Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01F030088.5
        

               Conread position:
               482-803
               

               Cow position:
               chr27:20765853-20766180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               492-768
               

               Cow position:
               chr27:26440963-26441236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               495-631
               

               Cow position:
               chr27:19637735-19637593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               495-692
               

               Cow position:
               chr27:23600362-23600155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               495-802
               

               Cow position:
               chr27:8048646-8048957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               497-807
               

               Cow position:
               chr27:14937332-14937661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               507-803
               

               Cow position:
               chr27:25998783-25998479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               511-798
               

               Cow position:
               chr27:19083641-19083939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               514-804
               

               Cow position:
               chr27:783772-783480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               554-807
               

               Cow position:
               chr27:12247708-12247456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 43
               
Show alignments to all cow chromosomes.