• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01H050087.5
        

               
Conread position:
               
1-151
               

               
Cow position:
               
chr18:16417837-16417690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr18:14048569-14048728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr18:15025534-15025714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr18:35012448-35012248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:18369503-18369286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:1585257-1585033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:29796565-29796348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:43020532-43020324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:47525273-47525488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr18:10656305-10656520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr18:11377230-11377445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:11322463-11322687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:33157678-33157906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr18:55806772-55806542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr18:25282693-25282462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:55015235-55015455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
167, 44
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:56159321-56159556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr18:21266377-21266606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:9008002-9008227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:16997112-16997356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:21102912-21102670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:39022121-39022351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 179
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr18:51392777-51392540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:21192547-21192307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:27109435-27109185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:47835687-47835932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:48453554-48453788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:5995329-5995598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr18:858679-858953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 231
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:4625762-4626023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:3387255-3386979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr18:55000878-55000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr18:2864135-2863854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr18:50625511-50625232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:39001942-39001665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:5766272-5766560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:26998741-26999041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:42747456-42747750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:37382233-37381937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:30586360-30586076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:9066559-9066862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:46048620-46048916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:50095534-50095247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:7134150-7134444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:7945515-7945803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:43950683-43950991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
30, 215
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:51644163-51643852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 297
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:19193506-19193205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:20271160-20270845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
31, 165
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:30341314-30341016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:42293191-42292896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:42290463-42290169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:179167-178865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:346639-346322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:3211732-3212052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 236
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:10322666-10322968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:19687880-19688200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:33896568-33896241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
10, 292
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:37023693-37023365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:43823086-43822781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:52637661-52637355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
169, 51
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:55692685-55692990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:39662639-39662954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr18:35663756-35664071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:10575968-10576280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
53, 198
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:4884651-4884341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:11867200-11867517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:18961976-18961653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:727897-728201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:4264531-4264215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:4668632-4668326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:7956003-7956329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:22121021-22120704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:48713409-48713721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:51406049-51405738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:4496026-4495710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:7487118-7487415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:7108988-7109314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:10214336-10214009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr18:20174269-20173952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:16227426-16227746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:6005635-6005318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:7950975-7951309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:2592308-2591972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:12058874-12059182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:51676229-51675899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr18:22274975-22274790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr18:4182328-4182121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:51656183-51655895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr18:36768944-36768657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr18:1144322-1144026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:29371730-29372041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
2-352
               

               
Cow position:
               
chr18:17391116-17390771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr18:7952512-7952719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr18:6609996-6609766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr18:4204059-4203839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr18:28768226-28768468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr18:21782566-21782852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr18:51643504-51643195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 235
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr18:5632127-5632441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 238
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr18:7415164-7414858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr18:12584975-12584664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr18:3044304-3044630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr18:55747552-55747849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr18:23616014-23615695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr18:55498938-55499232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr18:32873461-32873762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr18:52684737-52684421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr18:36458805-36459023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr18:22214354-22214586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr18:55140687-55140381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr18:31672638-31672331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
11-302
               

               
Cow position:
               
chr18:37303014-37303320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr18:7965101-7965413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr18:21251853-21252168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
11-322
               

               
Cow position:
               
chr18:25601447-25601140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr18:33299783-33299975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr18:49268108-49267809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr18:36746373-36746173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr18:19273220-19273003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 210
               

               
Conread position:
               
17-320
               

               
Cow position:
               
chr18:49038342-49038638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr18:41854707-41854388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
153, 7
               

               
Conread position:
               
19-213
               

               
Cow position:
               
chr18:52854935-52855135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr18:39434711-39434922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr18:55552857-55553139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 5
               

               
Conread position:
               
19-312
               

               
Cow position:
               
chr18:29648669-29648956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
19-314
               

               
Cow position:
               
chr18:40759090-40759399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr18:18592359-18592644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr18:30405778-30405474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
19-326
               

               
Cow position:
               
chr18:39623684-39623994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr18:51691579-51691266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr18:51756980-51757290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
20-179
               

               
Cow position:
               
chr18:4330842-4331006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
20-185
               

               
Cow position:
               
chr18:38996378-38996213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 63
               

               
Conread position:
               
