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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01E100015.5
        

               
Conread position:
               
471-680
               

               
Cow position:
               
chr4:17076025-17076234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
471-750
               

               
Cow position:
               
chr4:34983245-34983520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
472-777
               

               
Cow position:
               
chr4:31505770-31506075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
476-767
               

               
Cow position:
               
chr4:11219002-11218711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
480-771
               

               
Cow position:
               
chr4:1645842-1646140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
483-750
               

               
Cow position:
               
chr4:19538994-19539261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
484-721
               

               
Cow position:
               
chr4:23799512-23799761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
485-682
               

               
Cow position:
               
chr4:19463784-19463587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
485-750
               

               
Cow position:
               
chr4:5576983-5577235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
485-757
               

               
Cow position:
               
chr4:15635212-15635479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
486-760
               

               
Cow position:
               
chr4:19333617-19333352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
487-768
               

               
Cow position:
               
chr4:12048110-12047829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
490-740
               

               
Cow position:
               
chr4:617144-617392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 148
               

               
Conread position:
               
494-787
               

               
Cow position:
               
chr4:22907727-22907445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
249, 48
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr4:19573517-19573270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
496-766
               

               
Cow position:
               
chr4:54927206-54927481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
497-681
               

               
Cow position:
               
chr4:58045406-58045592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 125
               

               
Conread position:
               
498-761
               

               
Cow position:
               
chr4:33181767-33181509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
499-677
               

               
Cow position:
               
chr4:34722595-34722415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
499-724
               

               
Cow position:
               
chr4:45484026-45483800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
499-751
               

               
Cow position:
               
chr4:13919200-13918956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
500-765
               

               
Cow position:
               
chr4:12901331-12901597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
502-731
               

               
Cow position:
               
chr4:63078446-63078217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
502-767
               

               
Cow position:
               
chr4:62472296-62472037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
503-708
               

               
Cow position:
               
chr4:11154496-11154286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr4:42080483-42080710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
503-750
               

               
Cow position:
               
chr4:1985873-1985623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
503-751
               

               
Cow position:
               
chr4:63719-63966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
503-764
               

               
Cow position:
               
chr4:2099854-2099588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
504-720
               

               
Cow position:
               
chr4:16118510-16118724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
504-735
               

               
Cow position:
               
chr4:5790862-5790637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
504-761
               

               
Cow position:
               
chr4:4084891-4085154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
506-726
               

               
Cow position:
               
chr4:12867320-12867105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
506-750
               

               
Cow position:
               
chr4:47038983-47038743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
506-765
               

               
Cow position:
               
chr4:38946436-38946172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
507-759
               

               
Cow position:
               
chr4:9925424-9925662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
508-684
               

               
Cow position:
               
chr4:30935141-30935323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
508-785
               

               
Cow position:
               
chr4:11900937-11901215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
509-753
               

               
Cow position:
               
chr4:57566478-57566709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
510-746
               

               
Cow position:
               
chr4:40995947-40995711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
510-747
               

               
Cow position:
               
chr4:36717700-36717462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr4:23526909-23526657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr4:47731072-47730822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr4:59785529-59785286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
511-767
               

               
Cow position:
               
chr4:38156883-38157130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
512-681
               

               
Cow position:
               
chr4:53050204-53050036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
512-681
               

               
Cow position:
               
chr4:56395728-56395556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 116
               

               
Conread position:
               
512-708
               

               
Cow position:
               
chr4:41099147-41098953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
512-731
               

               
Cow position:
               
chr4:16091106-16091321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
512-741
               

               
Cow position:
               
chr4:23757984-23757747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
512-750
               

               
Cow position:
               
chr4:60363560-60363326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
512-761
               

               
Cow position:
               
chr4:25197279-25197531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
512-762
               

               
Cow position:
               
chr4:38209763-38210011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
512-772
               

               
Cow position:
               
chr4:60131442-60131180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
513-678
               

               
Cow position:
               
chr4:19543156-19542983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
513-681
               

               
Cow position:
               
chr4:27691463-27691629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
513-718
               

               
Cow position:
               
chr4:27657182-27656985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
513-728
               

               
Cow position:
               
chr4:38949318-38949539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
513-748
               

