Cow genome map
Conread name: | Ss1.1-LyN1-MLN01F010042.5 |
Conread position: | 852-995 |
Cow position: | chrX:21414043-21413900 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 105, 67 |
Conread position: | 852-1002 |
Cow position: | chrX:28667483-28667635 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 856-995 |
Cow position: | chrX:21492611-21492471 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 857-992 |
Cow position: | chrX:22076489-22076624 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 97, 83 |
Conread position: | 857-995 |
Cow position: | chrX:21267629-21267765 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 98, 20 |
Conread position: | 857-995 |
Cow position: | chrX:22126333-22126472 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 857-995 |
Cow position: | chrX:22818515-22818378 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 857-996 |
Cow position: | chrX:23073589-23073448 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 857-996 |
Cow position: | chrX:41687055-41686915 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 46, 62 |
Conread position: | 859-996 |
Cow position: | chrX:387577-387439 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 864-992 |
Cow position: | chrX:20366736-20366865 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 864-995 |
Cow position: | chrX:17890977-17890848 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 864-995 |
Cow position: | chrX:21658030-21657899 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 90, 12 |
Conread position: | 864-995 |
Cow position: | chrX:28753903-28754035 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 864-995 |
Cow position: | chrX:40642650-40642518 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 864-996 |
Cow position: | chrX:13653721-13653596 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 864-996 |
Cow position: | chrX:15569480-15569611 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 123, 12 |
Conread position: | 867-994 |
Cow position: | chrX:5876102-5875975 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 13, 88 |
Conread position: | 867-995 |
Cow position: | chrX:5392747-5392876 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 868-984 |
Cow position: | chrX:26274575-26274458 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:2501080-2500952 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:2814047-2814175 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:6580374-6580246 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:7754336-7754208 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:10529357-10529485 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:13072016-13072144 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 868-995 |
Cow position: | chrX:13092576-13092704 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 868-995 |
Cow position: | chrX:14597286-14597158 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:16045401-16045273 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:19474719-19474846 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 97, 103 |
Conread position: | 868-995 |
Cow position: | chrX:20357570-20357698 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 868-995 |
Cow position: | chrX:20741198-20741326 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:22565255-22565383 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:27304372-27304245 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 868-995 |
Cow position: | chrX:31979404-31979531 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 868-995 |
Cow position: | chrX:35532289-35532161 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 868-995 |
Cow position: | chrX:37814580-37814452 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:37851575-37851447 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 868-995 |
Cow position: | chrX:38963284-38963410 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 877-993 |
Cow position: | chrX:9010754-9010637 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 877-995 |
Cow position: | chrX:5321291-5321410 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 877-995 |
Cow position: | chrX:11458389-11458508 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 877-995 |
Cow position: | chrX:12308342-12308461 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 877-995 |
Cow position: | chrX:16360686-16360805 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 877-995 |
Cow position: | chrX:24731071-24730952 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 877-996 |
Cow position: | chrX:16859192-16859313 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 877-996 |
Cow position: | chrX:29157456-29157337 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 67, 96 |
Conread position: | 877-997 |
Cow position: | chrX:8481872-8481751 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 878-992 |
Cow position: | chrX:12464428-12464313 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 878-995 |
Cow position: | chrX:16702104-16701986 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 878-995 |
Cow position: | chrX:21751237-21751356 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 878-996 |
Cow position: | chrX:26341775-26341893 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 79, 34 |
Conread position: | 879-995 |
Cow position: | chrX:16781704-16781587 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 881-995 |
Cow position: | chrX:1549398-1549283 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 886-995 |
Cow position: | chrX:21388996-21388886 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 887-995 |
Cow position: | chrX:16854937-16855046 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 88 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.