Cow genome map
Conread name: | Ss1.1-LyN1-MLN01G120024.5 |
Conread position: | 376-955 |
Cow position: | chr7:3180045-3180624 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 67 |
Conread position: | 380-955 |
Cow position: | chr7:1014457-1015026 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 20 |
Conread position: | 389-783 |
Cow position: | chr7:11600825-11600432 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 242 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 389-843 |
Cow position: | chr7:18390356-18390809 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 10 |
Conread position: | 390-968 |
Cow position: | chr7:3180312-3180887 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 9 |
Conread position: | 391-954 |
Cow position: | chr7:28846450-28847013 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 54 |
Conread position: | 399-905 |
Cow position: | chr7:11601068-11600562 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 50 |
Conread position: | 399-961 |
Cow position: | chr7:1014806-1015368 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 44 |
Conread position: | 399-964 |
Cow position: | chr7:12293299-12293864 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 338 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 24, 39 |
Conread position: | 399-971 |
Cow position: | chr7:11601152-11600580 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 44 |
Conread position: | 400-878 |
Cow position: | chr7:1014724-1015201 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 9 |
Conread position: | 400-961 |
Cow position: | chr7:3179817-3180378 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 37 |
Conread position: | 429-821 |
Cow position: | chr7:8325302-8325694 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 258 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 82, 60 |
Conread position: | 431-823 |
Cow position: | chr7:8277412-8277803 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 240 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 160, 11 |
Conread position: | 431-907 |
Cow position: | chr7:8325641-8326116 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 298 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 163, 6 |
Conread position: | 431-907 |
Cow position: | chr7:11434748-11434280 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 308 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 165, 6 |
Conread position: | 435-961 |
Cow position: | chr7:42878869-42878343 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 438-977 |
Cow position: | chr7:12293422-12293962 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 318 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 498, 502 |
Conread position: | 441-821 |
Cow position: | chr7:8243212-8243592 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 238 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 155, 134 |
Conread position: | 441-907 |
Cow position: | chr7:8277925-8278391 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 306 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 61, 41 |
Conread position: | 441-963 |
Cow position: | chr7:28846584-28847106 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 309 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 307, 300 |
Conread position: | 442-789 |
Cow position: | chr7:42878610-42878263 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 227 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-907 |
Cow position: | chr7:3180027-3180492 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 133 |
Conread position: | 442-944 |
Cow position: | chr7:42878778-42878276 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 316 |
Conread position: | 451-821 |
Cow position: | chr7:1438336-1438706 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 230 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 451-821 |
Cow position: | chr7:8324820-8325190 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 257 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 53, 46 |
Conread position: | 451-829 |
Cow position: | chr7:1015109-1015490 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 249 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 8, 127 |
Conread position: | 451-955 |
Cow position: | chr7:1014690-1015194 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 300 |
Conread position: | 451-955 |
Cow position: | chr7:3179700-3180204 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 212 |
Conread position: | 452-821 |
Cow position: | chr7:8243390-8243759 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 244 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 50, 37 |
Conread position: | 455-955 |
Cow position: | chr7:3179956-3180456 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 456-961 |
Cow position: | chr7:1014281-1014779 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 307 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 223, 208 |
Conread position: | 458-823 |
Cow position: | chr7:8243061-8243425 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 229 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 117, 121 |
Conread position: | 458-955 |
Cow position: | chr7:1439480-1439977 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 314 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 214, 108 |
Conread position: | 462-841 |
Cow position: | chr7:1015037-1015416 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 134 |
Conread position: | 462-860 |
Cow position: | chr7:11600837-11600439 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 32 |
Conread position: | 462-907 |
Cow position: | chr7:8277358-8277803 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 278 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 50, 39 |
Conread position: | 462-907 |
Cow position: | chr7:8277778-8278223 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 285 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 126, 111 |
Conread position: | 462-920 |
Cow position: | chr7:18390344-18390803 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 456, 0 |
Conread position: | 462-955 |
Cow position: | chr7:3179795-3180288 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 116 |
Conread position: | 462-957 |
Cow position: | chr7:1439739-1440231 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 301 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 50, 21 |
Conread position: | 462-961 |
Cow position: | chr7:1014371-1014863 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 308 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 279, 0 |
Conread position: | 462-967 |
Cow position: | chr7:1439650-1440157 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 315 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 39, 119 |
