Cow genome map

Conread name: Ss1.1-LyN1-MLN01G090089.5

Conread position: 114-340
Cow position: chr25:21415900-21415674 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 69

Conread position: 652-758
Cow position: chr25:1972841-1972734 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 652-776
Cow position: chr25:28420865-28420737 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 652-791
Cow position: chr25:10704290-10704434 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 652-791
Cow position: chr25:14962029-14961881 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 652-791
Cow position: chr25:23999343-23999206 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 31

Conread position: 652-791
Cow position: chr25:24637309-24637167 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 104

Conread position: 652-794
Cow position: chr25:40657362-40657505 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 652-795
Cow position: chr25:22197552-22197405 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 652-797
Cow position: chr25:26781248-26781099 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 652-797
Cow position: chr25:29313481-29313336 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 93

Conread position: 652-798
Cow position: chr25:34257272-34257122 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 652-801
Cow position: chr25:23773411-23773263 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 29

Conread position: 652-803
Cow position: chr25:10634172-10634017 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 652-803
Cow position: chr25:11955665-11955820 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 652-803
Cow position: chr25:18474040-18474196 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 652-803
Cow position: chr25:34509345-34509190 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 652-803
Cow position: chr25:35568050-35567894 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 95

Conread position: 652-803
Cow position: chr25:41120843-41120998 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 652-803
Cow position: chr25:41135909-41135754 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 652-811
Cow position: chr25:11929714-11929550 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 652-811
Cow position: chr25:23673027-23672866 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 92

Conread position: 652-811
Cow position: chr25:23740409-23740248 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 94

Conread position: 652-811
Cow position: chr25:33688380-33688220 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 152, 0

Conread position: 652-815
Cow position: chr25:7223597-7223430 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 91

Conread position: 652-815
Cow position: chr25:8875705-8875537 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:10136657-10136826 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 652-815
Cow position: chr25:12939373-12939205 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 652-815
Cow position: chr25:13786809-13786976 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 31

Conread position: 652-815
Cow position: chr25:13959905-13960069 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 34

Conread position: 652-815
Cow position: chr25:17561882-17562049 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 131

Conread position: 652-815
Cow position: chr25:17904474-17904642 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:18886647-18886479 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 652-815
Cow position: chr25:19139738-19139570 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 652-815
Cow position: chr25:19337487-19337323 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 38

Conread position: 652-815
Cow position: chr25:20633601-20633763 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 113

Conread position: 652-815
Cow position: chr25:24007742-24007910 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:24655335-24655167 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:25509707-25509875 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 652-815
Cow position: chr25:26281859-26282027 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 652-815
Cow position: chr25:26706048-26705880 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:27019403-27019235 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:28862705-28862874 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 652-815
Cow position: chr25:29526027-29525865 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 113

Conread position: 652-815
Cow position: chr25:31073762-31073594 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:32577828-32577660 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:34503388-34503220 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 652-815
Cow position: chr25:35553504-35553672 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 652-815
Cow position: chr25:35571654-35571821 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 107

Conread position: 652-815
Cow position: chr25:35755409-35755241 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 652-815
Cow position: chr25:41356963-41356795 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 652-819
Cow position: chr25:9958217-9958044 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 652-819
Cow position: chr25:20772492-20772322 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 76, 159

Conread position: 652-821
Cow position: chr25:36350574-36350748 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 652-822
Cow position: chr25:13941904-13941729 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 652-822
Cow position: chr25:33574892-33574718 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 35

Conread position: 652-833
Cow position: chr25:24303431-24303245 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 652-842
Cow position: chr25:3172565-3172370 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 652-842
Cow position: chr25:18489898-18490095 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 178

Conread position: 652-842
Cow position: chr25:23326192-23325997 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 652-842
Cow position: chr25:23393707-23393902 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 73, 41

Conread position: 652-842
Cow position: chr25:26353950-26353755 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 652-842
Cow position: chr25:26914071-26914261 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 25

Conread position: 652-842
Cow position: chr25:41098362-41098162 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 652-843
Cow position: chr25:25826288-25826478 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 38

Conread position: 652-962
Cow position: chr25:16801313-16801625 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 144, 76

Conread position: 652-972
Cow position: chr25:393104-393456 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 281

Conread position: 652-972
Cow position: chr25:24205277-24204939 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 68, 266

Conread position: 654-803
Cow position: chr25:29802909-29802756 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 654-803
Cow position: chr25:35626396-35626242 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 654-815
Cow position: chr25:13430271-13430108 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 654-815
Cow position: chr25:14756573-14756407 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 654-815
Cow position: chr25:17586184-17586018 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 654-815
Cow position: chr25:18190536-18190372 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 128

Conread position: 654-815
Cow position: chr25:26922678-26922843 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 129

Conread position: 654-843
Cow position: chr25:11896454-11896648 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 654-972
Cow position: chr25:8079747-8080058 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 32

Conread position: 655-815
Cow position: chr25:6475617-6475452 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 655-832
Cow position: chr25:21903287-21903469 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 167

Conread position: 658-842
Cow position: chr25:21949641-21949827 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 67, 19

Conread position: 661-842
Cow position: chr25:17657465-17657649 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 121

Conread position: 663-840
Cow position: chr25:26930941-26931123 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 664-815
Cow position: chr25:11043467-11043623 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 667-801
Cow position: chr25:37468692-37468830 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 102

Conread position: 668-815
Cow position: chr25:10013211-10013059 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 676-805
Cow position: chr25:11665534-11665667 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 14

Conread position: 677-800
Cow position: chr25:37648291-37648418 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 82

Conread position: 677-815
Cow position: chr25:32610551-32610418 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 51

Conread position: 684-806
Cow position: chr25:34164691-34164569 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 687-815
Cow position: chr25:35588947-35589080 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 687-842
Cow position: chr25:6954937-6955097 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 696-812
Cow position: chr25:37593280-37593401 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 791-972
Cow position: chr25:19923532-19923716 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 108

Conread position: 808-969
Cow position: chr25:25039282-25039442 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 87

Conread position: 808-969
Cow position: chr25:37593427-37593594 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 95

Conread position: 808-972
Cow position: chr25:37648452-37648612 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 85

Show alignments to all cow chromosomes.