Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01F100020.5
        

               Conread position:
               1-200
               

               Cow position:
               chr8:31439719-31439929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               206-305
               

               Cow position:
               chr8:31440079-31440174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               305-399
               

               Cow position:
               chr8:31441009-31441103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 84
               

               Conread position:
               378-456
               

               Cow position:
               chr8:31441461-31441539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               454-576
               

               Cow position:
               chr8:31441625-31441747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               116
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-689
               

               Cow position:
               chr8:31442084-31442207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               688-863
               

               Cow position:
               chr8:31442608-31442782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               825-981
               

               Cow position:
               chr8:31442897-31443053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               133
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               979-1125
               

               Cow position:
               chr8:31443147-31443291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1216-1472
               

               Cow position:
               chr8:31443343-31443630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               
Show alignments to all cow chromosomes.