:
               
chr3:51033580-51033313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
499-731
               

               
Cow position:
               
chr3:53604533-53604768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
499-748
               

               
Cow position:
               
chr3:79272368-79272612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
499-764
               

               
Cow position:
               
chr3:55970724-55970450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
499-772
               

               
Cow position:
               
chr3:81234598-81234328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
499-779
               

               
Cow position:
               
chr3:4071562-4071833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
500-671
               

               
Cow position:
               
chr3:635380-635214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
500-761
               

               
Cow position:
               
chr3:6299663-6299403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
502-778
               

               
Cow position:
               
chr3:49679340-49679064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
503-684
               

               
Cow position:
               
chr3:60371190-60371006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
503-748
               

               
Cow position:
               
chr3:46005807-46006057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
503-749
               

               
Cow position:
               
chr3:4120165-4120406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
503-761
               

               
Cow position:
               
chr3:38035383-38035642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 149
               

               
Conread position:
               
503-762
               

               
Cow position:
               
chr3:40212832-40213086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
503-772
               

               
Cow position:
               
chr3:7581513-7581779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
505-760
               

               
Cow position:
               
chr3:3032610-3032358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
506-673
               

               
Cow position:
               
chr3:22078280-22078110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
506-749
               

               
Cow position:
               
chr3:48253082-48252845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
507-651
               

               
Cow position:
               
chr3:66563988-66563839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
507-725
               

               
Cow position:
               
chr3:25735703-25735922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
508-747
               

               
Cow position:
               
chr3:26982248-26982020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
508-759
               

               
Cow position:
               
chr3:22165213-22165465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
509-727
               

               
Cow position:
               
chr3:62312993-62312778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
509-743
               

               
Cow position:
               
chr3:53083784-53084022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
509-759
               

               
Cow position:
               
chr3:23168871-23169113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
509-762
               

               
Cow position:
               
chr3:54551514-54551765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
509-762
               

               
Cow position:
               
chr3:56678156-56678404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
510-724
               

               
Cow position:
               
chr3:6049091-6049304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
510-730
               

               
Cow position:
               
chr3:80023116-80023330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
510-748
               

               
Cow position:
               
chr3:53910305-53910070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
510-761
               

               
Cow position:
               
chr3:16752057-16752312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
510-762
               

               
Cow position:
               
chr3:48468375-48468120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
511-661
               

               
Cow position:
               
chr3:70632343-70632191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
511-681
               

               
Cow position:
               
chr3:42589297-42589125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
511-681
               

               
Cow position:
               
chr3:55105951-55106122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
511-722
               

               
Cow position:
               
chr3:76168432-76168645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
511-727
               

               
Cow position:
               
chr3:36411896-36412106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
511-746
               

               
Cow position:
               
chr3:84137614-84137852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
511-761
               

               
Cow position:
               
chr3:59040769-59040516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr3:47316185-47316431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr3:83988730-83988479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
511-767
               

               
Cow position:
               
chr3:57704525-57704267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
511-768
               

               
Cow position:
               
chr3:69785424-69785686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
511-772
               

               
Cow position:
               
chr3:47417369-47417627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
512-737
               

               
Cow position:
               
chr3:18479102-18479326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
512-762
               

               
Cow position:
               
chr3:35075064-35074828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
512-762
               

               
Cow position:
               
chr3:46792578-46792332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
512-765
               

               
Cow position:
               
chr3:75853140-75853381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
513-692
               

               
Cow position:
               
chr3:3011338-3011163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
513-753
               

               
Cow position:
               
chr3:9641749-9641523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
513-766
               

               
Cow position:
               
chr3:55094037-55094287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
513-771
               

               
Cow position:
               
chr3:31349915-31350167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
514-675
               

               
Cow position:
               
chr3:68648370-68648207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
514-681
               

               
Cow position:
               
chr3:33460406-33460582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
514-692
               

               
Cow position:
               
chr3:3163923-3164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
514-703
               

               
Cow position:
               
chr3:51153237-51153051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
514-739
               

               
Cow position:
               
chr3:53875569-53875795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
514-746
               

               
Cow position:
               
chr3:75777876-75778099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
514-759
               

               
Cow position:
               
chr3:13240882-13241127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
514-759
               

               
Cow position:
               
chr3:27696771-27697028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
514-761
               

               
Cow position:
               
chr3:57776991-57776749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
514-761
               

