Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 487-803 |
| Cow position: | chr17:27819201-27819515 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 488-768 |
| Cow position: | chr17:19891516-19891809 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 492-753 |
| Cow position: | chr17:25181245-25180980 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 495-650 |
| Cow position: | chr17:23879919-23879760 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 495-739 |
| Cow position: | chr17:13672167-13671929 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 495-767 |
| Cow position: | chr17:7595062-7595334 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 495-767 |
| Cow position: | chr17:35212269-35212540 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 495-794 |
| Cow position: | chr17:39012625-39012930 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 495-801 |
| Cow position: | chr17:6570235-6569926 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 25, 211 |
| Conread position: | 495-803 |
| Cow position: | chr17:18173902-18173607 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 237, 28 |
| Conread position: | 495-803 |
| Cow position: | chr17:18245980-18246289 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 495-803 |
| Cow position: | chr17:37414993-37414679 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-806 |
| Cow position: | chr17:10423986-10424284 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 167 |
| Conread position: | 495-809 |
| Cow position: | chr17:28359748-28360058 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-819 |
| Cow position: | chr17:37778715-37778397 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 496-748 |
| Cow position: | chr17:25707863-25708121 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 496-759 |
| Cow position: | chr17:8926312-8926041 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 497-800 |
| Cow position: | chr17:5787929-5787621 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 504-802 |
| Cow position: | chr17:144267-143957 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 504-806 |
| Cow position: | chr17:33904010-33903699 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 505-803 |
| Cow position: | chr17:10271408-10271707 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 506-769 |
| Cow position: | chr17:27257318-27257032 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 506-793 |
| Cow position: | chr17:24880659-24880954 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 35, 197 |
| Conread position: | 515-798 |
| Cow position: | chr17:37138685-37138972 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 192 |
| Conread position: | 515-806 |
| Cow position: | chr17:32457647-32457344 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 194 |
| Conread position: | 516-691 |
| Cow position: | chr17:5986144-5985959 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 521-803 |
| Cow position: | chr17:8832189-8831919 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 540-794 |
| Cow position: | chr17:9748701-9748954 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 111, 22 |
| Conread position: | 540-803 |
| Cow position: | chr17:2270947-2271220 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 544-762 |
| Cow position: | chr17:1455980-1455763 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 10 |
| Conread position: | 598-803 |
| Cow position: | chr17:35107209-35107422 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 107 |
Show alignments to all cow chromosomes.