Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 5-291 |
| Cow position: | chr12:17974924-17975204 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 41 |
| Conread position: | 314-682 |
| Cow position: | chr12:17975263-17975627 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 331-703 |
| Cow position: | chr12:21901670-21902050 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 332-699 |
| Cow position: | chr12:22332347-22332732 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 332-708 |
| Cow position: | chr12:2523-2914 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 333-682 |
| Cow position: | chr12:14662885-14662543 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 333-684 |
| Cow position: | chr12:6406921-6406556 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 188 |
| Conread position: | 333-684 |
| Cow position: | chr12:11097967-11098334 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 165 |
| Conread position: | 333-684 |
| Cow position: | chr12:25101333-25100969 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 333-684 |
| Cow position: | chr12:42860089-42859735 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 66, 203 |
| Conread position: | 333-697 |
| Cow position: | chr12:28766291-28765912 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 66, 203 |
| Conread position: | 333-699 |
| Cow position: | chr12:21254930-21254549 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr12:21426422-21426801 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 118, 62 |
| Conread position: | 333-699 |
| Cow position: | chr12:37558285-37558662 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 333-703 |
| Cow position: | chr12:8678393-8678011 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 63 |
| Conread position: | 333-703 |
| Cow position: | chr12:20998394-20998021 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 205 |
| Conread position: | 333-706 |
| Cow position: | chr12:43031657-43031270 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-708 |
| Cow position: | chr12:32653273-32653659 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-712 |
| Cow position: | chr12:27933220-27932822 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 207 |
| Conread position: | 333-714 |
| Cow position: | chr12:21207423-21207814 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 335-696 |
| Cow position: | chr12:2282274-2282651 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 81 |
| Conread position: | 354-669 |
| Cow position: | chr12:45261361-45261692 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 361-684 |
| Cow position: | chr12:1137347-1137678 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 361-684 |
| Cow position: | chr12:8982659-8982331 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 375-683 |
| Cow position: | chr12:21499886-21500199 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 376-699 |
| Cow position: | chr12:8310954-8311288 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 382-703 |
| Cow position: | chr12:3360678-3361015 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 385-684 |
| Cow position: | chr12:26947202-26946900 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 504-703 |
| Cow position: | chr12:23163491-23163304 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 184, 56 |
Show alignments to all cow chromosomes.