Cow genome map

Conread name: Ss1.1-LyN1-MLN01G120009.5

Conread position: 5-176
Cow position: chr7:41486783-41486948 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 5-248
Cow position: chr7:67811069-67811312 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 54

Conread position: 5-526
Cow position: chr7:41877043-41876504 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 62

Conread position: 17-288
Cow position: chr7:30120088-30119823 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 20

Conread position: 17-289
Cow position: chr7:30299582-30299859 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 43

Conread position: 19-681
Cow position: chr7:65497335-65496664 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 21-237
Cow position: chr7:42299412-42299192 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 45

Conread position: 157-682
Cow position: chr7:68084403-68084939 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 353
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 78

Conread position: 247-746
Cow position: chr7:26893442-26893965 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 303
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 313-714
Cow position: chr7:67811893-67812306 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 5

Conread position: 318-684
Cow position: chr7:30119764-30119389 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 8

Conread position: 318-685
Cow position: chr7:26851018-26851386 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 15

Conread position: 319-623
Cow position: chr7:41487366-41487671 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 137, 7

Conread position: 319-684
Cow position: chr7:59027792-59028148 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 7

Conread position: 327-613
Cow position: chr7:27531079-27530784 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 129, 42

Conread position: 327-682
Cow position: chr7:7297094-7296736 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 73

Conread position: 327-684
Cow position: chr7:63020633-63021001 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 285

Conread position: 327-685
Cow position: chr7:51084404-51084758 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 78, 63

Conread position: 329-699
Cow position: chr7:65339903-65339544 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 118

Conread position: 332-676
Cow position: chr7:68436260-68435900 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 332-683
Cow position: chr7:20307005-20306655 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 229

Conread position: 332-684
Cow position: chr7:6489523-6489166 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 126, 164

Conread position: 332-696
Cow position: chr7:23835907-23836286 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 239

Conread position: 332-697
Cow position: chr7:1357882-1357520 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 75

Conread position: 332-697
Cow position: chr7:1405645-1405272 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 125, 44

Conread position: 332-697
Cow position: chr7:39556302-39555929 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 135, 49

Conread position: 332-699
Cow position: chr7:102814-102435 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 106

Conread position: 332-699
Cow position: chr7:994020-994403 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 167

Conread position: 332-699
Cow position: chr7:21975950-21975569 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 71, 166

Conread position: 332-699
Cow position: chr7:26890592-26890974 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 22

Conread position: 332-699
Cow position: chr7:36085120-36085504 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 215

Conread position: 332-702
Cow position: chr7:24056076-24056452 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 58

Conread position: 332-721
Cow position: chr7:68858307-68857921 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 124

Conread position: 333-682
Cow position: chr7:10431638-10431267 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 213

Conread position: 333-682
Cow position: chr7:27786418-27786774 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 78

Conread position: 333-683
Cow position: chr7:1400568-1400208 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 66, 33

Conread position: 333-684
Cow position: chr7:446846-446478 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 13

Conread position: 333-684
Cow position: chr7:1372863-1372499 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 121, 90

Conread position: 333-684
Cow position: chr7:14139810-14139448 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 72, 207

Conread position: 333-684
Cow position: chr7:19925025-19924670 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 79

Conread position: 333-684
Cow position: chr7:21127864-21127509 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 59

Conread position: 333-684
Cow position: chr7:21235225-21234858 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 333-684
Cow position: chr7:21309995-21310358 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 21

Conread position: 333-684
Cow position: chr7:45949361-45948997 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 172

Conread position: 333-684
Cow position: chr7:46902290-46901927 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 207

Conread position: 333-684
Cow position: chr7:55538130-55537764 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 53

Conread position: 333-696
Cow position: chr7:35287771-35287393 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 104, 84

Conread position: 333-696
Cow position: chr7:47374783-47375162 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 333-696
Cow position: chr7:54602637-54603018 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 333-696
Cow position: chr7:64242150-64241781 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 40

Conread position: 333-699
Cow position: chr7:17086-16704 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 82

Conread position: 333-699
Cow position: chr7:6643086-6642709 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 243
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 118, 68

Conread position: 333-699
Cow position: chr7:6648868-6648487 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 81

Conread position: 333-699
Cow position: chr7:11446342-11446723 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 82

Conread position: 333-699
Cow position: chr7:11466948-11466570 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 68

Conread position: 333-699
Cow position: chr7:20799645-20799274 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 237
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 80

Conread position: 333-699
Cow position: chr7:25439316-25439674 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 234
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 131, 68

Conread position: 333-699
Cow position: chr7:41870141-41869778 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 6

Conread position: 333-703
Cow position: chr7:1449281-1449656 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 155

Conread position: 333-703
Cow position: chr7:34148896-34149270 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 242
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 58

Conread position: 333-703
Cow position: chr7:34485696-34486085 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 160

Conread position: 333-708
Cow position: chr7:67798638-67799027 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 255
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 66, 162

Conread position: 335-684
Cow position: chr7:8145449-8145091 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 78

Conread position: 335-694
Cow position: chr7:26025824-26026203 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 248
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 339-682
Cow position: chr7:58378403-58378059 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 205

Conread position: 371-682
Cow position: chr7:59136257-59136559 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 134

Conread position: 372-696
Cow position: chr7:62442922-62442578 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 28

Conread position: 373-527
Cow position: chr7:25686388-25686232 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 375-669
Cow position: chr7:54515286-54514983 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 45

Conread position: 375-699
Cow position: chr7:41489947-41490279 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 40

Conread position: 375-704
Cow position: chr7:3729808-3730153 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 38

Conread position: 379-684
Cow position: chr7:25101867-25102181 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 29

Conread position: 382-593
Cow position: chr7:7084560-7084337 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 386-714
Cow position: chr7:13537741-13537402 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 24

Conread position: 392-703
Cow position: chr7:1611360-1611039 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 8

Conread position: 392-715
Cow position: chr7:26925188-26924852 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 65, 16

Conread position: 395-699
Cow position: chr7:67423499-67423797 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 13

Conread position: 396-696
Cow position: chr7:68479018-68479333 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 100

Conread position: 411-699
Cow position: chr7:38536384-38536677 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 132

Conread position: 466-703
Cow position: chr7:68478384-68478614 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 129, 92

Conread position: 472-684
Cow position: chr7:27540420-27540211 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 84

Conread position: 472-699
Cow position: chr7:35297334-35297103 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 472-749
Cow position: chr7:20106352-20106076 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 16

Conread position: 484-681
Cow position: chr7:19048938-19048739 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 114, 22

Conread position: 495-699
Cow position: chr7:33074203-33073999 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 191, 91

Show alignments to all cow chromosomes.