Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F010042.5 |
| Conread position: | 852-995 |
| Cow position: | chr3:72632633-72632489 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 852-996 |
| Cow position: | chr3:38492017-38491873 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 126 |
| Conread position: | 857-982 |
| Cow position: | chr3:2852897-2853022 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 857-995 |
| Cow position: | chr3:24573600-24573738 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 857-995 |
| Cow position: | chr3:45977061-45976922 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 857-995 |
| Cow position: | chr3:56147866-56147727 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 857-995 |
| Cow position: | chr3:81979968-81980107 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 857-996 |
| Cow position: | chr3:27865734-27865594 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 857-996 |
| Cow position: | chr3:49561156-49561294 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 56 |
| Conread position: | 857-1002 |
| Cow position: | chr3:57742085-57741939 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 858-996 |
| Cow position: | chr3:66044358-66044497 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 862-995 |
| Cow position: | chr3:2920801-2920667 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 862-995 |
| Cow position: | chr3:40005335-40005469 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 864-995 |
| Cow position: | chr3:6784960-6784828 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 864-995 |
| Cow position: | chr3:57482171-57482303 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 867-995 |
| Cow position: | chr3:30320814-30320684 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:6713557-6713429 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:16225429-16225304 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:19798604-19798732 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:24264750-24264621 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:26743323-26743451 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:34014890-34014762 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:41208047-41208175 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:48845554-48845426 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:68718158-68718286 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr3:74060025-74059897 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 868-996 |
| Cow position: | chr3:44926370-44926245 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 877-995 |
| Cow position: | chr3:19883015-19882896 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-995 |
| Cow position: | chr3:35611693-35611574 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-995 |
| Cow position: | chr3:46858745-46858864 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-995 |
| Cow position: | chr3:50204086-50203967 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-995 |
| Cow position: | chr3:64025591-64025710 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-995 |
| Cow position: | chr3:68697428-68697547 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 878-995 |
| Cow position: | chr3:24443556-24443674 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-995 |
| Cow position: | chr3:38869119-38869001 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 878-995 |
| Cow position: | chr3:69931295-69931413 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-996 |
| Cow position: | chr3:22084872-22084988 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 886-1003 |
| Cow position: | chr3:71140087-71140205 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.