Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 5-682 |
| Cow position: | chr19:7405945-7405286 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 7-288 |
| Cow position: | chr19:7450519-7450244 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 174, 57 |
| Conread position: | 19-277 |
| Cow position: | chr19:20111741-20111482 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 157-699 |
| Cow position: | chr19:772232-772805 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 363 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 319-658 |
| Cow position: | chr19:20111408-20111071 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 7 |
| Conread position: | 320-664 |
| Cow position: | chr19:32183631-32183291 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 326-684 |
| Cow position: | chr19:28581837-28581468 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 327-681 |
| Cow position: | chr19:7450179-7449835 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 327-696 |
| Cow position: | chr19:32202576-32202952 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 332-655 |
| Cow position: | chr19:29209390-29209721 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 332-684 |
| Cow position: | chr19:30372106-30372465 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 332-684 |
| Cow position: | chr19:32665356-32665721 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 332-699 |
| Cow position: | chr19:416476-416867 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 332-699 |
| Cow position: | chr19:1031932-1032281 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 332-699 |
| Cow position: | chr19:35979092-35979471 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 332-716 |
| Cow position: | chr19:39546451-39546852 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 119, 73 |
| Conread position: | 333-669 |
| Cow position: | chr19:170916-170570 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 333-676 |
| Cow position: | chr19:28593100-28593464 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 41, 197 |
| Conread position: | 333-682 |
| Cow position: | chr19:7488137-7488502 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 333-684 |
| Cow position: | chr19:172035-172402 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 77, 165 |
| Conread position: | 333-684 |
| Cow position: | chr19:203788-204152 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 71, 204 |
| Conread position: | 333-684 |
| Cow position: | chr19:4385309-4385671 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 161 |
| Conread position: | 333-684 |
| Cow position: | chr19:10672482-10672115 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 66, 165 |
| Conread position: | 333-684 |
| Cow position: | chr19:32212243-32211882 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-684 |
| Cow position: | chr19:33941436-33941801 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 333-684 |
| Cow position: | chr19:55078570-55078937 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 92, 207 |
| Conread position: | 333-696 |
| Cow position: | chr19:39390346-39390713 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 118, 26 |
| Conread position: | 333-699 |
| Cow position: | chr19:43143543-43143922 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-703 |
| Cow position: | chr19:7341897-7342278 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 333-746 |
| Cow position: | chr19:40852606-40852185 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 66, 207 |
| Conread position: | 339-699 |
| Cow position: | chr19:359672-359304 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 354-684 |
| Cow position: | chr19:42299651-42299306 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 354-708 |
| Cow position: | chr19:34270-34630 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 97, 22 |
| Conread position: | 361-696 |
| Cow position: | chr19:40887791-40887448 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 375-620 |
| Cow position: | chr19:28376397-28376645 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 375-710 |
| Cow position: | chr19:15953728-15954071 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 82, 7 |
| Conread position: | 376-696 |
| Cow position: | chr19:42248682-42249009 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 149 |
| Conread position: | 377-712 |
| Cow position: | chr19:30755045-30755402 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 388-684 |
| Cow position: | chr19:33873311-33873617 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 412-682 |
| Cow position: | chr19:6553518-6553791 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 157 |
| Conread position: | 474-674 |
| Cow position: | chr19:18728834-18729031 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 477-684 |
| Cow position: | chr19:32237702-32237491 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 516-685 |
| Cow position: | chr19:20104732-20104904 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 34 |
Show alignments to all cow chromosomes.