               
Cow position:
               
chr4:43909971-43909742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
513-755
               

               
Cow position:
               
chr4:24371645-24371890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
513-762
               

               
Cow position:
               
chr4:56591252-56591006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
513-769
               

               
Cow position:
               
chr4:35982210-35981953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
514-682
               

               
Cow position:
               
chr4:42608948-42608781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
514-696
               

               
Cow position:
               
chr4:45801728-45801545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
514-765
               

               
Cow position:
               
chr4:18974638-18974384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
514-766
               

               
Cow position:
               
chr4:62317656-62317402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
514-767
               

               
Cow position:
               
chr4:36290829-36290582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
515-657
               

               
Cow position:
               
chr4:47035513-47035657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
515-680
               

               
Cow position:
               
chr4:63198156-63198327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
515-682
               

               
Cow position:
               
chr4:59557647-59557483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
515-682
               

               
Cow position:
               
chr4:66354742-66354915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
515-698
               

               
Cow position:
               
chr4:45773674-45773490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
515-711
               

               
Cow position:
               
chr4:30944162-30943969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
515-717
               

               
Cow position:
               
chr4:5250400-5250196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
515-718
               

               
Cow position:
               
chr4:3519626-3519429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
515-718
               

               
Cow position:
               
chr4:50494987-50494779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
515-720
               

               
Cow position:
               
chr4:25802903-25802696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
515-722
               

               
Cow position:
               
chr4:42044768-42044971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
515-726
               

               
Cow position:
               
chr4:36876647-36876858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
515-727
               

               
Cow position:
               
chr4:34722673-34722888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
515-730
               

               
Cow position:
               
chr4:348224-348429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
515-731
               

               
Cow position:
               
chr4:47230788-47231003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
515-731
               

               
Cow position:
               
chr4:47283803-47284018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
515-731
               

               
Cow position:
               
chr4:61998989-61999207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
515-743
               

               
Cow position:
               
chr4:47262746-47262517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
515-743
               

               
Cow position:
               
chr4:52823195-52823430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
515-747
               

               
Cow position:
               
chr4:19238426-19238197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
515-750
               

               
Cow position:
               
chr4:45212978-45213214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
515-750
               

               
Cow position:
               
chr4:45706248-45706019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
515-750
               

               
Cow position:
               
chr4:46560387-46560156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
515-759
               

               
Cow position:
               
chr4:508705-508942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
515-760
               

               
Cow position:
               
chr4:39007705-39007476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr4:17832685-17832936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr4:22546632-22546876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr4:3407868-3407616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 154
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr4:19431482-19431735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
515-765
               

               
Cow position:
               
chr4:45685661-45685418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr4:68456707-68456960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
515-767
               

               
Cow position:
               
chr4:4318946-4319193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
515-770
               

               
Cow position:
               
chr4:2681537-2681290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
515-771
               

               
Cow position:
               
chr4:20142705-20142952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
515-771
               

               
Cow position:
               
chr4:63951956-63952210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
516-681
               

               
Cow position:
               
chr4:56853060-56852891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
516-708
               

               
Cow position:
               
chr4:8352354-8352547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
516-721
               

               
Cow position:
               
chr4:39010260-39010054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
516-728
               

               
Cow position:
               
chr4:30769239-30769033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
516-737
               

               
Cow position:
               
chr4:10999500-10999726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
516-749
               

               
Cow position:
               
chr4:27521767-27521530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
516-755
               

               
Cow position:
               
chr4:56746201-56745962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
516-770
               

               
Cow position:
               
chr4:23450883-23451139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
516-770
               

               
Cow position:
               
chr4:34209144-34208893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
516-772
               

               
Cow position:
               
chr4:19199075-19199333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
516-772
               

               
Cow position:
               
chr4:47305288-47305031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
516-777
               

               
Cow position:
               
chr4:32562038-32561781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
517-688
               

               
Cow position:
               
chr4:46176089-46176262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
517-692
               

               
Cow position:
               
chr4:16636870-16637041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
517-692
               

               
Cow position:
               
chr4:61451424-61451247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
517-724
               

               
Cow position:
               
chr4:56236348-56236550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
517-731
               

               
Cow position:
               
chr4:12245419-12245207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
517-731
               

