Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F010042.5 |
| Conread position: | 852-990 |
| Cow position: | chr6:9264726-9264860 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 852-1002 |
| Cow position: | chr6:55539661-55539812 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 857-984 |
| Cow position: | chr6:65660858-65660729 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 857-991 |
| Cow position: | chr6:7047650-7047512 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 857-996 |
| Cow position: | chr6:3263096-3263232 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 857-996 |
| Cow position: | chr6:50636893-50636753 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 866-995 |
| Cow position: | chr6:14133149-14133278 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 867-1001 |
| Cow position: | chr6:47615314-47615447 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 868-984 |
| Cow position: | chr6:26668432-26668549 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:328767-328895 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:2377296-2377168 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:7138743-7138867 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:12971325-12971453 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:14928053-14927925 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:27151848-27151976 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:28186241-28186369 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:31813405-31813533 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:43620323-43620196 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 868-995 |
| Cow position: | chr6:55238287-55238159 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 868-996 |
| Cow position: | chr6:28488973-28489102 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 875-995 |
| Cow position: | chr6:28064576-28064455 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 875-995 |
| Cow position: | chr6:28135520-28135399 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 877-995 |
| Cow position: | chr6:68029760-68029641 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 877-996 |
| Cow position: | chr6:17694655-17694771 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 878-993 |
| Cow position: | chr6:48990-49106 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-995 |
| Cow position: | chr6:704800-704682 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-995 |
| Cow position: | chr6:11722612-11722730 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-995 |
| Cow position: | chr6:33465548-33465430 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-996 |
| Cow position: | chr6:65844490-65844371 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 878-1001 |
| Cow position: | chr6:237283-237407 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 885-996 |
| Cow position: | chr6:39956642-39956531 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 108 |
Show alignments to all cow chromosomes.