Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 20-684 |
| Cow position: | chr25:3379274-3378621 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 25 |
| Conread position: | 329-699 |
| Cow position: | chr25:18060820-18060449 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 332-663 |
| Cow position: | chr25:20494131-20494473 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 134, 67 |
| Conread position: | 332-690 |
| Cow position: | chr25:36240316-36240698 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 332-691 |
| Cow position: | chr25:18092788-18093162 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 332-699 |
| Cow position: | chr25:14015946-14016316 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 332-699 |
| Cow position: | chr25:17468924-17468547 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 332-699 |
| Cow position: | chr25:18027860-18027474 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 168 |
| Conread position: | 333-676 |
| Cow position: | chr25:17589778-17589420 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 66, 195 |
| Conread position: | 333-682 |
| Cow position: | chr25:26279036-26279391 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 206 |
| Conread position: | 333-683 |
| Cow position: | chr25:19916853-19917219 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 230 |
| Conread position: | 333-684 |
| Cow position: | chr25:13780806-13781166 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 333-684 |
| Cow position: | chr25:18890245-18889880 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 207 |
| Conread position: | 333-684 |
| Cow position: | chr25:22147265-22147631 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 333-684 |
| Cow position: | chr25:25506420-25506786 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 207 |
| Conread position: | 333-690 |
| Cow position: | chr25:18276054-18275691 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 333-696 |
| Cow position: | chr25:20629347-20629721 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 328 |
| Conread position: | 333-699 |
| Cow position: | chr25:12759824-12759446 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 333-699 |
| Cow position: | chr25:35362649-35362278 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 72 |
| Conread position: | 333-703 |
| Cow position: | chr25:8674685-8675071 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 339-696 |
| Cow position: | chr25:32579743-32580115 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 374-676 |
| Cow position: | chr25:11933714-11933402 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 375-633 |
| Cow position: | chr25:19288535-19288270 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 375-664 |
| Cow position: | chr25:17615451-17615154 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 375-684 |
| Cow position: | chr25:13454980-13454670 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 392-712 |
| Cow position: | chr25:18255532-18255200 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 177 |
| Conread position: | 425-703 |
| Cow position: | chr25:12942837-12942545 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 472-690 |
| Cow position: | chr25:23345419-23345195 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 495-696 |
| Cow position: | chr25:18421612-18421816 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 167 |
Show alignments to all cow chromosomes.