Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F010042.5 |
| Conread position: | 40-377 |
| Cow position: | chr24:1261380-1261046 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 375-512 |
| Cow position: | chr24:1256402-1256265 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 121 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-813 |
| Cow position: | chr24:1248543-1248239 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 87 |
| Conread position: | 818-995 |
| Cow position: | chr24:11691240-11691417 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 6, 28 |
| Conread position: | 845-997 |
| Cow position: | chr24:1495173-1495023 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 852-996 |
| Cow position: | chr24:36479169-36479313 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 854-995 |
| Cow position: | chr24:14350724-14350581 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 857-995 |
| Cow position: | chr24:12148379-12148518 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 857-996 |
| Cow position: | chr24:16325839-16325974 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 857-1002 |
| Cow position: | chr24:6079151-6079005 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 857-1002 |
| Cow position: | chr24:27960128-27960274 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 862-995 |
| Cow position: | chr24:19688866-19689000 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 866-1003 |
| Cow position: | chr24:16208310-16208442 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 867-993 |
| Cow position: | chr24:19885006-19884878 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 868-995 |
| Cow position: | chr24:6326660-6326786 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 868-995 |
| Cow position: | chr24:6963559-6963431 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 868-995 |
| Cow position: | chr24:14195152-14195280 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 868-995 |
| Cow position: | chr24:15295536-15295408 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 876-1002 |
| Cow position: | chr24:1248224-1248096 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 877-995 |
| Cow position: | chr24:17323394-17323275 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-995 |
| Cow position: | chr24:29085173-29085290 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.