Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120024.5 |
| Conread position: | 377-821 |
| Cow position: | chr24:17077912-17077469 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 389-693 |
| Cow position: | chr24:17013190-17013493 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 389-948 |
| Cow position: | chr24:17035680-17035122 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 389-961 |
| Cow position: | chr24:17036352-17035782 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 389-961 |
| Cow position: | chr24:17078151-17077581 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 389-961 |
| Cow position: | chr24:17078235-17077665 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 10 |
| Conread position: | 390-947 |
| Cow position: | chr24:17078066-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 397-801 |
| Cow position: | chr24:17035337-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 397-961 |
| Cow position: | chr24:17036009-17035445 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 397-961 |
| Cow position: | chr24:17036429-17035865 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-961 |
| Cow position: | chr24:17070408-17070971 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 397-967 |
| Cow position: | chr24:17036261-17035691 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 399-796 |
| Cow position: | chr24:17070662-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 399-868 |
| Cow position: | chr24:17070578-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 399-955 |
| Cow position: | chr24:17036091-17035535 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 423-967 |
| Cow position: | chr24:17078285-17077742 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 19 |
| Conread position: | 431-961 |
| Cow position: | chr24:17036142-17035613 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 11 |
| Conread position: | 433-955 |
| Cow position: | chr24:17036560-17036039 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 15 |
| Conread position: | 441-947 |
| Cow position: | chr24:17035797-17035291 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-947 |
| Cow position: | chr24:17035881-17035375 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-960 |
| Cow position: | chr24:17035545-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 457-665 |
| Cow position: | chr24:16986439-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 117 |
| Conread position: | 457-955 |
| Cow position: | chr24:17036618-17036123 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 462-947 |
| Cow position: | chr24:17070557-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-955 |
| Cow position: | chr24:17070389-17070882 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 416 |
| Conread position: | 463-885 |
| Cow position: | chr24:17035439-17035017 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-955 |
| Cow position: | chr24:17035691-17035199 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-961 |
| Cow position: | chr24:17036433-17035949 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 519-872 |
| Cow position: | chr24:17013152-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 519-961 |
| Cow position: | chr24:17070362-17070804 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 553-760 |
| Cow position: | chr24:16986451-16986658 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 92 |
| Conread position: | 603-946 |
| Cow position: | chr24:17013152-17013494 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 614-841 |
| Cow position: | chr24:16986428-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 617-961 |
| Cow position: | chr24:17036627-17036285 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 687-947 |
| Cow position: | chr24:17013152-17013411 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 715-917 |
| Cow position: | chr24:16986445-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 171, 178 |
Show alignments to all cow chromosomes.