Cow genome map

Conread name: Ss1.1-LyN1-MLN01G120009.5

Conread position: 5-264
Cow position: chr15:32671680-32671949 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 143, 41

Conread position: 5-599
Cow position: chr15:32286317-32286926 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 41

Conread position: 13-684
Cow position: chr15:21960568-21961256 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 292

Conread position: 17-699
Cow position: chr15:36647977-36648671 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 428
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 202, 187

Conread position: 81-676
Cow position: chr15:7789239-7788629 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 110

Conread position: 88-644
Cow position: chr15:496191-496773 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 12

Conread position: 322-699
Cow position: chr15:4195834-4196227 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 238

Conread position: 326-684
Cow position: chr15:4630533-4630167 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 89

Conread position: 327-682
Cow position: chr15:1253690-1254043 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 130, 69

Conread position: 331-699
Cow position: chr15:3038140-3037750 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 177

Conread position: 332-633
Cow position: chr15:8000861-8000548 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 76

Conread position: 332-669
Cow position: chr15:2006921-2007276 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 218

Conread position: 332-681
Cow position: chr15:45886187-45886535 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 148, 83

Conread position: 332-682
Cow position: chr15:21816366-21815998 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 59, 197

Conread position: 332-696
Cow position: chr15:4733246-4733622 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 71, 18

Conread position: 332-699
Cow position: chr15:4670804-4671192 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 20

Conread position: 332-699
Cow position: chr15:23157446-23157068 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 163

Conread position: 332-699
Cow position: chr15:35747677-35748057 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 71, 171

Conread position: 332-699
Cow position: chr15:40104852-40105228 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 85

Conread position: 332-703
Cow position: chr15:4170310-4169931 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 122, 295

Conread position: 332-703
Cow position: chr15:32680164-32679787 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 35

Conread position: 332-707
Cow position: chr15:6277874-6277489 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 170

Conread position: 332-714
Cow position: chr15:35734842-35735232 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 119, 73

Conread position: 332-715
Cow position: chr15:3843439-3843048 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 255
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 93

Conread position: 333-663
Cow position: chr15:6472528-6472182 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 333-668
Cow position: chr15:55583-55934 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 333-681
Cow position: chr15:1519761-1519404 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 79

Conread position: 333-681
Cow position: chr15:1771884-1772244 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 79

Conread position: 333-683
Cow position: chr15:17039869-17039506 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 206

Conread position: 333-683
Cow position: chr15:24793439-24793795 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 120, 85

Conread position: 333-684
Cow position: chr15:2076039-2076396 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 36

Conread position: 333-684
Cow position: chr15:4764595-4764954 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 76, 188

Conread position: 333-684
Cow position: chr15:7233694-7234049 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 165

Conread position: 333-684
Cow position: chr15:8749815-8750175 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 161

Conread position: 333-684
Cow position: chr15:15347738-15347371 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 58, 207

Conread position: 333-684
Cow position: chr15:18333445-18333079 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 207

Conread position: 333-684
Cow position: chr15:19738667-19738305 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 117, 66

Conread position: 333-684
Cow position: chr15:32495003-32494637 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 206

Conread position: 333-684
Cow position: chr15:38979300-38979668 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 231

Conread position: 333-684
Cow position: chr15:42490587-42490952 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 207

Conread position: 333-684
Cow position: chr15:42936096-42936462 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 65, 82

Conread position: 333-684
Cow position: chr15:51215976-51216337 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 172

Conread position: 333-690
Cow position: chr15:2011467-2011837 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 26

Conread position: 333-696
Cow position: chr15:18576106-18576476 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 147

Conread position: 333-696
Cow position: chr15:21666364-21665984 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 207

Conread position: 333-699
Cow position: chr15:13428426-13428803 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 68

Conread position: 333-699
Cow position: chr15:17080806-17080437 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 242
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 66, 82

Conread position: 333-699
Cow position: chr15:20748798-20749179 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 66, 196

Conread position: 333-699
Cow position: chr15:50124553-50124175 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 66, 82

Conread position: 333-700
Cow position: chr15:7544262-7544645 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 165

Conread position: 333-703
Cow position: chr15:6156581-6156186 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 254
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 115

Conread position: 333-703
Cow position: chr15:6554470-6554087 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 333-703
Cow position: chr15:18268605-18268219 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 257
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 230

Conread position: 333-703
Cow position: chr15:24294473-24294859 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 207

Conread position: 333-710
Cow position: chr15:28490761-28490367 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 256
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 79

Conread position: 334-672
Cow position: chr15:324331-324681 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 47

Conread position: 335-663
Cow position: chr15:3262020-3261679 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 77

Conread position: 335-684
Cow position: chr15:12421779-12421417 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 73

Conread position: 335-699
Cow position: chr15:41365567-41365944 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 101

Conread position: 336-696
Cow position: chr15:7260013-7260388 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 68, 162

Conread position: 340-684
Cow position: chr15:11624309-11624659 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 200

Conread position: 360-682
Cow position: chr15:20357851-20357538 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 58

Conread position: 363-682
Cow position: chr15:36642043-36642361 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 42

Conread position: 375-673
Cow position: chr15:690219-690528 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 35

Conread position: 375-683
Cow position: chr15:53338462-53338776 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 124

Conread position: 375-684
Cow position: chr15:4384699-4385016 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 123

Conread position: 375-684
Cow position: chr15:4649261-4649575 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 165

Conread position: 375-684
Cow position: chr15:10479275-10478948 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 375-684
Cow position: chr15:17787733-17787418 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 38

Conread position: 375-708
Cow position: chr15:17291880-17292210 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 30, 72

Conread position: 376-764
Cow position: chr15:1662808-1663198 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 268
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 35

Conread position: 378-682
Cow position: chr15:8407990-8408300 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 90

Conread position: 379-702
Cow position: chr15:49676456-49676780 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 123

Conread position: 382-684
Cow position: chr15:12614497-12614817 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 385-696
Cow position: chr15:3010414-3010087 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 27

Conread position: 386-678
Cow position: chr15:17219433-17219131 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 25

Conread position: 392-699
Cow position: chr15:18023338-18023022 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 145

Conread position: 394-696
Cow position: chr15:7928070-7928382 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 123

Conread position: 402-697
Cow position: chr15:51671810-51672109 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 10

Conread position: 407-659
Cow position: chr15:2676828-2676578 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 16

Conread position: 463-684
Cow position: chr15:32672401-32672637 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 465-699
Cow position: chr15:7522962-7522729 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 30, 21

Conread position: 466-703
Cow position: chr15:4681757-4682000 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 102

Conread position: 474-699
Cow position: chr15:25789433-25789205 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 173

Conread position: 475-684
Cow position: chr15:7922105-7921892 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 516-699
Cow position: chr15:24715807-24715988 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 45

Show alignments to all cow chromosomes.