               
Cow position:
               
chr4:42347692-42347479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
517-758
               

               
Cow position:
               
chr4:8182429-8182672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr4:7698471-7698230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
517-762
               

               
Cow position:
               
chr4:28841626-28841380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
517-765
               

               
Cow position:
               
chr4:22138012-22138261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
517-765
               

               
Cow position:
               
chr4:45874257-45874506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
517-766
               

               
Cow position:
               
chr4:10968190-10968427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
517-767
               

               
Cow position:
               
chr4:17851056-17851295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
517-767
               

               
Cow position:
               
chr4:60141320-60141558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
517-770
               

               
Cow position:
               
chr4:47748622-47748371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
517-771
               

               
Cow position:
               
chr4:44772833-44773088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
517-771
               

               
Cow position:
               
chr4:59277267-59277525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
518-750
               

               
Cow position:
               
chr4:6072846-6073073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
518-759
               

               
Cow position:
               
chr4:11897097-11897328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
518-766
               

               
Cow position:
               
chr4:37675834-37675578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
518-769
               

               
Cow position:
               
chr4:48902407-48902668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 180
               

               
Conread position:
               
519-673
               

               
Cow position:
               
chr4:56756062-56755906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
519-725
               

               
Cow position:
               
chr4:23808162-23807950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
519-725
               

               
Cow position:
               
chr4:61887844-61887637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
519-767
               

               
Cow position:
               
chr4:32693992-32693748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
520-681
               

               
Cow position:
               
chr4:23943440-23943601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
520-762
               

               
Cow position:
               
chr4:34383140-34383377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
181, 28
               

               
Conread position:
               
521-742
               

               
Cow position:
               
chr4:61608766-61608981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
521-748
               

               
Cow position:
               
chr4:13326748-13326973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
523-681
               

               
Cow position:
               
chr4:12908569-12908417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
523-730
               

               
Cow position:
               
chr4:50837905-50837699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
523-735
               

               
Cow position:
               
chr4:4647600-4647390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
523-766
               

               
Cow position:
               
chr4:23509790-23509555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
523-767
               

               
Cow position:
               
chr4:37343320-37343087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
524-763
               

               
Cow position:
               
chr4:13284583-13284347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
524-764
               

               
Cow position:
               
chr4:12474050-12473811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
525-743
               

               
Cow position:
               
chr4:29247002-29247218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
526-662
               

               
Cow position:
               
chr4:43436464-43436325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
526-680
               

               
Cow position:
               
chr4:11186165-11186008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
526-751
               

               
Cow position:
               
chr4:6093865-6094091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
526-753
               

               
Cow position:
               
chr4:46383168-46383397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
526-761
               

               
Cow position:
               
chr4:65919815-65919576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr4:51851410-51851170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
526-764
               

               
Cow position:
               
chr4:50687668-50687899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
526-765
               

               
Cow position:
               
chr4:38358630-38358859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
526-767
               

               
Cow position:
               
chr4:68590966-68590735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
526-768
               

               
Cow position:
               
chr4:48104368-48104611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
526-770
               

               
Cow position:
               
chr4:38822120-38822360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
526-772
               

               
Cow position:
               
chr4:16221674-16221923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
527-716
               

               
Cow position:
               
chr4:36709220-36709030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
528-639
               

               
Cow position:
               
chr4:33273150-33273263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
528-662
               

               
Cow position:
               
chr4:46234967-46235102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
528-677
               

               
Cow position:
               
chr4:46258690-46258539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-679
               

               
Cow position:
               
chr4:7816496-7816338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
528-682
               

               
Cow position:
               
chr4:63293653-63293502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
528-692
               

               
Cow position:
               
chr4:20282434-20282275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
528-698
               

               
Cow position:
               
chr4:23925179-23925357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 164
               

               
Conread position:
               
528-728
               

               
Cow position:
               
chr4:23984923-23985126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 163
               

               
Conread position:
               
528-730
               

               
Cow position:
               
chr4:7043622-7043823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
528-730
               

               
Cow position:
               
chr4:51083145-51083341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
528-731
               

               
Cow position:
               
chr4:45964086-45963878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
528-732
               

               
Cow position:
               
chr4:42373960-42374163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
528-741
               

