Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 460-756 |
| Cow position: | chr21:4276699-4276407 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 474-803 |
| Cow position: | chr21:31576415-31576735 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 182, 51 |
| Conread position: | 482-802 |
| Cow position: | chr21:4098783-4099112 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 489-805 |
| Cow position: | chr21:4723402-4723731 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 491-803 |
| Cow position: | chr21:6316132-6316457 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 492-806 |
| Cow position: | chr21:34565286-34564968 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 493-804 |
| Cow position: | chr21:44754848-44754541 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 494-801 |
| Cow position: | chr21:33947326-33947010 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 495-666 |
| Cow position: | chr21:28997976-28997799 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 495-769 |
| Cow position: | chr21:35997099-35997381 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 495-769 |
| Cow position: | chr21:44093707-44093972 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 495-793 |
| Cow position: | chr21:41514730-41515031 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 495-794 |
| Cow position: | chr21:49649560-49649854 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 495-797 |
| Cow position: | chr21:46242311-46242004 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 495-798 |
| Cow position: | chr21:34739772-34740087 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 495-803 |
| Cow position: | chr21:31661931-31662246 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 495-803 |
| Cow position: | chr21:48291115-48290811 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 495-805 |
| Cow position: | chr21:18941904-18941584 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 164, 107 |
| Conread position: | 496-778 |
| Cow position: | chr21:9353371-9353664 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 496-804 |
| Cow position: | chr21:6058712-6058401 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 503-769 |
| Cow position: | chr21:12087527-12087805 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 504-733 |
| Cow position: | chr21:41583205-41583443 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 93 |
| Conread position: | 516-806 |
| Cow position: | chr21:31004713-31004424 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 519-803 |
| Cow position: | chr21:11676100-11675806 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 22, 184 |
| Conread position: | 523-794 |
| Cow position: | chr21:36371435-36371719 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 541-788 |
| Cow position: | chr21:8184256-8184519 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 629-804 |
| Cow position: | chr21:17807070-17806891 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 72 |
Show alignments to all cow chromosomes.