Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G090089.5 |
| Conread position: | 70-340 |
| Cow position: | chr26:17430238-17429956 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 652-777 |
| Cow position: | chr26:18773174-18773045 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-780 |
| Cow position: | chr26:34014924-34015057 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 652-792 |
| Cow position: | chr26:1614215-1614354 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 652-795 |
| Cow position: | chr26:4753143-4753286 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 652-800 |
| Cow position: | chr26:12258690-12258540 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 652-801 |
| Cow position: | chr26:12668543-12668688 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 652-802 |
| Cow position: | chr26:2201620-2201774 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-802 |
| Cow position: | chr26:2244404-2244262 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 652-802 |
| Cow position: | chr26:11262833-11262987 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-802 |
| Cow position: | chr26:18801068-18800915 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-802 |
| Cow position: | chr26:26285953-26286103 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 652-802 |
| Cow position: | chr26:28706968-28706814 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:2349081-2348926 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:3230558-3230713 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:4440663-4440509 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 652-803 |
| Cow position: | chr26:8083916-8084071 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:9115127-9115284 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:17327252-17327407 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:18804273-18804125 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:23889500-23889657 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 652-803 |
| Cow position: | chr26:31793818-31793971 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-812 |
| Cow position: | chr26:7506623-7506459 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 131 |
| Conread position: | 652-812 |
| Cow position: | chr26:9100888-9100725 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 652-815 |
| Cow position: | chr26:1088274-1088442 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:1343203-1343037 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 652-815 |
| Cow position: | chr26:1346904-1346736 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:1915432-1915600 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:3537212-3537380 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:3862986-3862820 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 652-815 |
| Cow position: | chr26:4729234-4729066 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:5679620-5679788 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:6321197-6321365 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:8739326-8739159 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 652-815 |
| Cow position: | chr26:8884934-8885102 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:9841313-9841140 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:13183401-13183568 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 652-815 |
| Cow position: | chr26:14897091-14897259 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:17182180-17182341 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 652-815 |
| Cow position: | chr26:17429385-17429217 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:18857210-18857378 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:21350594-21350764 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:21535452-21535620 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:26238092-26238260 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:30586255-30586088 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:30594539-30594371 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:34265054-34265222 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:35122151-35121984 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 652-815 |
| Cow position: | chr26:35191457-35191290 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:35423589-35423757 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-815 |
| Cow position: | chr26:35560971-35560803 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-821 |
| Cow position: | chr26:1390074-1390246 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 76, 44 |
| Conread position: | 652-821 |
| Cow position: | chr26:22691480-22691654 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 652-822 |
| Cow position: | chr26:12585448-12585273 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 652-824 |
| Cow position: | chr26:28423649-28423473 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 75, 149 |
| Conread position: | 652-832 |
| Cow position: | chr26:1620741-1620930 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 652-836 |
| Cow position: | chr26:3755116-3755302 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 652-836 |
| Cow position: | chr26:9694706-9694514 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 652-837 |
| Cow position: | chr26:17393805-17393614 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 652-842 |
| Cow position: | chr26:14488164-14487972 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 652-843 |
| Cow position: | chr26:14365145-14364949 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 653-812 |
| Cow position: | chr26:46560-46395 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 653-832 |
| Cow position: | chr26:35335121-35334937 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 74, 178 |
| Conread position: | 653-842 |
| Cow position: | chr26:7381631-7381825 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 653-942 |
| Cow position: | chr26:22660185-22659871 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 29, 265 |
| Conread position: | 654-803 |
| Cow position: | chr26:2221909-2221757 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 117 |
| Conread position: | 654-815 |
| Cow position: | chr26:13806933-13806769 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 654-837 |
| Cow position: | chr26:9558788-9558599 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 655-803 |
| Cow position: | chr26:4548703-4548853 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 655-972 |
| Cow position: | chr26:8809970-8810308 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 70, 261 |
| Conread position: | 658-815 |
| Cow position: | chr26:1885109-1885270 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 660-789 |
| Cow position: | chr26:19873487-19873352 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 661-815 |
| Cow position: | chr26:12551890-12551730 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 661-842 |
| Cow position: | chr26:386779-386965 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 663-794 |
| Cow position: | chr26:18934293-18934158 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 667-812 |
| Cow position: | chr26:27987486-27987335 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 671-895 |
| Cow position: | chr26:4600028-4599781 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 98 |
| Conread position: | 673-815 |
| Cow position: | chr26:3833145-3833292 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 683-791 |
| Cow position: | chr26:3722571-3722683 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 684-800 |
| Cow position: | chr26:6038560-6038440 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 697-815 |
| Cow position: | chr26:6844085-6843962 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 775-938 |
| Cow position: | chr26:14291048-14291207 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 791-972 |
| Cow position: | chr26:20496797-20496981 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 71, 113 |
Show alignments to all cow chromosomes.