Conread position: | 462-967 |
Cow position: | chr7:11601173-11600668 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 40 |
Conread position: | 463-932 |
Cow position: | chr7:28846438-28846907 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 284 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 463-955 |
Cow position: | chr7:42879177-42878685 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 39 |
Conread position: | 467-946 |
Cow position: | chr7:1014958-1015437 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 297 |
Conread position: | 468-947 |
Cow position: | chr7:42879004-42878525 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 468-955 |
Cow position: | chr7:42879424-42878937 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 77 |
Conread position: | 468-961 |
Cow position: | chr7:42879088-42878595 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 469-947 |
Cow position: | chr7:3180306-3180784 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 195 |
Conread position: | 469-955 |
Cow position: | chr7:42878919-42878433 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 189 |
Conread position: | 469-961 |
Cow position: | chr7:18390267-18390759 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 470-905 |
Cow position: | chr7:8278122-8278555 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 274 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 125, 111 |
Conread position: | 471-961 |
Cow position: | chr7:42879253-42878763 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 472-960 |
Cow position: | chr7:18390186-18390673 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 485, 0 |
Conread position: | 478-908 |
Cow position: | chr7:1014218-1014649 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 277 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 5, 417 |
Conread position: | 493-944 |
Cow position: | chr7:11600890-11600439 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 494-961 |
Cow position: | chr7:1014650-1015116 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 7 |
Conread position: | 496-960 |
Cow position: | chr7:3180249-3180712 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 459, 0 |
Conread position: | 497-967 |
Cow position: | chr7:42879312-42878841 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 501-967 |
Cow position: | chr7:18390047-18390513 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 87 |
Conread position: | 511-824 |
Cow position: | chr7:8325804-8326117 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 217 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 158, 169 |
Conread position: | 511-878 |
Cow position: | chr7:1438312-1438679 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 223 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 319, 312 |
Conread position: | 511-906 |
Cow position: | chr7:8243617-8244010 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 243 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 77, 65 |
Conread position: | 511-907 |
Cow position: | chr7:8277575-8277971 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 257 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 85, 69 |
Conread position: | 511-907 |
Cow position: | chr7:8324964-8325360 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 245 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 85, 64 |
Conread position: | 511-961 |
Cow position: | chr7:8277911-8278361 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 286 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 92, 74 |
Conread position: | 511-967 |
Cow position: | chr7:18390141-18390597 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 523-823 |
Cow position: | chr7:8325312-8325612 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 205 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 53, 66 |
Conread position: | 523-899 |
Cow position: | chr7:8243210-8243585 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 240 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 59, 52 |
Conread position: | 523-905 |
Cow position: | chr7:1439882-1440263 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 243 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 67, 73 |
Conread position: | 523-907 |
Cow position: | chr7:8325144-8325528 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 248 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 78, 52 |
Conread position: | 524-802 |
Cow position: | chr7:11434824-11434546 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 190 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 52, 65 |
Conread position: | 528-824 |
Cow position: | chr7:8277256-8277552 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 197 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 62, 44 |
Conread position: | 528-907 |
Cow position: | chr7:8324729-8325108 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 256 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 82, 47 |
Conread position: | 529-961 |
Cow position: | chr7:11601190-11600759 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 428, 0 |
Conread position: | 533-960 |
Cow position: | chr7:18389995-18390421 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 270 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 422, 0 |
Conread position: | 552-956 |
Cow position: | chr7:12293284-12293688 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 247 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 597-822 |
Cow position: | chr7:1439451-1439674 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 151 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 599-955 |
Cow position: | chr7:11601204-11600848 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 66, 59 |
Conread position: | 603-974 |
Cow position: | chr7:1014260-1014631 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 234 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 76, 64 |
Conread position: | 607-961 |
Cow position: | chr7:28846498-28846852 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 214 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 207, 223 |
Conread position: | 679-961 |
Cow position: | chr7:3179676-3179958 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 190 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 242, 236 |
Conread position: | 681-957 |
Cow position: | chr7:1439451-1439728 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 183 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 205, 151 |
Conread position: | 683-961 |
Cow position: | chr7:11601204-11600926 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 180 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.