Cow genome map

Conread name: Ss1.1-LyN1-MLN01G120009.5

Conread position: 5-167
Cow position: chr2:45924006-45923845 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 41

Conread position: 5-222
Cow position: chr2:4275056-4274837 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 54

Conread position: 5-264
Cow position: chr2:32436417-32436168 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 61

Conread position: 5-288
Cow position: chr2:11724757-11725039 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 45

Conread position: 5-683
Cow position: chr2:50402239-50402901 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 54

Conread position: 5-684
Cow position: chr2:11691166-11691817 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 49

Conread position: 17-703
Cow position: chr2:41171645-41172330 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 433
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 128

Conread position: 19-723
Cow position: chr2:77207606-77208314 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 67-460
Cow position: chr2:45969487-45969103 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 137

Conread position: 306-684
Cow position: chr2:45922003-45921625 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 5

Conread position: 311-699
Cow position: chr2:34565681-34565281 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 265
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 21

Conread position: 315-703
Cow position: chr2:85356517-85356119 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 88, 14

Conread position: 319-663
Cow position: chr2:782481-782140 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 89

Conread position: 319-664
Cow position: chr2:34475625-34475292 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 18

Conread position: 319-696
Cow position: chr2:15580725-15580338 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 11

Conread position: 321-700
Cow position: chr2:82166873-82167258 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 10

Conread position: 326-645
Cow position: chr2:4235436-4235763 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 217

Conread position: 326-682
Cow position: chr2:36991149-36991520 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 28

Conread position: 327-684
Cow position: chr2:72109257-72108897 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 40, 146

Conread position: 327-684
Cow position: chr2:72922568-72922198 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 76, 65

Conread position: 327-699
Cow position: chr2:80956382-80955988 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 208

Conread position: 327-720
Cow position: chr2:14560458-14560861 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 173

Conread position: 332-676
Cow position: chr2:3730000-3730356 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 82, 157

Conread position: 332-682
Cow position: chr2:3749175-3749538 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 60

Conread position: 332-684
Cow position: chr2:10712165-10711803 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 91

Conread position: 332-684
Cow position: chr2:20874886-20874544 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 96

Conread position: 332-684
Cow position: chr2:20876348-20876006 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 96

Conread position: 332-684
Cow position: chr2:67430332-67430678 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 71

Conread position: 332-696
Cow position: chr2:32458741-32458361 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 92

Conread position: 332-699
Cow position: chr2:46945938-46946316 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 119, 73

Conread position: 332-699
Cow position: chr2:52655739-52656113 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 131, 73

Conread position: 332-703
Cow position: chr2:44345981-44346368 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 332-708
Cow position: chr2:6772896-6772515 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 14

Conread position: 333-603
Cow position: chr2:25888937-25888658 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 62

Conread position: 333-659
Cow position: chr2:10733568-10733233 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 97

Conread position: 333-678
Cow position: chr2:32654618-32654962 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 33

Conread position: 333-681
Cow position: chr2:11159860-11159496 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 333-683
Cow position: chr2:41685780-41686148 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 83, 68

Conread position: 333-684
Cow position: chr2:283426-283059 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 207

Conread position: 333-684
Cow position: chr2:976004-975644 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 77

Conread position: 333-684
Cow position: chr2:6960012-6960379 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 207

Conread position: 333-684
Cow position: chr2:39420862-39421211 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 271, 79

Conread position: 333-684
Cow position: chr2:41656355-41656716 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 68

Conread position: 333-684
Cow position: chr2:44935812-44935454 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 113, 33

Conread position: 333-684
Cow position: chr2:47810282-47810644 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 53

Conread position: 333-684
Cow position: chr2:50076871-50077229 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 161

Conread position: 333-684
Cow position: chr2:52061936-52062300 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 148, 79

Conread position: 333-684
Cow position: chr2:56438453-56438093 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 53

Conread position: 333-684
Cow position: chr2:57334471-57334830 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 229
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 118, 72