               
Cow position:
               
chr3:78092317-78092563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
514-761
               

               
Cow position:
               
chr3:78443378-78443619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
514-767
               

               
Cow position:
               
chr3:64197018-64196768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
514-770
               

               
Cow position:
               
chr3:30180276-30180023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
514-771
               

               
Cow position:
               
chr3:21014764-21015021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 22
               

               
Conread position:
               
514-771
               

               
Cow position:
               
chr3:70676423-70676162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
514-771
               

               
Cow position:
               
chr3:79813812-79813546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 181
               

               
Conread position:
               
514-772
               

               
Cow position:
               
chr3:83454964-83455213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
514-781
               

               
Cow position:
               
chr3:56948903-56949160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
246, 92
               

               
Conread position:
               
515-655
               

               
Cow position:
               
chr3:79877222-79877079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
515-660
               

               
Cow position:
               
chr3:42933675-42933528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr3:61171171-61171342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
515-698
               

               
Cow position:
               
chr3:68094344-68094155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
515-698
               

               
Cow position:
               
chr3:68624417-68624228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
515-720
               

               
Cow position:
               
chr3:78258558-78258766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
515-724
               

               
Cow position:
               
chr3:59317893-59317687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
515-730
               

               
Cow position:
               
chr3:18699916-18700132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
515-730
               

               
Cow position:
               
chr3:70402831-70402623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
515-731
               

               
Cow position:
               
chr3:32377005-32376792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
515-731
               

               
Cow position:
               
chr3:51150322-51150106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
515-732
               

               
Cow position:
               
chr3:41366519-41366733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
515-737
               

               
Cow position:
               
chr3:7381639-7381857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
515-743
               

               
Cow position:
               
chr3:14801938-14801710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
515-743
               

               
Cow position:
               
chr3:35624351-35624579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
515-749
               

               
Cow position:
               
chr3:44960138-44959902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
515-757
               

               
Cow position:
               
chr3:27082849-27083097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
515-757
               

               
Cow position:
               
chr3:30940998-30940753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
515-760
               

               
Cow position:
               
chr3:26337824-26338078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr3:15953889-15954137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr3:15228649-15228876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr3:31225613-31225381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
240, 17
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr3:50768870-50768624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr3:53271023-53270777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
515-762
               

               
Cow position:
               
chr3:59605033-59604793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
515-763
               

               
Cow position:
               
chr3:49363300-49363055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
515-763
               

               
Cow position:
               
chr3:53318601-53318348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr3:20841687-20841929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr3:80565155-80564910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr3:19199180-19198929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr3:55712630-55712383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr3:83889441-83889188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
515-770
               

               
Cow position:
               
chr3:45211496-45211240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
515-770
               

               
Cow position:
               
chr3:72474114-72473854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
515-772
               

               
Cow position:
               
chr3:32787654-32787397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
515-772
               

               
Cow position:
               
chr3:51608990-51609248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
515-772
               

               
Cow position:
               
chr3:58134490-58134747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
515-775
               

               
Cow position:
               
chr3:36375346-36375603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
515-775
               

               
Cow position:
               
chr3:59391932-59392186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
515-777
               

               
Cow position:
               
chr3:27976332-27976593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
515-789
               

               
Cow position:
               
chr3:9662978-9663250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
516-681
               

               
Cow position:
               
chr3:58929340-58929508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
516-697
               

               
Cow position:
               
chr3:2016625-2016447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
516-705
               

               
Cow position:
               
chr3:66884841-66885027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
516-708
               

               
Cow position:
               
chr3:79398336-79398143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
516-730
               

               
Cow position:
               
chr3:43388934-43389149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
516-731
               

               
Cow position:
               
chr3:76056098-76056307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
516-735
               

               
Cow position:
               
chr3:13882327-13882547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
516-741
               

               
Cow position:
               
chr3:48851774-48852002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
516-761
               

               
Cow position:
               
chr3:47753426-47753172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
516-761
               

               
Cow position:
               
chr3:66631152-66631404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr3:1830383-1830625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr3:23920235-23920482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr3:34871759-34871514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr3:77188630-77188385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
516-765
               

               
Cow position:
               
chr3:27274720-27274474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
516-767
               

               
Cow position:
               
chr3:12090868-12090617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
38, 157
               

               
Conread position:
               
516-767
               

               
Cow position:
               
chr3:57792964-57792710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
516-768
               

