Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 453-803 |
| Cow position: | chr7:53744038-53743675 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 481-804 |
| Cow position: | chr7:59245856-59246177 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 482-803 |
| Cow position: | chr7:19399786-19399456 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 482-804 |
| Cow position: | chr7:40192631-40192976 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 7, 132 |
| Conread position: | 492-766 |
| Cow position: | chr7:10099456-10099176 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 212 |
| Conread position: | 492-768 |
| Cow position: | chr7:23177436-23177726 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 492-801 |
| Cow position: | chr7:43234539-43234221 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 495-739 |
| Cow position: | chr7:5250010-5249756 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-756 |
| Cow position: | chr7:7507461-7507724 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 495-756 |
| Cow position: | chr7:11872690-11872430 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 157, 30 |
| Conread position: | 495-757 |
| Cow position: | chr7:8826722-8826989 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 495-779 |
| Cow position: | chr7:37364700-37364978 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-793 |
| Cow position: | chr7:26665650-26665354 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-803 |
| Cow position: | chr7:12755240-12754930 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-803 |
| Cow position: | chr7:19881141-19880820 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-803 |
| Cow position: | chr7:36746227-36746548 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 496-769 |
| Cow position: | chr7:32277454-32277724 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 497-779 |
| Cow position: | chr7:47172799-47172515 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 497-780 |
| Cow position: | chr7:48648718-48648429 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 497-806 |
| Cow position: | chr7:55076794-55076480 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 503-769 |
| Cow position: | chr7:26466660-26466929 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 504-712 |
| Cow position: | chr7:17406436-17406213 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 504-749 |
| Cow position: | chr7:47771484-47771735 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 504-806 |
| Cow position: | chr7:26195882-26195579 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 506-794 |
| Cow position: | chr7:19051407-19051118 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 515-652 |
| Cow position: | chr7:40758310-40758168 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 518-803 |
| Cow position: | chr7:41913767-41913476 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 528-798 |
| Cow position: | chr7:39603271-39603538 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 104 |
| Conread position: | 533-765 |
| Cow position: | chr7:34441245-34441004 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 8, 135 |
| Conread position: | 534-802 |
| Cow position: | chr7:53005300-53005569 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 541-790 |
| Cow position: | chr7:8074150-8073889 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 541-803 |
| Cow position: | chr7:26908079-26907815 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 146 |
| Conread position: | 542-803 |
| Cow position: | chr7:51321690-51321957 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 550-794 |
| Cow position: | chr7:25857507-25857257 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 558-804 |
| Cow position: | chr7:37906384-37906132 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 564-769 |
| Cow position: | chr7:57260267-57260063 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 569-804 |
| Cow position: | chr7:20109007-20108772 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 603-813 |
| Cow position: | chr7:25914471-25914255 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 619-803 |
| Cow position: | chr7:30404536-30404352 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 626-806 |
| Cow position: | chr7:19423605-19423790 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 75 |
Show alignments to all cow chromosomes.