Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 492-727 |
| Cow position: | chr16:4979668-4979907 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 492-768 |
| Cow position: | chr16:23066526-23066800 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 492-806 |
| Cow position: | chr16:30639206-30639512 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 31 |
| Conread position: | 495-769 |
| Cow position: | chr16:4499297-4499570 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 495-769 |
| Cow position: | chr16:15320604-15320337 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 495-788 |
| Cow position: | chr16:32837686-32837380 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 495-793 |
| Cow position: | chr16:19003214-19002917 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 495-793 |
| Cow position: | chr16:26156273-26155968 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 495-801 |
| Cow position: | chr16:16545933-16546250 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 216 |
| Conread position: | 495-803 |
| Cow position: | chr16:18427047-18427364 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 495-803 |
| Cow position: | chr16:31419306-31419635 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 495-803 |
| Cow position: | chr16:38620824-38621140 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 496-769 |
| Cow position: | chr16:10303885-10303604 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 496-773 |
| Cow position: | chr16:44898866-44898605 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 496-794 |
| Cow position: | chr16:45693008-45693318 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 496-798 |
| Cow position: | chr16:11153328-11153006 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 496-803 |
| Cow position: | chr16:52577330-52577642 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 166, 27 |
| Conread position: | 497-757 |
| Cow position: | chr16:52222464-52222197 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 503-779 |
| Cow position: | chr16:12072510-12072789 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 504-804 |
| Cow position: | chr16:3628686-3628982 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 507-802 |
| Cow position: | chr16:47368635-47368933 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 543-788 |
| Cow position: | chr16:43082317-43082072 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 564-803 |
| Cow position: | chr16:11661972-11662217 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 88, 137 |
Show alignments to all cow chromosomes.