               
Cow position:
               
chr3:31077536-31077791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
517-681
               

               
Cow position:
               
chr3:44218958-44218792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
517-697
               

               
Cow position:
               
chr3:58614656-58614468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
517-725
               

               
Cow position:
               
chr3:79893307-79893514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
517-726
               

               
Cow position:
               
chr3:11027467-11027257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
517-750
               

               
Cow position:
               
chr3:423561-423321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
517-761
               

               
Cow position:
               
chr3:68156918-68156670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr3:68004522-68004755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
517-764
               

               
Cow position:
               
chr3:14601523-14601766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
517-767
               

               
Cow position:
               
chr3:7337597-7337840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
517-767
               

               
Cow position:
               
chr3:65413087-65413337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
517-769
               

               
Cow position:
               
chr3:53428728-53428976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
517-785
               

               
Cow position:
               
chr3:69650708-69650963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
518-681
               

               
Cow position:
               
chr3:21694418-21694251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
518-726
               

               
Cow position:
               
chr3:68289872-68289663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
518-730
               

               
Cow position:
               
chr3:12178250-12178034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 122
               

               
Conread position:
               
518-731
               

               
Cow position:
               
chr3:84807136-84807350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr3:23203041-23203263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
518-762
               

               
Cow position:
               
chr3:18059893-18059649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
518-770
               

               
Cow position:
               
chr3:210511-210258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
518-771
               

               
Cow position:
               
chr3:4268386-4268644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
518-772
               

               
Cow position:
               
chr3:36160011-36160255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
519-678
               

               
Cow position:
               
chr3:58497848-58497687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
519-692
               

               
Cow position:
               
chr3:64909907-64910079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
519-730
               

               
Cow position:
               
chr3:59272020-59271812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
519-730
               

               
Cow position:
               
chr3:59947856-59947644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
519-731
               

               
Cow position:
               
chr3:74127312-74127525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
519-742
               

               
Cow position:
               
chr3:32317639-32317864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
519-750
               

               
Cow position:
               
chr3:55318710-55318941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
519-765
               

               
Cow position:
               
chr3:49482524-49482772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
519-766
               

               
Cow position:
               
chr3:3656704-3656459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
519-767
               

               
Cow position:
               
chr3:15153875-15153634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
520-770
               

               
Cow position:
               
chr3:29891223-29891472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
520-775
               

               
Cow position:
               
chr3:48810450-48810710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 174
               

               
Conread position:
               
523-678
               

               
Cow position:
               
chr3:78115406-78115563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
523-692
               

               
Cow position:
               
chr3:3453768-3453596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
523-704
               

               
Cow position:
               
chr3:63069177-63069361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
523-723
               

               
Cow position:
               
chr3:58010650-58010842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
523-764
               

               
Cow position:
               
chr3:3556732-3556490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
523-772
               

               
Cow position:
               
chr3:52608357-52608120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
524-716
               

               
Cow position:
               
chr3:62186342-62186144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
524-720
               

               
Cow position:
               
chr3:35802754-35802952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
524-734
               

               
Cow position:
               
chr3:81666980-81666774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
524-770
               

               
Cow position:
               
chr3:68707839-68708071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
524-777
               

               
Cow position:
               
chr3:76156171-76155920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
526-675
               

               
Cow position:
               
chr3:29944042-29943889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
526-681
               

               
Cow position:
               
chr3:22899549-22899706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
526-709
               

               
Cow position:
               
chr3:17531556-17531738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
526-716
               

               
Cow position:
               
chr3:55730285-55730476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
526-731
               

               
Cow position:
               
chr3:4271546-4271350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
526-747
               

               
Cow position:
               
chr3:14553054-14552837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
526-759
               

               
Cow position:
               
chr3:31309172-31309404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
526-760
               

               
Cow position:
               
chr3:43233684-43233455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
526-760
               

               
Cow position:
               
chr3:72342429-72342194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr3:11253984-11254223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr3:21866856-21867091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr3:25904858-25905101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr3:65237203-65236971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr3:84174485-84174248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
526-766
               

               
Cow position:
               
chr3:8540683-8540466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
526-767
               

               
Cow position:
               
chr3:32585335-32585091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
526-767
               

               
Cow position:
               
chr3:39969682-39969921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
526-767
               

               
Cow position:
               
chr3:54373675-54373918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 97
               

               
Conread position:
               
