Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 482-804 |
| Cow position: | chr10:41985063-41984726 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 490-768 |
| Cow position: | chr10:50044816-50044523 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 492-769 |
| Cow position: | chr10:11032662-11032378 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 492-803 |
| Cow position: | chr10:6012198-6011892 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 492-803 |
| Cow position: | chr10:42453971-42454279 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 492-804 |
| Cow position: | chr10:65072274-65071958 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 492-805 |
| Cow position: | chr10:6038500-6038182 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 213 |
| Conread position: | 495-747 |
| Cow position: | chr10:21424844-21424579 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 495-765 |
| Cow position: | chr10:30450223-30449945 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 495-766 |
| Cow position: | chr10:52589854-52589562 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 495-779 |
| Cow position: | chr10:58746401-58746116 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-794 |
| Cow position: | chr10:19127070-19126765 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-801 |
| Cow position: | chr10:22479885-22479569 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-802 |
| Cow position: | chr10:24785943-24786267 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 495-803 |
| Cow position: | chr10:6490930-6490611 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 31, 132 |
| Conread position: | 495-803 |
| Cow position: | chr10:6568075-6568384 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-803 |
| Cow position: | chr10:9341894-9341576 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-803 |
| Cow position: | chr10:10124183-10124502 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-803 |
| Cow position: | chr10:25478940-25479251 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 496-803 |
| Cow position: | chr10:8413209-8412894 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 497-792 |
| Cow position: | chr10:67144432-67144744 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 497-816 |
| Cow position: | chr10:20110096-20109778 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 503-712 |
| Cow position: | chr10:20478744-20478964 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 503-768 |
| Cow position: | chr10:27576311-27576576 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 503-802 |
| Cow position: | chr10:51221220-51220918 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 503-804 |
| Cow position: | chr10:55011988-55012294 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 503-805 |
| Cow position: | chr10:8648864-8649164 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 506-802 |
| Cow position: | chr10:58399436-58399150 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 35, 158 |
| Conread position: | 507-793 |
| Cow position: | chr10:23949071-23948769 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 507-803 |
| Cow position: | chr10:11497097-11497381 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 515-759 |
| Cow position: | chr10:66753095-66753351 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 516-790 |
| Cow position: | chr10:15874217-15873933 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 526-803 |
| Cow position: | chr10:23404070-23404358 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 536-803 |
| Cow position: | chr10:15391374-15391650 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 201 |
| Conread position: | 597-775 |
| Cow position: | chr10:53762170-53761994 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 104 |
| Conread position: | 597-794 |
| Cow position: | chr10:31250794-31250590 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 622-803 |
| Cow position: | chr10:61113168-61113346 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 642-803 |
| Cow position: | chr10:61426737-61426575 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 651-803 |
| Cow position: | chr10:52889228-52889078 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 45 |
Show alignments to all cow chromosomes.