Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01F030088.5 |
| Conread position: | 471-798 |
| Cow position: | chr8:55829486-55829159 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 191, 26 |
| Conread position: | 481-768 |
| Cow position: | chr8:60320381-60320672 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 482-803 |
| Cow position: | chr8:6723945-6723616 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 485-802 |
| Cow position: | chr8:35218228-35218559 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 492-652 |
| Cow position: | chr8:31690675-31690843 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 492-803 |
| Cow position: | chr8:15686518-15686207 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 492-806 |
| Cow position: | chr8:51905173-51904841 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 494-806 |
| Cow position: | chr8:32827804-32827484 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 211 |
| Conread position: | 495-652 |
| Cow position: | chr8:12538739-12538570 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 495-652 |
| Cow position: | chr8:31313771-31313930 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-652 |
| Cow position: | chr8:40549739-40549577 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-692 |
| Cow position: | chr8:30135790-30136000 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 495-705 |
| Cow position: | chr8:42139173-42138951 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 495-716 |
| Cow position: | chr8:18220852-18220630 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 495-734 |
| Cow position: | chr8:44703964-44704212 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 495-740 |
| Cow position: | chr8:45486482-45486725 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 28 |
| Conread position: | 495-762 |
| Cow position: | chr8:29935791-29936067 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-767 |
| Cow position: | chr8:8902091-8901831 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-767 |
| Cow position: | chr8:11590804-11591073 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 495-769 |
| Cow position: | chr8:31815173-31814888 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 495-794 |
| Cow position: | chr8:27053725-27053420 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 495-801 |
| Cow position: | chr8:51959531-51959216 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 495-803 |
| Cow position: | chr8:28221691-28221374 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 495-810 |
| Cow position: | chr8:36505241-36505577 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 221 |
| Conread position: | 497-801 |
| Cow position: | chr8:52863687-52864000 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 206 |
| Conread position: | 500-805 |
| Cow position: | chr8:19512585-19512282 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 503-806 |
| Cow position: | chr8:20682278-20682595 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 505-802 |
| Cow position: | chr8:27681820-27682118 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 202 |
| Conread position: | 510-786 |
| Cow position: | chr8:9811680-9811975 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 207 |
| Conread position: | 510-806 |
| Cow position: | chr8:942699-943008 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 514-803 |
| Cow position: | chr8:20053031-20052725 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 516-804 |
| Cow position: | chr8:5997865-5997576 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 520-759 |
| Cow position: | chr8:45987905-45987653 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 525-803 |
| Cow position: | chr8:11249575-11249289 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 541-791 |
| Cow position: | chr8:34318155-34317890 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 541-804 |
| Cow position: | chr8:32278096-32277833 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 546-794 |
| Cow position: | chr8:25075527-25075778 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 558-806 |
| Cow position: | chr8:37487361-37487100 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 161 |
| Conread position: | 568-798 |
| Cow position: | chr8:41317990-41318225 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 569-792 |
| Cow position: | chr8:18001295-18001084 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 200, 18 |
| Conread position: | 618-803 |
| Cow position: | chr8:15969560-15969372 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 625-803 |
| Cow position: | chr8:24547026-24547210 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 626-803 |
| Cow position: | chr8:46640325-46640148 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 75 |
Show alignments to all cow chromosomes.