Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 5-319 |
| Cow position: | chr24:6047712-6048026 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 20-289 |
| Cow position: | chr24:14873868-14873599 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 38-678 |
| Cow position: | chr24:39677933-39678583 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 414 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 49-684 |
| Cow position: | chr24:149090-148439 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 402 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 119 |
| Conread position: | 319-684 |
| Cow position: | chr24:6048058-6048439 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 7 |
| Conread position: | 319-714 |
| Cow position: | chr24:14873540-14873142 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 332-602 |
| Cow position: | chr24:12288910-12288635 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 122, 78 |
| Conread position: | 332-677 |
| Cow position: | chr24:17187358-17187713 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 332-678 |
| Cow position: | chr24:35841801-35841449 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 332-699 |
| Cow position: | chr24:35838813-35838421 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 166 |
| Conread position: | 332-712 |
| Cow position: | chr24:12568065-12568443 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 332-714 |
| Cow position: | chr24:12797948-12797560 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 333-668 |
| Cow position: | chr24:7060915-7061264 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 164 |
| Conread position: | 333-684 |
| Cow position: | chr24:16084847-16084480 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-684 |
| Cow position: | chr24:19833197-19833565 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 333-684 |
| Cow position: | chr24:33933181-33933546 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 333-696 |
| Cow position: | chr24:9188918-9188539 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr24:6025283-6024900 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 333-699 |
| Cow position: | chr24:6083830-6084212 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 66, 196 |
| Conread position: | 333-699 |
| Cow position: | chr24:6434054-6434435 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 230 |
| Conread position: | 333-699 |
| Cow position: | chr24:8029964-8030346 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr24:44017359-44017741 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-703 |
| Cow position: | chr24:12086013-12086397 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 333-705 |
| Cow position: | chr24:22792990-22793375 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 118, 68 |
| Conread position: | 333-709 |
| Cow position: | chr24:14390908-14390530 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 333-718 |
| Cow position: | chr24:15392490-15392118 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 118, 66 |
| Conread position: | 333-721 |
| Cow position: | chr24:12114220-12113827 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 334-590 |
| Cow position: | chr24:6511315-6511046 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 125, 52 |
| Conread position: | 354-699 |
| Cow position: | chr24:14584929-14585271 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 375-667 |
| Cow position: | chr24:9092418-9092114 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 375-684 |
| Cow position: | chr24:22951991-22952316 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 375-731 |
| Cow position: | chr24:14885378-14885028 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 383-690 |
| Cow position: | chr24:6335562-6335876 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 395-681 |
| Cow position: | chr24:36297036-36297345 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 423-683 |
| Cow position: | chr24:38635666-38635933 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 152 |
| Conread position: | 433-684 |
| Cow position: | chr24:40654306-40654566 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 91 |
Show alignments to all cow chromosomes.