               
Cow position:
               
chr4:51986379-51986594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
528-748
               

               
Cow position:
               
chr4:34310270-34310475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
528-750
               

               
Cow position:
               
chr4:12127443-12127663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
6, 75
               

               
Conread position:
               
528-751
               

               
Cow position:
               
chr4:21112377-21112592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
528-761
               

               
Cow position:
               
chr4:17186153-17186384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
528-761
               

               
Cow position:
               
chr4:48381586-48381346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
528-762
               

               
Cow position:
               
chr4:26959771-26960005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
528-762
               

               
Cow position:
               
chr4:45250169-45249935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
528-762
               

               
Cow position:
               
chr4:68569448-68569691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 100
               

               
Conread position:
               
528-765
               

               
Cow position:
               
chr4:22713301-22713533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
528-766
               

               
Cow position:
               
chr4:9444487-9444727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
528-766
               

               
Cow position:
               
chr4:45800076-45799833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
528-767
               

               
Cow position:
               
chr4:19578578-19578349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
528-770
               

               
Cow position:
               
chr4:23444843-23445091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
528-786
               

               
Cow position:
               
chr4:16513333-16513587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
529-753
               

               
Cow position:
               
chr4:31594565-31594789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
529-765
               

               
Cow position:
               
chr4:12004410-12004178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
529-771
               

               
Cow position:
               
chr4:45837435-45837671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
529-786
               

               
Cow position:
               
chr4:31178016-31177772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
530-699
               

               
Cow position:
               
chr4:23271477-23271309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
530-760
               

               
Cow position:
               
chr4:42423615-42423839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
530-762
               

               
Cow position:
               
chr4:43894616-43894849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
530-767
               

               
Cow position:
               
chr4:37691118-37691353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
531-728
               

               
Cow position:
               
chr4:37991781-37991590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
531-758
               

               
Cow position:
               
chr4:46404719-46404936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
531-760
               

               
Cow position:
               
chr4:28771878-28772101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
531-761
               

               
Cow position:
               
chr4:34510021-34509803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr4:10915640-10915877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr4:16814583-16814345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
531-762
               

               
Cow position:
               
chr4:21531448-21531679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
531-763
               

               
Cow position:
               
chr4:51728266-51728040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr4:34631099-34630857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr4:59001946-59002181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
531-769
               

               
Cow position:
               
chr4:69290549-69290783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
531-770
               

               
Cow position:
               
chr4:27530304-27530073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
224, 36
               

               
Conread position:
               
532-661
               

               
Cow position:
               
chr4:26183325-26183195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
532-673
               

               
Cow position:
               
chr4:54315031-54315174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-679
               

               
Cow position:
               
chr4:45723440-45723291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-680
               

               
Cow position:
               
chr4:10785949-10786095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
532-681
               

               
Cow position:
               
chr4:28660355-28660507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
532-686
               

               
Cow position:
               
chr4:34919083-34919236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
532-686
               

               
Cow position:
               
chr4:42277801-42277950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
532-692
               

               
Cow position:
               
chr4:47417604-47417446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
532-692
               

               
Cow position:
               
chr4:48239157-48239318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
532-699
               

               
Cow position:
               
chr4:19584905-19584730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
532-711
               

               
Cow position:
               
chr4:19200297-19200127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
532-724
               

               
Cow position:
               
chr4:46656325-46656131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
532-728
               

               
Cow position:
               
chr4:62794165-62794365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
532-730
               

               
Cow position:
               
chr4:54937285-54937075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
532-731
               

               
Cow position:
               
chr4:23059661-23059861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
532-739
               

               
Cow position:
               
chr4:35974558-35974345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
532-741
               

               
Cow position:
               
chr4:23600355-23600152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
532-742
               

               
Cow position:
               
chr4:61969539-61969745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
532-743
               

               
Cow position:
               
chr4:51769296-51769089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
532-743
               

               
Cow position:
               
chr4:67393286-67393074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
532-748
               

               
Cow position:
               
chr4:13344727-13344516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
532-748
               

               
Cow position:
               
chr4:18098870-18099084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
532-750
               

               
Cow position:
               
chr4:27632632-27632423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
532-750
               

               
Cow position:
               
chr4:54789833-54789615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
532-752
               

