Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120024.5 |
| Conread position: | 353-714 |
| Cow position: | chr21:12659668-12660024 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 353-960 |
| Cow position: | chr21:12659248-12659848 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 384-961 |
| Cow position: | chr21:12608740-12608164 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 385-967 |
| Cow position: | chr21:12659021-12659604 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 123 |
| Conread position: | 389-790 |
| Cow position: | chr21:34222941-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 389-853 |
| Cow position: | chr21:12608399-12607936 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 389-906 |
| Cow position: | chr21:12608903-12608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 390-872 |
| Cow position: | chr21:34223024-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 390-961 |
| Cow position: | chr21:12608818-12608249 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 390-972 |
| Cow position: | chr21:12658860-12659441 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 7 |
| Conread position: | 391-945 |
| Cow position: | chr21:12659448-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 47 |
| Conread position: | 391-967 |
| Cow position: | chr21:12658944-12659520 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 391-967 |
| Cow position: | chr21:12659112-12659688 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 177 |
| Conread position: | 391-967 |
| Cow position: | chr21:12659196-12659772 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 430 |
| Conread position: | 396-798 |
| Cow position: | chr21:12659621-12660024 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 400, 0 |
| Conread position: | 396-906 |
| Cow position: | chr21:12608477-12607967 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 396-961 |
| Cow position: | chr21:12608561-12607996 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 396-967 |
| Cow position: | chr21:12659369-12659940 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 397-879 |
| Cow position: | chr21:12659538-12660020 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-961 |
| Cow position: | chr21:12608612-12608080 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 9 |
| Conread position: | 444-967 |
| Cow position: | chr21:12658829-12659352 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 388 |
| Conread position: | 462-955 |
| Cow position: | chr21:34223037-34222544 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 136 |
| Conread position: | 469-967 |
| Cow position: | chr21:12608908-12608410 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 352 |
| Conread position: | 529-967 |
| Cow position: | chr21:34223135-34222700 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 529-970 |
| Cow position: | chr21:12658830-12659271 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 292 |
| Conread position: | 532-967 |
| Cow position: | chr21:34223051-34222616 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 598-960 |
| Cow position: | chr21:12658815-12659176 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 223 |
| Conread position: | 670-960 |
| Cow position: | chr21:12658803-12659092 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 144, 151 |
Show alignments to all cow chromosomes.