Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01G080103.5.5
        

               Conread position:
               806-908
               

               Cow position:
               chr16:53273047-53272945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               904-1001
               

               Cow position:
               chr16:53257410-53257313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               978-1134
               

               Cow position:
               chr16:53253151-53252997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               146
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1191-1304
               

               Cow position:
               chr16:53251366-53251253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               112
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1405-1528
               

               Cow position:
               chr16:53244044-53243921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               122
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1517-1655
               

               Cow position:
               chr16:53243852-53243714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               133
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1655-1757
               

               Cow position:
               chr16:53242686-53242584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1755-2554
               

               Cow position:
               chr16:53240842-53240051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               811
               

               Alignm identity:
               649
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 254
               

               Conread position:
               2687-2940
               

               Cow position:
               chr16:53240054-53239799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 93
               
Show alignments to all cow chromosomes.