Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01G120024.5 |
| Conread position: | 377-947 |
| Cow position: | chr8:48406945-48406375 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 380-917 |
| Cow position: | chr8:55581090-55581627 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 8 |
| Conread position: | 389-870 |
| Cow position: | chr8:55581268-55581748 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 389-907 |
| Cow position: | chr8:45201380-45201897 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 389-955 |
| Cow position: | chr8:46816659-46817224 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 389-957 |
| Cow position: | chr8:46816407-46816974 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 10 |
| Conread position: | 389-961 |
| Cow position: | chr8:46816323-46816894 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 389-961 |
| Cow position: | chr8:48407100-48406529 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 389-961 |
| Cow position: | chr8:55580932-55581502 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 533, 10 |
| Conread position: | 389-971 |
| Cow position: | chr8:46816155-46816736 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 391-722 |
| Cow position: | chr8:45201633-45201964 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 391-960 |
| Cow position: | chr8:48407435-48406866 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 399-907 |
| Cow position: | chr8:55581193-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 400-961 |
| Cow position: | chr8:55581026-55581587 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 410-789 |
| Cow position: | chr8:48406658-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 336, 7 |
| Conread position: | 412-957 |
| Cow position: | chr8:46816009-46816554 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 411 |
| Conread position: | 417-942 |
| Cow position: | chr8:46816857-46817378 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 429-961 |
| Cow position: | chr8:45201336-45201867 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 432-961 |
| Cow position: | chr8:45201087-45201615 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 441-841 |
| Cow position: | chr8:45201515-45201915 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-947 |
| Cow position: | chr8:46816794-46817300 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 441-955 |
| Cow position: | chr8:48407301-48406787 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 382 |
| Conread position: | 441-967 |
| Cow position: | chr8:55580899-55581425 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-816 |
| Cow position: | chr8:6958002-6957629 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 155, 149 |
| Conread position: | 451-860 |
| Cow position: | chr8:48406703-48406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 352 |
| Conread position: | 451-970 |
| Cow position: | chr8:48407460-48406940 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 455-961 |
| Cow position: | chr8:48407119-48406613 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 365 |
| Conread position: | 457-960 |
| Cow position: | chr8:48407621-48407118 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-955 |
| Cow position: | chr8:46816563-46817056 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 215 |
| Conread position: | 462-955 |
| Cow position: | chr8:48407532-48407039 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 191 |
| Conread position: | 462-961 |
| Cow position: | chr8:45201032-45201531 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-961 |
| Cow position: | chr8:45201200-45201699 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-961 |
| Cow position: | chr8:45201284-45201783 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-961 |
| Cow position: | chr8:46816648-46817146 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 313 |
| Conread position: | 467-960 |
| Cow position: | chr8:45200953-45201445 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 468-944 |
| Cow position: | chr8:46816149-46816625 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 157 |
| Conread position: | 468-961 |
| Cow position: | chr8:45200786-45201279 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 305 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 128, 115 |
| Conread position: | 468-961 |
| Cow position: | chr8:46815981-46816474 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 469-821 |
| Cow position: | chr8:6958059-6957707 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 211, 206 |
| Conread position: | 470-878 |
| Cow position: | chr8:48407188-48406780 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 511-947 |
| Cow position: | chr8:55580885-55581321 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 526-961 |
| Cow position: | chr8:55580816-55581251 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 531-961 |
| Cow position: | chr8:48407631-48407201 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 534-957 |
| Cow position: | chr8:45200936-45201359 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 209, 215 |
| Conread position: | 553-900 |
| Cow position: | chr8:6958059-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 637-939 |
| Cow position: | chr8:6958059-6957758 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 285, 0 |
Show alignments to all cow chromosomes.