526-770
               

               
Cow position:
               
chr3:2675214-2674970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
527-681
               

               
Cow position:
               
chr3:621621-621461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
528-663
               

               
Cow position:
               
chr3:19044589-19044726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
528-674
               

               
Cow position:
               
chr3:18764284-18764135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
528-676
               

               
Cow position:
               
chr3:61680496-61680346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-681
               

               
Cow position:
               
chr3:43016261-43016424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
528-690
               

               
Cow position:
               
chr3:62789770-62789936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr3:4931651-4931824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr3:25702152-25702325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr3:29234499-29234664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr3:49732876-49733036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
528-720
               

               
Cow position:
               
chr3:54350255-54350452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
528-722
               

               
Cow position:
               
chr3:70431608-70431418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
528-730
               

               
Cow position:
               
chr3:58101854-58101658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
528-737
               

               
Cow position:
               
chr3:15160696-15160492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
528-741
               

               
Cow position:
               
chr3:22888834-22889049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
528-750
               

               
Cow position:
               
chr3:33252713-33252930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
528-750
               

               
Cow position:
               
chr3:49996538-49996764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-759
               

               
Cow position:
               
chr3:73335458-73335234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
528-761
               

               
Cow position:
               
chr3:17134510-17134280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
528-761
               

               
Cow position:
               
chr3:39996714-39996943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
528-764
               

               
Cow position:
               
chr3:9121021-9120788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
528-765
               

               
Cow position:
               
chr3:8181770-8182006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
528-766
               

               
Cow position:
               
chr3:37041595-37041363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr3:10958065-10958298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr3:15950737-15950973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
528-770
               

               
Cow position:
               
chr3:57577875-57577638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
528-772
               

               
Cow position:
               
chr3:30462997-30463233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
529-664
               

               
Cow position:
               
chr3:72626564-72626702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
529-721
               

               
Cow position:
               
chr3:64800369-64800562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
529-730
               

               
Cow position:
               
chr3:35883754-35883955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
529-762
               

               
Cow position:
               
chr3:17456089-17456321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
529-768
               

               
Cow position:
               
chr3:11281947-11281707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
529-770
               

               
Cow position:
               
chr3:73395293-73395056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
530-681
               

               
Cow position:
               
chr3:80958332-80958485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
530-729
               

               
Cow position:
               
chr3:31793704-31793904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
530-730
               

               
Cow position:
               
chr3:9718072-9718272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
530-730
               

               
Cow position:
               
chr3:61023844-61024044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
530-750
               

               
Cow position:
               
chr3:68303495-68303275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
530-765
               

               
Cow position:
               
chr3:7330961-7331179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
530-770
               

               
Cow position:
               
chr3:23408187-23408418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
531-681
               

               
Cow position:
               
chr3:2637121-2636976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
531-682
               

               
Cow position:
               
chr3:36418311-36418458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
531-705
               

               
Cow position:
               
chr3:74050530-74050698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
531-720
               

               
Cow position:
               
chr3:41510754-41510565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
531-737
               

               
Cow position:
               
chr3:67407191-67407394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
531-739
               

               
Cow position:
               
chr3:8522978-8523180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
531-741
               

               
Cow position:
               
chr3:28902586-28902791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
531-760
               

               
Cow position:
               
chr3:6182057-6182272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
531-761
               

               
Cow position:
               
chr3:83474930-83474692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr3:15159205-15158979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
531-766
               

               
Cow position:
               
chr3:48363245-48363019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
531-766
               

               
Cow position:
               
chr3:55177575-55177803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr3:19682882-19682635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr3:48072710-48072940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr3:59299749-59299517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
531-770
               

               
Cow position:
               
chr3:76270064-76269830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
531-772
               

               
Cow position:
               
chr3:4549193-4548965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
531-772
               

               
Cow position:
               
chr3:70761947-70762183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
532-663
               

               
Cow position:
               
chr3:76138634-76138502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-680
               

               
Cow position:
               
chr3:19641240-19641086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
532-681
               

               
Cow position:
               
chr3:48537541-48537389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
532-681
               

               
Cow position:
               
chr3:58562876-58562720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-681
               

               
Cow position:
               
chr3:77098649-77098796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
532-707
               

               
Cow position:
               
chr3:562614-562792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
532-720
               

               
Cow position:
               
chr3:80910772-80910584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
532-727
               

