Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 5-130 |
| Cow position: | chr27:6012570-6012695 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 5-271 |
| Cow position: | chr27:24560584-24560848 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 322-633 |
| Cow position: | chr27:3996659-3996332 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 327-527 |
| Cow position: | chr27:24560940-24561149 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 332-684 |
| Cow position: | chr27:25002800-25002442 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 119, 73 |
| Conread position: | 332-699 |
| Cow position: | chr27:16439057-16439437 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 333-644 |
| Cow position: | chr27:25805153-25804829 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-683 |
| Cow position: | chr27:14460728-14460363 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 333-684 |
| Cow position: | chr27:892940-893301 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 333-684 |
| Cow position: | chr27:5910595-5910957 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 333-684 |
| Cow position: | chr27:9993473-9993111 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 333-684 |
| Cow position: | chr27:23334891-23335256 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-699 |
| Cow position: | chr27:2364479-2364859 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-699 |
| Cow position: | chr27:15541056-15541438 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 333-699 |
| Cow position: | chr27:16034665-16034285 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-703 |
| Cow position: | chr27:1209079-1209464 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 66, 207 |
| Conread position: | 333-703 |
| Cow position: | chr27:26324542-26324928 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 208 |
| Conread position: | 342-696 |
| Cow position: | chr27:28890468-28890833 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 380-675 |
| Cow position: | chr27:6013214-6013514 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 385-673 |
| Cow position: | chr27:21288441-21288154 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 179 |
| Conread position: | 472-682 |
| Cow position: | chr27:16432303-16432512 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 480-703 |
| Cow position: | chr27:27753310-27753083 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 493-703 |
| Cow position: | chr27:27051581-27051789 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 516-684 |
| Cow position: | chr27:26035133-26034961 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.