Cow genome map

Conread name: Ss1.1-LyN1-MLN01G120024.5

Conread position: 376-961
Cow position:
Alignm length: 587
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 383-912
Cow position:
Alignm length: 535
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 383-947
Cow position:
Alignm length: 567
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 368

Conread position: 383-967
Cow position:
Alignm length: 589
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 293

Conread position: 389-884
Cow position:
Alignm length: 496
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 389-907
Cow position:
Alignm length: 519
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 389-940
Cow position:
Alignm length: 556
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 10

Conread position: 389-944
Cow position:
Alignm length: 561
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 10

Conread position: 389-945
Cow position:
Alignm length: 560
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 389-945
Cow position:
Alignm length: 561
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 10

Conread position: 389-947
Cow position:
Alignm length: 560
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 10

Conread position: 389-959
Cow position:
Alignm length: 573
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 14

Conread position: 389-960
Cow position:
Alignm length: 574
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 390-947
Cow position:
Alignm length: 560
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 7

Conread position: 391-626
Cow position:
Alignm length: 239
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 44

Conread position: 399-907
Cow position:
Alignm length: 516
Alignm identity: 326
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 18

Conread position: 399-955
Cow position:
Alignm length: 560
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 399-961
Cow position:
Alignm length: 563
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 0

Conread position: 400-947
Cow position:
Alignm length: 550
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 49

Conread position: 411-955
Cow position:
Alignm length: 548
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 413-955
Cow position:
Alignm length: 543
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 415-907
Cow position:
Alignm length: 496
Alignm identity: 312
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 274, 22

Conread position: 417-947
Cow position:
Alignm length: 533
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 25

Conread position: 426-961
Cow position:
Alignm length: 538
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 429-947
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 432-967
Cow position:
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 147

Conread position: 434-946
Cow position:
Alignm length: 514
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 248

Conread position: 434-960
Cow position:
Alignm length: 530
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 149

Conread position: 434-971
Cow position:
Alignm length: 543
Alignm identity: 320
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 30

Conread position: 438-665
Cow position:
Alignm length: 228
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 438-708
Cow position:
Alignm length: 273
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 62

Conread position: 438-788
Cow position:
Alignm length: 354
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 71, 62

Conread position: 438-946
Cow position:
Alignm length: 509
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 438-955
Cow position:
Alignm length: 518
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 438-960
Cow position:
Alignm length: 523
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 519, 0

Conread position: 438-961
Cow position:
Alignm length: 524
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 519, 0

Conread position: 438-961
Cow position:
Alignm length: 524
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 438-971
Cow position:
Alignm length: 536
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 441-705
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 139, 144

Conread position: 441-789
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 146, 134

Conread position: 441-793
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 441-793
Cow position:
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 441-853
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 98

Conread position: 441-870
Cow position:
Alignm length: 430
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 441-906
Cow position:
Alignm length: 473
Alignm identity: 296
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 54

Conread position: 441-907
Cow position:
Alignm length: 474
Alignm identity: 285
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 49

Conread position: 442-693
Cow position:
Alignm length: 252
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 445-793
Cow position:
Alignm length: 354
Alignm identity: 222
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 45

Conread position: 445-905
Cow position:
Alignm length: 468
Alignm identity: 298
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 44

Conread position: 450-961
Cow position:
Alignm length: 516
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 106

Conread position: 451-816
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 217

Conread position: 451-947
Cow position:
Alignm length: 499
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 211

Conread position: 451-958
Cow position:
Alignm length: 513
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 126

Conread position: 451-967
Cow position:
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 126

Conread position: 451-967
Cow position:
Alignm length: 517
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 455-960
Cow position:
Alignm length: 508
Alignm identity: 305
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 312, 316

Conread position: 458-961
Cow position:
Alignm length: 504
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 461-961
Cow position:
Alignm length: 501
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 0

Conread position: 462-874
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 366