               
Cow position:
               
chr3:23037333-23037527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
532-730
               

               
Cow position:
               
chr3:2506301-2506499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr3:45183646-45183855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 165
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr3:47198951-47199149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr3:75966607-75966803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
532-732
               

               
Cow position:
               
chr3:19788665-19788853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
532-735
               

               
Cow position:
               
chr3:45314527-45314318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
532-738
               

               
Cow position:
               
chr3:78071617-78071821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
532-740
               

               
Cow position:
               
chr3:11229195-11229396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
532-741
               

               
Cow position:
               
chr3:5703351-5703146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-748
               

               
Cow position:
               
chr3:1011667-1011447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
532-749
               

               
Cow position:
               
chr3:29334236-29334456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
532-750
               

               
Cow position:
               
chr3:59474295-59474081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
532-750
               

               
Cow position:
               
chr3:82366304-82366088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
532-751
               

               
Cow position:
               
chr3:84928282-84928061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
532-752
               

               
Cow position:
               
chr3:5305978-5305755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr3:59702349-59702120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr3:2025378-2025142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr3:22221501-22221275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr3:60264547-60264771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr3:65058874-65058647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
532-764
               

               
Cow position:
               
chr3:48900155-48900385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
532-765
               

               
Cow position:
               
chr3:55819924-55819703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
532-765
               

               
Cow position:
               
chr3:75480173-75479946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr3:2648333-2648567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr3:19711162-19711398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr3:63845115-63844875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr3:65969349-65969108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr3:70609800-70609572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr3:80072318-80072070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
532-768
               

               
Cow position:
               
chr3:15443551-15443784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-769
               

               
Cow position:
               
chr3:75050448-75050677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
532-770
               

               
Cow position:
               
chr3:45882074-45881837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
532-770
               

               
Cow position:
               
chr3:77365117-77365350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr3:23105190-23105427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr3:53790367-53790599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
532-773
               

               
Cow position:
               
chr3:58317768-58318012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 159
               

               
Conread position:
               
532-775
               

               
Cow position:
               
chr3:24468209-24468448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
532-775
               

               
Cow position:
               
chr3:70333794-70334033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-777
               

               
Cow position:
               
chr3:76267798-76268045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 84
               

               
Conread position:
               
533-744
               

               
Cow position:
               
chr3:74234355-74234151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
533-750
               

               
Cow position:
               
chr3:15973744-15973525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
534-741
               

               
Cow position:
               
chr3:11640905-11640701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
534-746
               

               
Cow position:
               
chr3:13380105-13380312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
534-750
               

               
Cow position:
               
chr3:71238322-71238113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
534-762
               

               
Cow position:
               
chr3:64280765-64280984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
534-763
               

               
Cow position:
               
chr3:54506879-54506653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
535-743
               

               
Cow position:
               
chr3:46559544-46559749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
536-748
               

               
Cow position:
               
chr3:54067965-54067758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
536-749
               

               
Cow position:
               
chr3:41863793-41863584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
536-750
               

               
Cow position:
               
chr3:52457080-52456877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
536-762
               

               
Cow position:
               
chr3:31361594-31361367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
536-766
               

               
Cow position:
               
chr3:74533505-74533292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
536-770
               

               
Cow position:
               
chr3:14547170-14546941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
536-770
               

               
Cow position:
               
chr3:53150504-53150262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
536-770
               

               
Cow position:
               
chr3:54100542-54100787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
537-724
               

               
Cow position:
               
chr3:20065977-20066169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
537-767
               

               
Cow position:
               
chr3:10668709-10668937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
537-770
               

               
Cow position:
               
chr3:7662027-7661794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
538-698
               

               
Cow position:
               
chr3:67942364-67942525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
538-730
               

               
Cow position:
               
chr3:77171487-77171294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
538-749
               

               
Cow position:
               
chr3:70756470-70756681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
538-760
               

               
Cow position:
               
chr3:1028477-1028697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
538-764
               

               
Cow position:
               
chr3:75238630-75238402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
539-761
               

               
Cow position:
               
chr3:51233936-51234146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
540-752
               

               
Cow position:
               
chr3:17221966-17222185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
541-727
               

               
Cow position:
               
chr3:62370223-62370037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
541-752
               

               
Cow position:
               
chr3:26603380-26603598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
543-771
               

               
Cow position:
               
chr3:59000599-59000814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
543-772
               