               
Cow position:
               
chr4:46435525-46435298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
532-755
               

               
Cow position:
               
chr4:48152180-48152400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
532-755
               

               
Cow position:
               
chr4:65173293-65173073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
532-760
               

               
Cow position:
               
chr4:3388733-3388510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
532-760
               

               
Cow position:
               
chr4:13131672-13131440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
532-760
               

               
Cow position:
               
chr4:20147376-20147149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr4:26659491-26659265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr4:38944067-38944291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr4:54390823-54391052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
532-761
               

               
Cow position:
               
chr4:58018533-58018309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:12591029-12591250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:22236294-22236514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:32458665-32458897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:37732288-37732519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:45582931-45583155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:52576550-52576324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
532-762
               

               
Cow position:
               
chr4:52780036-52779814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
532-763
               

               
Cow position:
               
chr4:46136940-46136713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
532-764
               

               
Cow position:
               
chr4:28836722-28836497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
223, 31
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr4:1015262-1015028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr4:2774914-2774670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr4:26644938-26644700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr4:46566280-46566513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
532-768
               

               
Cow position:
               
chr4:66380145-66380381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
532-770
               

               
Cow position:
               
chr4:56239673-56239904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
532-771
               

               
Cow position:
               
chr4:66547572-66547813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr4:15905297-15905053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr4:16762528-16762774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr4:46883476-46883720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr4:60719283-60719055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
532-776
               

               
Cow position:
               
chr4:45636363-45636116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
532-782
               

               
Cow position:
               
chr4:10558727-10558476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
532-789
               

               
Cow position:
               
chr4:44613196-44612942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
533-752
               

               
Cow position:
               
chr4:12442099-12441869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
533-752
               

               
Cow position:
               
chr4:13241829-13241599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
533-767
               

               
Cow position:
               
chr4:3853669-3853431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
534-682
               

               
Cow position:
               
chr4:10958469-10958618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
534-728
               

               
Cow position:
               
chr4:35291212-35291018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
534-746
               

               
Cow position:
               
chr4:27699229-27699012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
534-753
               

               
Cow position:
               
chr4:24092942-24093168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
534-761
               

               
Cow position:
               
chr4:37915149-37915370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
534-762
               

               
Cow position:
               
chr4:25354717-25354486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
534-770
               

               
Cow position:
               
chr4:19709132-19708888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
535-759
               

               
Cow position:
               
chr4:41900154-41899938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
535-762
               

               
Cow position:
               
chr4:22101073-22101301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
536-678
               

               
Cow position:
               
chr4:44024352-44024496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr4:28854089-28854231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
536-684
               

               
Cow position:
               
chr4:50131709-50131557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
536-698
               

               
Cow position:
               
chr4:48693782-48693626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
536-740
               

               
Cow position:
               
chr4:27276358-27276558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
536-741
               

               
Cow position:
               
chr4:19496687-19496479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
536-743
               

               
Cow position:
               
chr4:10732403-10732206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
536-750
               

               
Cow position:
               
chr4:19500901-19501116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
536-762
               

               
Cow position:
               
chr4:52831828-52832054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
536-762
               

               
Cow position:
               
chr4:64040316-64040080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
536-765
               

               
Cow position:
               
chr4:13221993-13222223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
536-765
               

               
Cow position:
               
chr4:19102689-19102921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
536-765
               

               
Cow position:
               
chr4:46494488-46494256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
536-766
               

               
Cow position:
               
chr4:11969641-11969415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
536-767
               

               
Cow position:
               
chr4:21874365-21874131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
536-767
               

               
Cow position:
               
chr4:38935545-38935316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
536-772
               

               
Cow position:
               
chr4:3421811-3421575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
536-776
               

               
Cow position:
               
chr4:65265102-65265356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
537-670
               

               
Cow position:
               
chr4:8388893-8389027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
537-750
               

               
Cow position:
               
chr4:13590273-13590059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
537-762
               

               
Cow position:
               
chr4:3341141-3340916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
537-762
               

               
Cow position:
               
chr4:19700293-19700062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
537-765
               

               
Cow position:
               
chr4:20026919-20027143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
537-771
               

               
Cow position:
               
chr4:40414441-40414676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
538-731
               

