Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 462-803 |
| Cow position: | chr24:31258532-31258181 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 492-759 |
| Cow position: | chr24:1272030-1271778 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 494-806 |
| Cow position: | chr24:32158435-32158113 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 495-712 |
| Cow position: | chr24:27683599-27683392 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 495-763 |
| Cow position: | chr24:11201809-11201532 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 495-769 |
| Cow position: | chr24:19611847-19612128 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-779 |
| Cow position: | chr24:6061561-6061253 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 495-779 |
| Cow position: | chr24:6507926-6507641 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-788 |
| Cow position: | chr24:39681693-39681987 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 495-794 |
| Cow position: | chr24:24311342-24311652 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-794 |
| Cow position: | chr24:31378598-31378898 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 495-801 |
| Cow position: | chr24:32758922-32758605 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-802 |
| Cow position: | chr24:18787082-18786771 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 495-803 |
| Cow position: | chr24:30860474-30860793 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 495-806 |
| Cow position: | chr24:39350375-39350063 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 497-650 |
| Cow position: | chr24:39259005-39259157 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 497-775 |
| Cow position: | chr24:35827581-35827864 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 157, 208 |
| Conread position: | 505-800 |
| Cow position: | chr24:36801231-36801531 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 507-794 |
| Cow position: | chr24:27633261-27633549 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 507-803 |
| Cow position: | chr24:31776593-31776885 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 525-802 |
| Cow position: | chr24:17981059-17981343 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 543-771 |
| Cow position: | chr24:19754468-19754695 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 112, 25 |
Show alignments to all cow chromosomes.