20-225
               

               
Cow position:
               
chr18:17005142-17005353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
20-235
               

               
Cow position:
               
chr18:19896570-19896349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
20-235
               

               
Cow position:
               
chr18:48828896-48828673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr18:32883191-32883407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr18:15613975-15613715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
150, 198
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr18:12273542-12273809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:35873962-35874234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:49841163-49841439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
20-299
               

               
Cow position:
               
chr18:24266525-24266240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 200
               

               
Conread position:
               
20-301
               

               
Cow position:
               
chr18:55505292-55505568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr18:5072529-5072251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 200
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr18:11691523-11691240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr18:23623748-23623464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr18:42479703-42479414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr18:43283873-43283590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr18:50974409-50974122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
20-303
               

               
Cow position:
               
chr18:247797-247530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
150, 43
               

               
Conread position:
               
20-307
               

               
Cow position:
               
chr18:16044267-16043978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr18:45104560-45104258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr18:55549613-55549904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr18:3180305-3180587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr18:50382140-50382427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
20-313
               

               
Cow position:
               
chr18:22055995-22055683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
20-314
               

               
Cow position:
               
chr18:18919072-18918785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
20-314
               

               
Cow position:
               
chr18:23715002-23714709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr18:15517292-15516997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr18:34813536-34813831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr18:26355142-26354860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr18:56181579-56181278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr18:19849871-19849586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr18:3158716-3158421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
22-294
               

               
Cow position:
               
chr18:24759769-24759501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
23-226
               

               
Cow position:
               
chr18:7359633-7359838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
23-227
               

               
Cow position:
               
chr18:5078888-5078680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 176
               

               
Conread position:
               
23-234
               

               
Cow position:
               
chr18:52635191-52634970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 198
               

               
Conread position:
               
23-298
               

               
Cow position:
               
chr18:9365804-9366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 207
               

               
Conread position:
               
23-312
               

               
Cow position:
               
chr18:23169463-23169755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 275
               

               
Conread position:
               
23-315
               

               
Cow position:
               
chr18:43806345-43806632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr18:11684869-11685060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr18:19883418-19883646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr18:20175303-20175075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
24-264
               

               
Cow position:
               
chr18:33883673-33883917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
24-297
               

               
Cow position:
               
chr18:4758151-4757872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr18:4556277-4555998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr18:42212333-42212610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 247
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr18:29474629-29474914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
24-312
               

               
Cow position:
               
chr18:54572403-54572112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr18:42988424-42988126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr18:4612339-4612636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
24-317
               

               
Cow position:
               
chr18:17956492-17956197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
24-317
               

               
Cow position:
               
chr18:43555636-43555332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
24-383
               

               
Cow position:
               
chr18:35751488-35751129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 239
               

               
Conread position:
               
25-288
               

               
Cow position:
               
chr18:53776363-53776629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
26-291
               

               
Cow position:
               
chr18:53642862-53642595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
26-334
               

               
Cow position:
               
chr18:23162783-23163092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
29-179
               

               
Cow position:
               
chr18:18524695-18524542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr18:1732968-1732802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr18:21380670-21380466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
29-241
               

               
Cow position:
               
chr18:19646072-19646283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
29-302
               

               
Cow position:
               
chr18:47392294-47392575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
30-264
               

               
Cow position:
               
chr18:24508344-24508096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
30-269
               

               
Cow position:
               
chr18:2774241-2774003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 32
               

               
Conread position:
               
30-305
               

               
Cow position:
               
chr18:28930745-28930472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 191
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr18:1931559-1931278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr18:8880055-8880328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
34-307
               

               
Cow position:
               
chr18:5701148-5701435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr18:10065629-10065339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 208
               

               
Conread position:
               
36-213
               

               
Cow position:
               
chr18:56301790-56301972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
39-314
               

               
Cow position:
               
chr18:3422604-3422864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
43-302
               

               
Cow position:
               
chr18:52647739-52647477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 233
               

               
Conread position:
               
46-267
               

               
Cow position:
               
chr18:11754046-11754264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
47-192
               

               
Cow position:
               
chr18:2098829-2098685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
51-217
               

               
Cow position:
               
chr18:5711731-5711569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
51-228
               