               
Cow position:
               
chr4:48138130-48137943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
538-762
               

               
Cow position:
               
chr4:38999601-38999384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
540-748
               

               
Cow position:
               
chr4:43740714-43740512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
540-764
               

               
Cow position:
               
chr4:386211-386430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
541-722
               

               
Cow position:
               
chr4:19123052-19122876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
541-731
               

               
Cow position:
               
chr4:27511730-27511539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
542-715
               

               
Cow position:
               
chr4:53380869-53380698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
542-751
               

               
Cow position:
               
chr4:34653694-34653894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
544-721
               

               
Cow position:
               
chr4:30845564-30845376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 154
               

               
Conread position:
               
544-750
               

               
Cow position:
               
chr4:45775151-45775362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
544-759
               

               
Cow position:
               
chr4:26323923-26323706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
544-761
               

               
Cow position:
               
chr4:4827312-4827090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
544-762
               

               
Cow position:
               
chr4:54478735-54478954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
544-768
               

               
Cow position:
               
chr4:46550568-46550338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
546-767
               

               
Cow position:
               
chr4:54171802-54171583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
546-768
               

               
Cow position:
               
chr4:17052410-17052636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 145
               

               
Conread position:
               
552-713
               

               
Cow position:
               
chr4:39092053-39091899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
552-739
               

               
Cow position:
               
chr4:13995557-13995374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
552-760
               

               
Cow position:
               
chr4:7847107-7847314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
552-762
               

               
Cow position:
               
chr4:54871854-54872063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
552-763
               

               
Cow position:
               
chr4:19097460-19097251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
553-742
               

               
Cow position:
               
chr4:53819516-53819702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
568-708
               

               
Cow position:
               
chr4:22050960-22051098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
571-727
               

               
Cow position:
               
chr4:21520731-21520577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
574-764
               

               
Cow position:
               
chr4:61188720-61188907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
576-770
               

               
Cow position:
               
chr4:46455921-46456109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
589-782
               

               
Cow position:
               
chr4:42231889-42232080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
589-789
               

               
Cow position:
               
chr4:2602367-2602170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
590-762
               

               
Cow position:
               
chr4:53100938-53100765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
591-761
               

               
Cow position:
               
chr4:51193101-51192932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
591-777
               

               
Cow position:
               
chr4:45862544-45862366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
592-751
               

               
Cow position:
               
chr4:44786174-44786017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
595-760
               

               
Cow position:
               
chr4:19098601-19098435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
595-762
               

               
Cow position:
               
chr4:65131325-65131489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
595-766
               

               
Cow position:
               
chr4:58880833-58881002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
595-768
               

               
Cow position:
               
chr4:44782503-44782334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
595-771
               

               
Cow position:
               
chr4:2002-1826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
595-771
               

               
Cow position:
               
chr4:59378038-59377865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
596-750
               

               
Cow position:
               
chr4:61926563-61926714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
596-761
               

               
Cow position:
               
chr4:65650005-65650165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
596-766
               

               
Cow position:
               
chr4:44838767-44838932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
596-771
               

               
Cow position:
               
chr4:51920672-51920498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 28
               

               
Conread position:
               
597-765
               

               
Cow position:
               
chr4:46591795-46591626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
154, 90
               

               
Conread position:
               
598-765
               

               
Cow position:
               
chr4:8705119-8704953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
598-784
               

               
Cow position:
               
chr4:12135801-12135982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
600-792
               

               
Cow position:
               
chr4:19256817-19256630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
601-761
               

               
Cow position:
               
chr4:45805156-45805316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
601-763
               

               
Cow position:
               
chr4:15462128-15462290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
601-771
               

               
Cow position:
               
chr4:54920967-54921132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
606-762
               

               
Cow position:
               
chr4:54541519-54541674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
606-773
               

               
Cow position:
               
chr4:33433140-33433305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
609-762
               

               
Cow position:
               
chr4:65175030-65175181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
617-766
               

               
Cow position:
               
chr4:24001859-24002005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
620-761
               

               
Cow position:
               
chr4:5460757-5460896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
640-777
               

               
Cow position:
               
chr4:65432235-65432098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 47
               
Show alignments to all cow chromosomes.