               
Cow position:
               
chr3:79196927-79196694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
544-731
               

               
Cow position:
               
chr3:40145630-40145442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
544-762
               

               
Cow position:
               
chr3:19793427-19793643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
544-767
               

               
Cow position:
               
chr3:66900564-66900791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
544-768
               

               
Cow position:
               
chr3:53046495-53046718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
545-772
               

               
Cow position:
               
chr3:7566259-7566481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
551-765
               

               
Cow position:
               
chr3:72391245-72391026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
8, 141
               

               
Conread position:
               
552-761
               

               
Cow position:
               
chr3:1889953-1890161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
552-762
               

               
Cow position:
               
chr3:74079485-74079689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
552-765
               

               
Cow position:
               
chr3:11987481-11987273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
552-765
               

               
Cow position:
               
chr3:70334539-70334751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
552-766
               

               
Cow position:
               
chr3:15388372-15388157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
166, 15
               

               
Conread position:
               
552-767
               

               
Cow position:
               
chr3:69416625-69416839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
552-770
               

               
Cow position:
               
chr3:84250396-84250603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
557-771
               

               
Cow position:
               
chr3:74134855-74134639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
568-717
               

               
Cow position:
               
chr3:83199649-83199503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
568-753
               

               
Cow position:
               
chr3:32409356-32409168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
568-753
               

               
Cow position:
               
chr3:46266339-46266158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
568-762
               

               
Cow position:
               
chr3:44102103-44101915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
568-767
               

               
Cow position:
               
chr3:33048256-33048452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
569-766
               

               
Cow position:
               
chr3:70565599-70565796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
185, 117
               

               
Conread position:
               
574-766
               

               
Cow position:
               
chr3:12711781-12711972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
575-750
               

               
Cow position:
               
chr3:28898090-28898264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
576-751
               

               
Cow position:
               
chr3:6690131-6689958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
581-762
               

               
Cow position:
               
chr3:73461089-73460914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
587-764
               

               
Cow position:
               
chr3:23471338-23471517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
168, 99
               

               
Conread position:
               
589-742
               

               
Cow position:
               
chr3:10104161-10104008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
590-762
               

               
Cow position:
               
chr3:74900522-74900693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
591-761
               

               
Cow position:
               
chr3:5366884-5366717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
592-762
               

               
Cow position:
               
chr3:82629430-82629263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
592-765
               

               
Cow position:
               
chr3:49790695-49790867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
594-757
               

               
Cow position:
               
chr3:53508724-53508563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
595-733
               

               
Cow position:
               
chr3:28937492-28937629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
595-750
               

               
Cow position:
               
chr3:17934825-17934979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
595-764
               

               
Cow position:
               
chr3:59621536-59621703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
595-765
               

               
Cow position:
               
chr3:52863071-52863240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
595-765
               

               
Cow position:
               
chr3:55984210-55984042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
595-766
               

               
Cow position:
               
chr3:3738595-3738426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
595-770
               

               
Cow position:
               
chr3:30222304-30222129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 88
               

               
Conread position:
               
595-772
               

               
Cow position:
               
chr3:13507580-13507405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
595-774
               

               
Cow position:
               
chr3:70900002-70899827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
596-760
               

               
Cow position:
               
chr3:4481053-4480892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
596-767
               

               
Cow position:
               
chr3:21997675-21997846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
597-749
               

               
Cow position:
               
chr3:64373042-64373196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
598-761
               

               
Cow position:
               
chr3:57760607-57760446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
598-768
               

               
Cow position:
               
chr3:15506558-15506389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
156, 91
               

               
Conread position:
               
600-767
               

               
Cow position:
               
chr3:56059918-56059751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
601-762
               

               
Cow position:
               
chr3:72503790-72503949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
601-770
               

               
Cow position:
               
chr3:48241719-48241558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
603-760
               

               
Cow position:
               
chr3:80053440-80053592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
613-749
               

               
Cow position:
               
chr3:83928341-83928206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
615-762
               

               
Cow position:
               
chr3:41652469-41652323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
616-767
               

               
Cow position:
               
chr3:18459436-18459585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
619-759
               

               
Cow position:
               
chr3:51349912-51349773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
620-762
               

               
Cow position:
               
chr3:49650476-49650335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
620-770
               

               
Cow position:
               
chr3:11292160-11292309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
629-764
               

               
Cow position:
               
chr3:58968824-58968958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.