Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 1-329 |
| Cow position: | chr1:29904645-29904310 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 1-680 |
| Cow position: | chr1:27306537-27305848 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 48 |
| Conread position: | 5-328 |
| Cow position: | chr1:69063235-69062911 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 5-637 |
| Cow position: | chr1:33387727-33388391 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 19-288 |
| Cow position: | chr1:19993240-19992968 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 19-289 |
| Cow position: | chr1:93416079-93416345 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 140, 27 |
| Conread position: | 19-684 |
| Cow position: | chr1:61739042-61738370 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 21-684 |
| Cow position: | chr1:99021512-99020816 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 43-319 |
| Cow position: | chr1:39482736-39482463 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 50-316 |
| Cow position: | chr1:68219380-68219114 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 131, 7 |
| Conread position: | 58-702 |
| Cow position: | chr1:21357114-21356478 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 140 |
| Conread position: | 88-683 |
| Cow position: | chr1:31422707-31422118 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 315-627 |
| Cow position: | chr1:40513738-40513415 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 315-685 |
| Cow position: | chr1:19992913-19992538 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 18 |
| Conread position: | 327-684 |
| Cow position: | chr1:91893342-91892975 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 331-684 |
| Cow position: | chr1:82355503-82355863 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 72, 210 |
| Conread position: | 332-461 |
| Cow position: | chr1:68219067-68218936 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 332-656 |
| Cow position: | chr1:59674265-59674594 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 332-668 |
| Cow position: | chr1:28801650-28801291 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 332-683 |
| Cow position: | chr1:45097484-45097839 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 332-683 |
| Cow position: | chr1:86608977-86609331 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 124, 69 |
| Conread position: | 332-683 |
| Cow position: | chr1:99349242-99348895 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 332-684 |
| Cow position: | chr1:38414584-38414944 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 332-684 |
| Cow position: | chr1:40307843-40308206 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 332-684 |
| Cow position: | chr1:57661317-57661661 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 332-684 |
| Cow position: | chr1:82918882-82918518 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 121, 93 |
| Conread position: | 332-684 |
| Cow position: | chr1:86699442-86699074 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 208 |
| Conread position: | 332-687 |
| Cow position: | chr1:72136419-72136785 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 80, 76 |
| Conread position: | 332-688 |
| Cow position: | chr1:101858204-101857835 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 332-689 |
| Cow position: | chr1:89899925-89899553 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 332-690 |
| Cow position: | chr1:30027765-30027396 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 125, 238 |
| Conread position: | 332-691 |
| Cow position: | chr1:52918838-52918464 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 332-696 |
| Cow position: | chr1:98783830-98784207 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 88, 184 |
| Conread position: | 332-698 |
| Cow position: | chr1:13645507-13645871 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 332-699 |
| Cow position: | chr1:5318539-5318906 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 332-699 |
| Cow position: | chr1:18406414-18406037 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 71, 163 |
| Conread position: | 332-699 |
| Cow position: | chr1:42290168-42290546 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 50, 167 |
| Conread position: | 332-699 |
| Cow position: | chr1:72656758-72657145 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 332-699 |
| Cow position: | chr1:101149619-101149991 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 332-709 |
| Cow position: | chr1:88635151-88635540 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 73 |
| Conread position: | 333-631 |
| Cow position: | chr1:62806029-62805715 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 333-652 |
| Cow position: | chr1:69922686-69922354 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 192 |
| Conread position: | 333-683 |
| Cow position: | chr1:3386229-3385864 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 55 |
| Conread position: | 333-684 |
| Cow position: | chr1:28872854-28873217 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 207 |
| Conread position: | 333-684 |
| Cow position: | chr1:39543548-39543912 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 196 |
| Conread position: | 333-684 |
| Cow position: | chr1:42736234-42736596 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 206 |
| Conread position: | 333-684 |
| Cow position: | chr1:49974414-49974047 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 333-684 |
| Cow position: | chr1:55276709-55276342 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 196 |
| Conread position: | 333-684 |
| Cow position: | chr1:56144553-56144195 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 333-684 |
| Cow position: | chr1:58335613-58335978 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 333-684 |
| Cow position: | chr1:72187094-72186729 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 333-684 |
| Cow position: | chr1:72981044-72981410 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 72, 207 |
| Conread position: | 333-684 |
| Cow position: | chr1:76545763-76545396 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-684 |
| Cow position: | chr1:76623168-76622814 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 142, 79 |
| Conread position: | 333-684 |
| Cow position: | chr1:79336027-79335661 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 63, 164 |
| Conread position: | 333-684 |
| Cow position: | chr1:79457190-79456829 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 66, 164 |
| Conread position: | 333-684 |
| Cow position: | chr1:93854297-93854664 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 333-684 |
| Cow position: | chr1:97226923-97226562 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 118, 159 |
| Conread position: | 333-684 |
| Cow position: | chr1:100597605-100597230 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 162 |
| Conread position: | 333-684 |
| Cow position: | chr1:102435251-102434895 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 124 |
| Conread position: | 333-686 |
| Cow position: | chr1:40053132-40053501 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 199 |
| Conread position: | 333-689 |
| Cow position: | chr1:67835361-67834991 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 263 |
| Conread position: | 333-696 |
| Cow position: | chr1:33550700-33551076 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 79, 160 |
| Conread position: | 333-696 |
| Cow position: | chr1:63606006-63605624 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 333-696 |
| Cow position: | chr1:71562798-71562417 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 333-696 |
