Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
| Conread position: | 5-176 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-248 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 5-526 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 17-288 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 17-289 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 19-681 |
| Cow position: | |
| Alignm length: | 692 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 21-237 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 157-682 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 247-746 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 313-714 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 318-684 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 318-685 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 15 |
| Conread position: | 319-623 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 137, 7 |
| Conread position: | 319-684 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 7 |
| Conread position: | 327-613 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 327-682 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 73 |
| Conread position: | 327-684 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 285 |
| Conread position: | 327-685 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 329-699 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 332-676 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 332-683 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 229 |
| Conread position: | 332-684 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 126, 164 |
| Conread position: | 332-696 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 71, 239 |
| Conread position: | 332-697 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 332-697 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 332-697 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 135, 49 |
| Conread position: | 332-699 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 332-699 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 71, 167 |
| Conread position: | 332-699 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 71, 166 |
| Conread position: | 332-699 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 332-699 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 215 |
| Conread position: | 332-702 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 131, 58 |
| Conread position: | 332-721 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 124 |
| Conread position: | 333-682 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 74, 213 |
| Conread position: | 333-682 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 78 |
| Conread position: | 333-683 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 72, 207 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 59 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 63, 172 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 207 |
| Conread position: | 333-684 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 333-696 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 84 |
| Conread position: | 333-696 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 333-696 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 333-696 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 118, 68 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 131, 68 |
| Conread position: | 333-699 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 333-703 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 333-703 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 58 |
| Conread position: | 333-703 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 160 |
| Conread position: | 333-708 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 66, 162 |
| Conread position: | 335-684 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 335-694 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 339-682 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 205 |
| Conread position: | 371-682 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 372-696 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 373-527 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 375-669 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 375-699 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 375-704 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 379-684 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 382-593 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 386-714 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 392-703 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 392-715 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 395-699 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 396-696 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 100 |
| Conread position: | 411-699 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 132 |
| Conread position: | 466-703 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 129, 92 |
| Conread position: | 472-684 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 84 |
| Conread position: | 472-699 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 472-749 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 16 |
| Conread position: | 484-681 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 495-699 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 191, 91 |
Show alignments to all cow chromosomes.