Cow genome map
Conread name: | Ss1.1-LyN1-MLN01G120009.5 |
Conread position: | 5-319 |
Cow position: | chr9:59509878-59510187 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 19 |
Conread position: | 20-461 |
Cow position: | chr9:54994586-54995038 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 39 |
Conread position: | 21-175 |
Cow position: | chr9:64158376-64158532 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 22, 38 |
Conread position: | 43-287 |
Cow position: | chr9:29327352-29327590 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 124, 78 |
Conread position: | 51-336 |
Cow position: | chr9:3725578-3725865 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 201 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 134, 7 |
Conread position: | 142-684 |
Cow position: | chr9:23409632-23410197 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 106 |
Conread position: | 157-703 |
Cow position: | chr9:39992366-39992932 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 355 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 38, 88 |
Conread position: | 311-593 |
Cow position: | chr9:3024715-3024995 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 194 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 143, 15 |
Conread position: | 316-684 |
Cow position: | chr9:3725890-3726270 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 10 |
Conread position: | 318-684 |
Cow position: | chr9:3155643-3156020 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 258 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 85, 278 |
Conread position: | 327-563 |
Cow position: | chr9:59510224-59510479 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 332-540 |
Cow position: | chr9:18007183-18007401 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 55, 93 |
Conread position: | 332-642 |
Cow position: | chr9:20310106-20309788 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 211 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 69, 98 |
Conread position: | 332-645 |
Cow position: | chr9:8969298-8968969 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 221 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 122, 62 |
Conread position: | 332-663 |
Cow position: | chr9:3938166-3937833 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 239 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 71, 211 |
Conread position: | 332-684 |
Cow position: | chr9:10321447-10321802 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 240 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 78, 124 |
Conread position: | 332-684 |
Cow position: | chr9:25023676-25023309 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 247 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 77, 49 |
Conread position: | 332-684 |
Cow position: | chr9:64118454-64118817 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 250 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 73, 168 |
Conread position: | 332-698 |
Cow position: | chr9:831807-831428 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 255 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 122, 164 |
Conread position: | 332-699 |
Cow position: | chr9:28626405-28626033 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 247 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 80, 136 |
Conread position: | 332-718 |
Cow position: | chr9:2052075-2052471 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 258 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 42, 34 |
Conread position: | 333-663 |
Cow position: | chr9:6830917-6830586 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 217 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 120, 59 |
Conread position: | 333-663 |
Cow position: | chr9:7002180-7002524 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 235 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 66, 82 |
Conread position: | 333-676 |
Cow position: | chr9:222920-222564 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 226 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 118, 78 |
Conread position: | 333-676 |
Cow position: | chr9:27933720-27934079 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 240 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 66, 82 |
Conread position: | 333-681 |
Cow position: | chr9:1996294-1995923 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 249 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 72, 214 |
Conread position: | 333-681 |
Cow position: | chr9:47001832-47002178 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 237 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 74, 65 |
Conread position: | 333-682 |
Cow position: | chr9:30671996-30672358 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 248 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 66, 87 |
Conread position: | 333-684 |
Cow position: | chr9:2170684-2171051 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 239 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 63, 13 |
Conread position: | 333-684 |
Cow position: | chr9:28021173-28021541 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 249 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 66, 15 |
Conread position: | 333-684 |
Cow position: | chr9:29629121-29628754 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 251 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 66, 207 |
Conread position: | 333-684 |
Cow position: | chr9:31807166-31807526 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 246 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 115, 77 |
Conread position: | 333-684 |
Cow position: | chr9:37163182-37162814 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 244 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 77, 207 |
Conread position: | 333-684 |
Cow position: | chr9:42309309-42309675 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 251 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 77, 206 |
Conread position: | 333-684 |
Cow position: | chr9:42568499-42568864 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 251 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 115, 79 |
Conread position: | 333-684 |
Cow position: | chr9:59455973-59455606 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 244 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 66, 213 |
Conread position: | 333-684 |
Cow position: | chr9:59535725-59536087 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 246 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 76, 33 |
Conread position: | 333-684 |
Cow position: | chr9:60278396-60278029 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 248 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 66, 206 |
