Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 471-712 |
| Cow position: | chr15:4373723-4373486 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 476-803 |
| Cow position: | chr15:8937255-8936943 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 481-806 |
| Cow position: | chr15:44252603-44252268 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 491-671 |
| Cow position: | chr15:36671808-36671992 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 492-803 |
| Cow position: | chr15:15215250-15214922 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 492-803 |
| Cow position: | chr15:34255517-34255813 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 492-806 |
| Cow position: | chr15:22886781-22886460 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 495-661 |
| Cow position: | chr15:5527411-5527238 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-666 |
| Cow position: | chr15:10615510-10615680 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 495-739 |
| Cow position: | chr15:12673867-12673620 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 495-747 |
| Cow position: | chr15:4277836-4278094 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 495-766 |
| Cow position: | chr15:11957768-11957486 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 495-767 |
| Cow position: | chr15:9177983-9178257 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 495-779 |
| Cow position: | chr15:12163292-12163584 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-779 |
| Cow position: | chr15:20482614-20482912 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 495-798 |
| Cow position: | chr15:27863100-27863416 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-801 |
| Cow position: | chr15:31599558-31599245 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 54, 211 |
| Conread position: | 495-801 |
| Cow position: | chr15:31907875-31907560 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-802 |
| Cow position: | chr15:21836917-21836598 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-804 |
| Cow position: | chr15:3572473-3572794 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-804 |
| Cow position: | chr15:28236671-28236975 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 495-806 |
| Cow position: | chr15:24864046-24864362 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 495-806 |
| Cow position: | chr15:36658908-36659201 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 496-748 |
| Cow position: | chr15:36838954-36839209 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 496-770 |
| Cow position: | chr15:26421373-26421657 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 496-794 |
| Cow position: | chr15:22854630-22854326 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 496-803 |
| Cow position: | chr15:24411639-24411326 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 496-803 |
| Cow position: | chr15:52982040-52981746 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 497-802 |
| Cow position: | chr15:37964764-37964454 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 504-803 |
| Cow position: | chr15:42195051-42195356 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 507-758 |
| Cow position: | chr15:38323047-38322789 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 514-807 |
| Cow position: | chr15:6749639-6749943 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 521-757 |
| Cow position: | chr15:40498094-40498338 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 528-794 |
| Cow position: | chr15:35967294-35967569 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 532-805 |
| Cow position: | chr15:12036999-12036719 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 173 |
| Conread position: | 554-805 |
| Cow position: | chr15:47821537-47821283 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 42, 35 |
Show alignments to all cow chromosomes.