Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120024.5 |
| Conread position: | 376-789 |
| Cow position: | chr10:8996414-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 383-908 |
| Cow position: | chr10:21939141-21938620 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 329 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 389-781 |
| Cow position: | chr10:9031273-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 390-940 |
| Cow position: | chr10:8996567-8996018 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 399-967 |
| Cow position: | chr10:8996727-8996159 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 417-850 |
| Cow position: | chr10:9010268-9009836 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 424-812 |
| Cow position: | chr10:9031224-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 432-972 |
| Cow position: | chr10:9010505-9009966 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 5 |
| Conread position: | 441-970 |
| Cow position: | chr10:8996769-8996240 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-907 |
| Cow position: | chr10:9010328-9009863 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-886 |
| Cow position: | chr10:9031176-9031601 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-961 |
| Cow position: | chr10:8996580-8996081 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-972 |
| Cow position: | chr10:9010391-9009882 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 472-945 |
| Cow position: | chr10:21939222-21938749 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-946 |
| Cow position: | chr10:21939350-21938916 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 287 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 501-686 |
| Cow position: | chr10:9010017-9009832 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 501-955 |
| Cow position: | chr10:9010521-9010069 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 337 |
| Conread position: | 511-961 |
| Cow position: | chr10:8996867-8996417 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-960 |
| Cow position: | chr10:9010592-9010147 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 519-961 |
| Cow position: | chr10:8996775-8996334 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 0 |
| Conread position: | 520-938 |
| Cow position: | chr10:21939090-21938674 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 53 |
| Conread position: | 550-960 |
| Cow position: | chr10:21939228-21938819 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 387, 391 |
| Conread position: | 555-773 |
| Cow position: | chr10:9031671-9031890 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 595-967 |
| Cow position: | chr10:8996867-8996495 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 597-971 |
| Cow position: | chr10:9031228-9031602 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 632-857 |
| Cow position: | chr10:9031664-9031890 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 651-970 |
| Cow position: | chr10:8996895-8996576 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 235, 242 |
| Conread position: | 700-972 |
| Cow position: | chr10:9010574-9010302 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 716-941 |
| Cow position: | chr10:9031664-9031890 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 118, 107 |
Show alignments to all cow chromosomes.