Conread position: 462-947
Cow position:
Alignm length: 487
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 462-947
Cow position:
Alignm length: 487
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 462-960
Cow position:
Alignm length: 501
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 462-961
Cow position:
Alignm length: 502
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 288

Conread position: 462-967
Cow position:
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 462-971
Cow position:
Alignm length: 513
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 165

Conread position: 462-972
Cow position:
Alignm length: 529
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 478

Conread position: 462-976
Cow position:
Alignm length: 516
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 493

Conread position: 463-907
Cow position:
Alignm length: 447
Alignm identity: 278
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 301, 276

Conread position: 463-947
Cow position:
Alignm length: 485
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 463-955
Cow position:
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 463-961
Cow position:
Alignm length: 499
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 494, 0

Conread position: 467-955
Cow position:
Alignm length: 489
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 467-961
Cow position:
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 467-967
Cow position:
Alignm length: 505
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 468-960
Cow position:
Alignm length: 496
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 194

Conread position: 468-961
Cow position:
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 489, 0

Conread position: 468-971
Cow position:
Alignm length: 505
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 448

Conread position: 468-972
Cow position:
Alignm length: 507
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 448

Conread position: 470-907
Cow position:
Alignm length: 441
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 113

Conread position: 470-961
Cow position:
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 456

Conread position: 470-979
Cow position:
Alignm length: 511
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 487

Conread position: 471-961
Cow position:
Alignm length: 495
Alignm identity: 312
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 80, 84

Conread position: 472-817
Cow position:
Alignm length: 349
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 16

Conread position: 472-955
Cow position:
Alignm length: 487
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 215, 210

Conread position: 472-955
Cow position:
Alignm length: 488
Alignm identity: 305
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 133, 126

Conread position: 486-970
Cow position:
Alignm length: 503
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 488

Conread position: 492-967
Cow position:
Alignm length: 480
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 133

Conread position: 498-961
Cow position:
Alignm length: 464
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 0

Conread position: 501-961
Cow position:
Alignm length: 462
Alignm identity: 270
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 182, 186

Conread position: 511-792
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 74

Conread position: 511-821
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 169, 157

Conread position: 511-907
Cow position:
Alignm length: 399
Alignm identity: 253
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 327, 312

Conread position: 512-946
Cow position:
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 519-961
Cow position:
Alignm length: 446
Alignm identity: 266
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 410

Conread position: 520-823
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 244, 232

Conread position: 520-905
Cow position:
Alignm length: 388
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 227, 222

Conread position: 520-961
Cow position:
Alignm length: 442
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 523-906
Cow position:
Alignm length: 387
Alignm identity: 245
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 80

Conread position: 523-907
Cow position:
Alignm length: 387
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 157

Conread position: 525-907
Cow position:
Alignm length: 385
Alignm identity: 244
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 50, 56

Conread position: 529-913
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 529-961
Cow position:
Alignm length: 433
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 0

Conread position: 529-967
Cow position:
Alignm length: 439
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 531-695
Cow position:
Alignm length: 165
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 533-957
Cow position:
Alignm length: 431
Alignm identity: 282
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 126, 132

Conread position: 540-906
Cow position:
Alignm length: 370
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 540-960
Cow position:
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 0

Conread position: 541-960
Cow position:
Alignm length: 421
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 388

Conread position: 554-955
Cow position:
Alignm length: 404
Alignm identity: 242
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 311, 113

Conread position: 596-960
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 604-960
Cow position:
Alignm length: 359
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 234, 225

Conread position: 626-961
Cow position:
Alignm length: 337
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 305, 301

Conread position: 663-955
Cow position:
Alignm length: 294
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 174, 165

Conread position: 679-944
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 158, 149

Conread position: 679-947
Cow position:
Alignm length: 270
Alignm identity: 172
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 218, 234

Conread position: 680-961
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 702-967
Cow position:
Alignm length: 266
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 709-965
Cow position:
Alignm length: 259
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 54

Conread position: 754-971
Cow position:
Alignm length: 218
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 754-971
Cow position:
Alignm length: 218
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.