Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 475-634 |
| Cow position: | chr12:16851206-16851040 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 495-769 |
| Cow position: | chr12:41642256-41642539 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 495-793 |
| Cow position: | chr12:24559181-24559494 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 495-794 |
| Cow position: | chr12:1223521-1223212 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 214 |
| Conread position: | 495-801 |
| Cow position: | chr12:30064771-30065076 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 495-803 |
| Cow position: | chr12:18769250-18768927 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-803 |
| Cow position: | chr12:48425549-48425855 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-804 |
| Cow position: | chr12:25619553-25619232 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 495-810 |
| Cow position: | chr12:25312548-25312223 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 496-794 |
| Cow position: | chr12:30596292-30596605 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 499-793 |
| Cow position: | chr12:21828917-21829206 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 503-803 |
| Cow position: | chr12:5797714-5797424 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 515-711 |
| Cow position: | chr12:38484550-38484344 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 515-767 |
| Cow position: | chr12:14325425-14325167 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 117 |
| Conread position: | 525-691 |
| Cow position: | chr12:48405975-48406140 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 544-803 |
| Cow position: | chr12:29691324-29691051 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 50, 165 |
| Conread position: | 551-769 |
| Cow position: | chr12:24204420-24204205 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 572-805 |
| Cow position: | chr12:44057424-44057659 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 14 |
Show alignments to all cow chromosomes.