Conread position: 333-684
Cow position: chr2:59414413-59414047 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 66, 227

Conread position: 333-684
Cow position: chr2:65939180-65938816 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 206

Conread position: 333-685
Cow position: chr2:53329018-53329380 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 63

Conread position: 333-696
Cow position: chr2:44992013-44991634 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 10

Conread position: 333-699
Cow position: chr2:2184990-2184608 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 333-699
Cow position: chr2:2413530-2413148 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 66, 230

Conread position: 333-699
Cow position: chr2:4405081-4404699 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 333-699
Cow position: chr2:9907180-9907561 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 66, 57

Conread position: 333-699
Cow position: chr2:25031209-25030827 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 333-699
Cow position: chr2:26865276-26864907 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 151

Conread position: 333-699
Cow position: chr2:44090566-44090948 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 82

Conread position: 333-699
Cow position: chr2:52615738-52616121 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 65, 82

Conread position: 333-703
Cow position: chr2:19009500-19009885 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 207

Conread position: 333-703
Cow position: chr2:42672117-42671733 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 99

Conread position: 333-707
Cow position: chr2:10186955-10186578 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 254
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 59

Conread position: 334-706
Cow position: chr2:78741402-78741785 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 81

Conread position: 335-684
Cow position: chr2:24145545-24145908 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 87

Conread position: 335-684
Cow position: chr2:28650956-28650594 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 253

Conread position: 335-684
Cow position: chr2:50983959-50983595 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 183

Conread position: 335-699
Cow position: chr2:202382-202011 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 328

Conread position: 344-684
Cow position: chr2:7210983-7211332 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 227

Conread position: 354-658
Cow position: chr2:41149333-41149650 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 58

Conread position: 354-699
Cow position: chr2:26868564-26868916 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 97, 48

Conread position: 361-700
Cow position: chr2:52680723-52681072 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 51

Conread position: 368-699
Cow position: chr2:10294433-10294776 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 35, 283

Conread position: 373-684
Cow position: chr2:20921473-20921155 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 13

Conread position: 373-705
Cow position: chr2:50321606-50321932 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 222, 38

Conread position: 374-699
Cow position: chr2:212907-212571 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 35

Conread position: 375-664
Cow position: chr2:38372151-38372444 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 157

Conread position: 375-684
Cow position: chr2:7901592-7901916 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 11

Conread position: 375-684
Cow position: chr2:43958934-43959239 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 105, 12

Conread position: 375-684
Cow position: chr2:52174006-52173693 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 375-684
Cow position: chr2:78761787-78762106 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 79, 21

Conread position: 375-699
Cow position: chr2:2102156-2101822 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 21

Conread position: 375-699
Cow position: chr2:16288561-16288876 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 120

Conread position: 375-703
Cow position: chr2:5905539-5905209 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 123

Conread position: 377-593
Cow position: chr2:3439700-3439923 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 137

Conread position: 377-684
Cow position: chr2:1673337-1673033 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 15

Conread position: 377-690
Cow position: chr2:53552486-53552812 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 56

Conread position: 382-718
Cow position: chr2:769069-768729 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 18

Conread position: 385-703
Cow position: chr2:36979702-36980027 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 68, 27

Conread position: 385-708
Cow position: chr2:10730236-10729900 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 50

Conread position: 386-685
Cow position: chr2:11725170-11725477 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 28

Conread position: 389-682
Cow position: chr2:35352701-35352997 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 389-684
Cow position: chr2:38589504-38589789 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 19

Conread position: 395-703
Cow position: chr2:53473825-53473505 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 12

Conread position: 474-699
Cow position: chr2:422490-422715 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 165

Conread position: 485-690
Cow position: chr2:39621723-39621928 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 64

Conread position: 488-711
Cow position: chr2:3837551-3837338 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 129

Conread position: 506-696
Cow position: chr2:290379-290185 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 108

Show alignments to all cow chromosomes.