Cow genome map

Conread name: Ss1.1-LyN1-MLN01F010042.5

Conread position: 852-995
Cow position: chrX:21414043-21413900 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 67

Conread position: 852-1002
Cow position: chrX:28667483-28667635 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 856-995
Cow position: chrX:21492611-21492471 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 857-992
Cow position: chrX:22076489-22076624 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 83

Conread position: 857-995
Cow position: chrX:21267629-21267765 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 20

Conread position: 857-995
Cow position: chrX:22126333-22126472 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 857-995
Cow position: chrX:22818515-22818378 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 857-996
Cow position: chrX:23073589-23073448 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 857-996
Cow position: chrX:41687055-41686915 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 62

Conread position: 859-996
Cow position: chrX:387577-387439 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 864-992
Cow position: chrX:20366736-20366865 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 864-995
Cow position: chrX:17890977-17890848 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 864-995
Cow position: chrX:21658030-21657899 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 12

Conread position: 864-995
Cow position: chrX:28753903-28754035 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 864-995
Cow position: chrX:40642650-40642518 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 864-996
Cow position: chrX:13653721-13653596 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 864-996
Cow position: chrX:15569480-15569611 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 12

Conread position: 867-994
Cow position: chrX:5876102-5875975 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 88

Conread position: 867-995
Cow position: chrX:5392747-5392876 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 868-984
Cow position: chrX:26274575-26274458 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:2501080-2500952 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:2814047-2814175 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:6580374-6580246 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:7754336-7754208 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:10529357-10529485 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:13072016-13072144 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 868-995
Cow position: chrX:13092576-13092704 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 868-995
Cow position: chrX:14597286-14597158 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:16045401-16045273 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:19474719-19474846 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 103

Conread position: 868-995
Cow position: chrX:20357570-20357698 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 868-995
Cow position: chrX:20741198-20741326 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:22565255-22565383 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:27304372-27304245 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 868-995
Cow position: chrX:31979404-31979531 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 868-995
Cow position: chrX:35532289-35532161 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 868-995
Cow position: chrX:37814580-37814452 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:37851575-37851447 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 868-995
Cow position: chrX:38963284-38963410 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 877-993
Cow position: chrX:9010754-9010637 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 877-995
Cow position: chrX:5321291-5321410 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 877-995
Cow position: chrX:11458389-11458508 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 877-995
Cow position: chrX:12308342-12308461 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 877-995
Cow position: chrX:16360686-16360805 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 877-995
Cow position: chrX:24731071-24730952 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 877-996
Cow position: chrX:16859192-16859313 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 877-996
Cow position: chrX:29157456-29157337 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 96

Conread position: 877-997
Cow position: chrX:8481872-8481751 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 878-992
Cow position: chrX:12464428-12464313 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 878-995
Cow position: chrX:16702104-16701986 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 878-995
Cow position: chrX:21751237-21751356 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 878-996
Cow position: chrX:26341775-26341893 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 34

Conread position: 879-995
Cow position: chrX:16781704-16781587 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 881-995
Cow position: chrX:1549398-1549283 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 886-995
Cow position: chrX:21388996-21388886 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 887-995
Cow position: chrX:16854937-16855046 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.