| Cow position: | chr1:80359389-80359023 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 79 |
| Conread position: | 333-696 |
| Cow position: | chr1:85791469-85791843 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 333-696 |
| Cow position: | chr1:86548354-86547978 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-696 |
| Cow position: | chr1:89770904-89770528 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 333-699 |
| Cow position: | chr1:8554105-8554487 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr1:17012959-17012580 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 196 |
| Conread position: | 333-699 |
| Cow position: | chr1:20828666-20829048 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr1:33851056-33851437 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 180 |
| Conread position: | 333-699 |
| Cow position: | chr1:33895456-33895838 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-699 |
| Cow position: | chr1:56489616-56489999 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 200 |
| Conread position: | 333-699 |
| Cow position: | chr1:61308779-61309161 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-699 |
| Cow position: | chr1:62244869-62244489 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 333-699 |
| Cow position: | chr1:69766242-69766621 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 333-699 |
| Cow position: | chr1:79920950-79920568 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr1:89425367-89425746 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 333-703 |
| Cow position: | chr1:22000180-21999795 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 208 |
| Conread position: | 333-703 |
| Cow position: | chr1:76752873-76752491 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 61 |
| Conread position: | 333-703 |
| Cow position: | chr1:82564281-82564666 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 333-704 |
| Cow position: | chr1:40684913-40684527 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 66, 195 |
| Conread position: | 333-714 |
| Cow position: | chr1:56163106-56163498 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-733 |
| Cow position: | chr1:69402769-69403184 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 207 |
| Conread position: | 334-619 |
| Cow position: | chr1:102549011-102549305 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 334-733 |
| Cow position: | chr1:25549841-25550249 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 65, 206 |
| Conread position: | 335-684 |
| Cow position: | chr1:25180252-25179887 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 205 |
| Conread position: | 335-685 |
| Cow position: | chr1:8824841-8825195 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 138, 77 |
| Conread position: | 336-680 |
| Cow position: | chr1:29950527-29950181 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 202 |
| Conread position: | 336-708 |
| Cow position: | chr1:87244579-87244977 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 118, 60 |
| Conread position: | 337-746 |
| Cow position: | chr1:31366296-31365871 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 53, 202 |
| Conread position: | 339-693 |
| Cow position: | chr1:13879918-13880290 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 341-684 |
| Cow position: | chr1:18014402-18014045 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 342-682 |
| Cow position: | chr1:72080558-72080920 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 342-684 |
| Cow position: | chr1:52359490-52359134 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 57, 198 |
| Conread position: | 343-684 |
| Cow position: | chr1:57367345-57366989 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 79, 196 |
| Conread position: | 355-699 |
| Cow position: | chr1:30283737-30283384 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 363-683 |
| Cow position: | chr1:85533599-85533272 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 39, 159 |
| Conread position: | 368-684 |
| Cow position: | chr1:73009612-73009935 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 204 |
| Conread position: | 371-678 |
| Cow position: | chr1:53045966-53045651 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 184 |
| Conread position: | 372-682 |
| Cow position: | chr1:79109113-79109423 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 372-697 |
| Cow position: | chr1:25887329-25887009 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 373-682 |
| Cow position: | chr1:39482159-39481841 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 373-683 |
| Cow position: | chr1:54366000-54365684 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 374-684 |
| Cow position: | chr1:23050658-23050980 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 374-699 |
| Cow position: | chr1:52233293-52232957 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 375-682 |
| Cow position: | chr1:77163600-77163906 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 375-683 |
| Cow position: | chr1:31330965-31330648 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 375-683 |
| Cow position: | chr1:34689161-34689482 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 375-696 |
| Cow position: | chr1:38385462-38385131 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 88, 33 |
| Conread position: | 375-696 |
| Cow position: | chr1:57656377-57656701 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 375-707 |
| Cow position: | chr1:99374792-99375127 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 138 |
| Conread position: | 377-613 |
| Cow position: | chr1:32361292-32361047 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 377-682 |
| Cow position: | chr1:69287737-69287426 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 384-712 |
| Cow position: | chr1:59933382-59933715 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 385-684 |
| Cow position: | chr1:79637100-79636787 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 386-684 |
| Cow position: | chr1:15025739-15026035 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 386-684 |
| Cow position: | chr1:44101913-44101604 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 155 |
| Conread position: | 386-696 |
| Cow position: | chr1:13450043-13450364 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 386-703 |
| Cow position: | chr1:80556222-80555910 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 392-682 |
| Cow position: | chr1:30058379-30058683 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 394-696 |
| Cow position: | chr1:59644695-59644996 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 395-684 |
| Cow position: | chr1:12062357-12062053 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 399-699 |
| Cow position: | chr1:62853997-62853687 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 411-703 |
| Cow position: | chr1:48245668-48245976 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 462-699 |
| Cow position: | chr1:29362214-29362455 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 469-682 |
| Cow position: | chr1:46835450-46835665 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 472-684 |
| Cow position: | chr1:20988880-20989095 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 131, 89 |
| Conread position: | 477-682 |
| Cow position: | chr1:32342144-32341934 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 494-684 |
| Cow position: | chr1:58884118-58883924 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 504-684 |
| Cow position: | chr1:89479281-89479459 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.