Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120024.5 |
| Conread position: | 377-955 |
| Cow position: | |
| Alignm length: | 584 |
| Alignm identity: | 354 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 380-971 |
| Cow position: | |
| Alignm length: | 596 |
| Alignm identity: | 370 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 384-960 |
| Cow position: | |
| Alignm length: | 578 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 389-694 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 389-789 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 389-793 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 389-863 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 389-872 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 389-872 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 389-945 |
| Cow position: | |
| Alignm length: | 560 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 389-946 |
| Cow position: | |
| Alignm length: | 560 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 389-955 |
| Cow position: | |
| Alignm length: | 568 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 389-961 |
| Cow position: | |
| Alignm length: | 574 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 8 |
| Conread position: | 390-972 |
| Cow position: | |
| Alignm length: | 583 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 391-967 |
| Cow position: | |
| Alignm length: | 578 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 399-874 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 259 |
| Conread position: | 399-961 |
| Cow position: | |
| Alignm length: | 563 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 558, 0 |
| Conread position: | 399-962 |
| Cow position: | |
| Alignm length: | 566 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 399-970 |
| Cow position: | |
| Alignm length: | 573 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 411-685 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 412-947 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 417-955 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 25 |
| Conread position: | 426-914 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 87 |
| Conread position: | 431-875 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 6 |
| Conread position: | 432-800 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 148, 5 |
| Conread position: | 432-947 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 432-955 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 492 |
| Conread position: | 434-961 |
| Cow position: | |
| Alignm length: | 529 |
| Alignm identity: | 324 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 162, 140 |
| Conread position: | 437-961 |
| Cow position: | |
| Alignm length: | 527 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 232 |
| Conread position: | 438-946 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 494, 489 |
| Conread position: | 441-875 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 267, 0 |
| Conread position: | 441-947 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-955 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-961 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 325 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 441-961 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 300 |
| Conread position: | 441-961 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 441-961 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 238 |
| Conread position: | 442-909 |
| Cow position: | |
| Alignm length: | 468 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-940 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 216 |
| Conread position: | 442-961 |
| Cow position: | |
| Alignm length: | 520 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-967 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 444-947 |
| Cow position: | |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 451-955 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-961 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 0 |
| Conread position: | 457-907 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 457-972 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 156 |
| Conread position: | 461-807 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 462-821 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 233, 73 |
| Conread position: | 462-905 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 111 |
| Conread position: | 462-906 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-947 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-960 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 462-960 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 111 |
| Conread position: | 462-960 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 362 |
| Conread position: | 462-961 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-961 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 0 |
| Conread position: | 462-972 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 224 |
| Conread position: | 463-874 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 463-947 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 463-955 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-795 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 467-947 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 198 |
| Conread position: | 467-961 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 457 |
| Conread position: | 468-872 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 468-960 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 134 |
| Conread position: | 469-960 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 361 |
| Conread position: | 469-961 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-905 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 164 |
| Conread position: | 501-905 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 45 |
| Conread position: | 501-927 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 359 |
| Conread position: | 506-972 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-947 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 417 |
| Conread position: | 510-961 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 422, 85 |
| Conread position: | 511-907 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 515-947 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 356, 137 |
| Conread position: | 519-907 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 222 |
| Conread position: | 519-947 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 309 |
| Conread position: | 522-970 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 218, 102 |
| Conread position: | 523-961 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 140 |
| Conread position: | 523-961 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 328 |
| Conread position: | 523-961 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 145, 156 |
| Conread position: | 531-905 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-955 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 103, 59 |
| Conread position: | 598-960 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 236, 183 |
| Conread position: | 602-973 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 317, 134 |
| Conread position: | 603-967 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 316, 320 |
| Conread position: | 612-955 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 615-960 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 308, 301 |
| Conread position: | 679-967 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 696-957 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 124, 133 |
| Conread position: | 697-971 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 224, 212 |
Show alignments to all cow chromosomes.