Cow genome map

Conread name: Ss1.1-LyN1-MLN01G120009.5

Conread position: 5-319
Cow position: chr9:59509878-59510187 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 19

Conread position: 20-461
Cow position: chr9:54994586-54995038 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 21-175
Cow position: chr9:64158376-64158532 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 38

Conread position: 43-287
Cow position: chr9:29327352-29327590 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 78

Conread position: 51-336
Cow position: chr9:3725578-3725865 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 7

Conread position: 142-684
Cow position: chr9:23409632-23410197 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 106

Conread position: 157-703
Cow position: chr9:39992366-39992932 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 355
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 88

Conread position: 311-593
Cow position: chr9:3024715-3024995 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 143, 15

Conread position: 316-684
Cow position: chr9:3725890-3726270 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 10

Conread position: 318-684
Cow position: chr9:3155643-3156020 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 85, 278

Conread position: 327-563
Cow position: chr9:59510224-59510479 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 332-540
Cow position: chr9:18007183-18007401 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 93

Conread position: 332-642
Cow position: chr9:20310106-20309788 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 98

Conread position: 332-645
Cow position: chr9:8969298-8968969 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 122, 62

Conread position: 332-663
Cow position: chr9:3938166-3937833 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 211

Conread position: 332-684
Cow position: chr9:10321447-10321802 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 124

Conread position: 332-684
Cow position: chr9:25023676-25023309 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 77, 49

Conread position: 332-684
Cow position: chr9:64118454-64118817 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 168

Conread position: 332-698
Cow position: chr9:831807-831428 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 122, 164

Conread position: 332-699
Cow position: chr9:28626405-28626033 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 80, 136

Conread position: 332-718
Cow position: chr9:2052075-2052471 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 258
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 34

Conread position: 333-663
Cow position: chr9:6830917-6830586 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 120, 59

Conread position: 333-663
Cow position: chr9:7002180-7002524 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 82

Conread position: 333-676
Cow position: chr9:222920-222564 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 78

Conread position: 333-676
Cow position: chr9:27933720-27934079 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 82

Conread position: 333-681
Cow position: chr9:1996294-1995923 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 72, 214

Conread position: 333-681
Cow position: chr9:47001832-47002178 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 65

Conread position: 333-682
Cow position: chr9:30671996-30672358 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 66, 87

Conread position: 333-684
Cow position: chr9:2170684-2171051 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 13

Conread position: 333-684
Cow position: chr9:28021173-28021541 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 15

Conread position: 333-684
Cow position: chr9:29629121-29628754 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 207

Conread position: 333-684
Cow position: chr9:31807166-31807526 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 115, 77

Conread position: 333-684
Cow position: chr9:37163182-37162814 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 207

Conread position: 333-684
Cow position: chr9:42309309-42309675 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 206

Conread position: 333-684
Cow position: chr9:42568499-42568864 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 115, 79

Conread position: 333-684
Cow position: chr9:59455973-59455606 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 213

Conread position: 333-684
Cow position: chr9:59535725-59536087 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 33

Conread position: 333-684
Cow position: chr9:60278396-60278029 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 206

Conread position: 333-696
Cow position: chr9:781176-780798 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 248
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 333-696
Cow position: chr9:3548544-3548165 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 124, 79

Conread position: 333-696
Cow position: chr9:36724127-36724507 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 333-696
Cow position: chr9:46626173-46625794 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 66, 230

Conread position: 333-699
Cow position: chr9:4672233-4672615 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 230

Conread position: 333-699
Cow position: chr9:16267986-16268379 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 81

Conread position: 333-699
Cow position: chr9:25483499-25483881 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 66, 230

Conread position: 333-699
Cow position: chr9:31194541-31194159 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 196

Conread position: 333-699
Cow position: chr9:34242972-34242588 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 333-699
Cow position: chr9:45872980-45873356 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 33

Conread position: 333-703
Cow position: chr9:2199737-2200118 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 118, 6

Conread position: 333-703
Cow position: chr9:29028603-29028217 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 255
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 207

Conread position: 333-703
Cow position: chr9:37971581-37971199 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 81

Conread position: 333-706
Cow position: chr9:6051414-6051035 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 33

Conread position: 333-706
Cow position: chr9:28677600-28677987 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 348

Conread position: 333-707
Cow position: chr9:2185590-2185977 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 252
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 18

Conread position: 333-707
Cow position: chr9:59483043-59482655 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 63

Conread position: 339-699
Cow position: chr9:15072148-15072522 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 76

Conread position: 342-732
Cow position: chr9:29327958-29328340 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 39

Conread position: 347-697
Cow position: chr9:64158763-64159122 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 198

Conread position: 354-696
Cow position: chr9:792863-792508 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 42

Conread position: 354-699
Cow position: chr9:37129887-37129530 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 36

Conread position: 365-699
Cow position: chr9:37064134-37063789 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 40

Conread position: 369-696
Cow position: chr9:4984436-4984772 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 87

Conread position: 372-696
Cow position: chr9:9331059-9330719 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 124

Conread position: 374-696
Cow position: chr9:3542477-3542813 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 166

Conread position: 375-594
Cow position: chr9:11519135-11518915 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 161

Conread position: 375-659
Cow position: chr9:31020476-31020776 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 375-684
Cow position: chr9:6757241-6757566 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 46

Conread position: 385-703
Cow position: chr9:10315045-10315377 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 389-703
Cow position: chr9:7062409-7062081 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 149

Conread position: 462-703
Cow position: chr9:30826448-30826695 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 55

Conread position: 474-699
Cow position: chr9:50789456-50789684 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 43

Conread position: 495-714
Cow position: chr9:2001603-2001388 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 68

Conread position: 507-684
Cow position: chr9:4280268-4280449 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 507-696
Cow position: chr9:35317766-35317571 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 34

Conread position: 552-700
Cow position: chr9:59510649-59510801 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 561-713
Cow position: chr9:3394119-3393965 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 147

Show alignments to all cow chromosomes.