Conread position: | 333-696 |
Cow position: | chr9:781176-780798 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 248 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 333-696 |
Cow position: | chr9:3548544-3548165 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 253 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 124, 79 |
Conread position: | 333-696 |
Cow position: | chr9:36724127-36724507 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 244 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 333-696 |
Cow position: | chr9:46626173-46625794 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 255 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 66, 230 |
Conread position: | 333-699 |
Cow position: | chr9:4672233-4672615 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 251 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 66, 230 |
Conread position: | 333-699 |
Cow position: | chr9:16267986-16268379 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 263 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 65, 81 |
Conread position: | 333-699 |
Cow position: | chr9:25483499-25483881 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 256 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 66, 230 |
Conread position: | 333-699 |
Cow position: | chr9:31194541-31194159 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 249 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 66, 196 |
Conread position: | 333-699 |
Cow position: | chr9:34242972-34242588 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 249 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 333-699 |
Cow position: | chr9:45872980-45873356 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 256 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 50, 33 |
Conread position: | 333-703 |
Cow position: | chr9:2199737-2200118 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 246 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 118, 6 |
Conread position: | 333-703 |
Cow position: | chr9:29028603-29028217 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 255 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 66, 207 |
Conread position: | 333-703 |
Cow position: | chr9:37971581-37971199 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 260 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 66, 81 |
Conread position: | 333-706 |
Cow position: | chr9:6051414-6051035 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 255 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 118, 33 |
Conread position: | 333-706 |
Cow position: | chr9:28677600-28677987 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 249 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 66, 348 |
Conread position: | 333-707 |
Cow position: | chr9:2185590-2185977 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 252 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 120, 18 |
Conread position: | 333-707 |
Cow position: | chr9:59483043-59482655 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 256 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 118, 63 |
Conread position: | 339-699 |
Cow position: | chr9:15072148-15072522 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 252 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 64, 76 |
Conread position: | 342-732 |
Cow position: | chr9:29327958-29328340 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 276 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 123, 39 |
Conread position: | 347-697 |
Cow position: | chr9:64158763-64159122 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 198 |
Conread position: | 354-696 |
Cow position: | chr9:792863-792508 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 237 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 49, 42 |
Conread position: | 354-699 |
Cow position: | chr9:37129887-37129530 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 252 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 58, 36 |
Conread position: | 365-699 |
Cow position: | chr9:37064134-37063789 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 240 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 89, 40 |
Conread position: | 369-696 |
Cow position: | chr9:4984436-4984772 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 224 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 23, 87 |
Conread position: | 372-696 |
Cow position: | chr9:9331059-9330719 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 228 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 84, 124 |
Conread position: | 374-696 |
Cow position: | chr9:3542477-3542813 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 232 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 25, 166 |
Conread position: | 375-594 |
Cow position: | chr9:11519135-11518915 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 164 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 82, 161 |
Conread position: | 375-659 |
Cow position: | chr9:31020476-31020776 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 199 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 375-684 |
Cow position: | chr9:6757241-6757566 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 218 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 28, 46 |
Conread position: | 385-703 |
Cow position: | chr9:10315045-10315377 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 219 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 389-703 |
Cow position: | chr9:7062409-7062081 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 216 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 64, 149 |
Conread position: | 462-703 |
Cow position: | chr9:30826448-30826695 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 168 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 47, 55 |
Conread position: | 474-699 |
Cow position: | chr9:50789456-50789684 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 154 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 36, 43 |
Conread position: | 495-714 |
Cow position: | chr9:2001603-2001388 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 106, 68 |
Conread position: | 507-684 |
Cow position: | chr9:4280268-4280449 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 507-696 |
Cow position: | chr9:35317766-35317571 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 39, 34 |
Conread position: | 552-700 |
Cow position: | chr9:59510649-59510801 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 561-713 |
Cow position: | chr9:3394119-3393965 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 121 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 30, 147 |
Show alignments to all cow chromosomes.