Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 482-742 |
| Cow position: | chr29:17543297-17543560 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 72 |
| Conread position: | 492-792 |
| Cow position: | chr29:4367578-4367894 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 49, 213 |
| Conread position: | 492-799 |
| Cow position: | chr29:26298843-26299142 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 164, 39 |
| Conread position: | 492-819 |
| Cow position: | chr29:942485-942820 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 493-804 |
| Cow position: | chr29:7663411-7663090 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 495-767 |
| Cow position: | chr29:19508816-19509086 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 495-769 |
| Cow position: | chr29:13553995-13554281 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-794 |
| Cow position: | chr29:7408024-7407732 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-803 |
| Cow position: | chr29:11787657-11787967 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-823 |
| Cow position: | chr29:37961117-37960778 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 496-801 |
| Cow position: | chr29:39023483-39023158 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 496-805 |
| Cow position: | chr29:18072795-18073121 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 497-803 |
| Cow position: | chr29:29302789-29302481 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 500-803 |
| Cow position: | chr29:41083025-41083322 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 500-804 |
| Cow position: | chr29:18540928-18541229 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 510-787 |
| Cow position: | chr29:14758987-14758701 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 520-803 |
| Cow position: | chr29:1340666-1340963 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 524-794 |
| Cow position: | chr29:7054308-7054583 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 17, 49 |
Show alignments to all cow chromosomes.