               
Cow position:
               
chr18:4673224-4673397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
51-236
               

               
Cow position:
               
chr18:4871992-4872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr18:4624229-4624030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
51-298
               

               
Cow position:
               
chr18:2619294-2619044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
51-298
               

               
Cow position:
               
chr18:10977294-10977053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr18:12775867-12775609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr18:19868345-19868086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr18:36449814-36450076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-311
               

               
Cow position:
               
chr18:20462776-20462532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
51-315
               

               
Cow position:
               
chr18:20318125-20317884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr18:50959404-50959671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr18:44028148-44027971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr18:45903976-45903730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
55-262
               

               
Cow position:
               
chr18:48961856-48962065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr18:5600556-5600811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
13, 190
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr18:47123534-47123347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 163
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr18:47125478-47125252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 157
               

               
Conread position:
               
57-302
               

               
Cow position:
               
chr18:27388508-27388762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr18:5647736-5647973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
112, 163
               

               
Conread position:
               
58-361
               

               
Cow position:
               
chr18:21708205-21707883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
59-202
               

               
Cow position:
               
chr18:1607179-1607318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr18:55583344-55583595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 96
               

               
Conread position:
               
59-316
               

               
Cow position:
               
chr18:56146440-56146181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
61-315
               

               
Cow position:
               
chr18:23941696-23941437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr18:7963708-7963962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
62-325
               

               
Cow position:
               
chr18:13810281-13810548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 124
               

               
Conread position:
               
64-301
               

               
Cow position:
               
chr18:52649416-52649174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr18:36229752-36229503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 213
               

               
Conread position:
               
65-225
               

               
Cow position:
               
chr18:19787907-19788072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
65-317
               

               
Cow position:
               
chr18:6278544-6278294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
68-203
               

               
Cow position:
               
chr18:14888224-14888361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
68-243
               

               
Cow position:
               
chr18:24342776-24342954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
68-274
               

               
Cow position:
               
chr18:7481087-7481289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr18:45558081-45558315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
68-315
               

               
Cow position:
               
chr18:10051681-10051925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
68-315
               

               
Cow position:
               
chr18:11856834-11857074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 150
               

               
Conread position:
               
68-315
               

               
Cow position:
               
chr18:18843948-18844189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
69-288
               

               
Cow position:
               
chr18:1392638-1392417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
69-302
               

               
Cow position:
               
chr18:2146643-2146426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr18:47416937-47417174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
69-311
               

               
Cow position:
               
chr18:46108454-46108208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 148
               

               
Conread position:
               
70-218
               

               
Cow position:
               
chr18:2549367-2549218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
70-226
               

               
Cow position:
               
chr18:22170553-22170711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
70-302
               

               
Cow position:
               
chr18:32599988-32600220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
70-302
               

               
Cow position:
               
chr18:53053298-53053063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr18:13172595-13172357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
71-291
               

               
Cow position:
               
chr18:40047561-40047349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr18:33158879-33159105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr18:56183567-56183338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr18:25063898-25063665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr18:48441724-48441953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr18:52170803-52171032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 96
               

               
Conread position:
               
71-303
               

               
Cow position:
               
chr18:45622868-45622635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
99, 191
               

               
Conread position:
               
71-308
               

               
Cow position:
               
chr18:263079-263318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
71-308
               

               
Cow position:
               
chr18:55701728-55701489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 224
               

               
Conread position:
               
71-310
               

               
Cow position:
               
chr18:44908990-44909226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
71-325
               

               
Cow position:
               
chr18:46072399-46072660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 198
               

               
Conread position:
               
72-228
               

               
Cow position:
               
chr18:24529931-24529777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
72-235
               

               
Cow position:
               
chr18:51212779-51212938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
72-264
               

               
Cow position:
               
chr18:46647219-46647035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
72-289
               

               
Cow position:
               
chr18:47565764-47565968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
72-291
               

               
Cow position:
               
chr18:51998908-51998687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr18:54513053-54513278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 115
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr18:35367255-35367041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr18:49015066-49015280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr18:38937759-38937986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr18:3115389-3115628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr18:12270440-12270692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr18:43797018-43796774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr18:380870-381116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr18:31557222-31556964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr18:23447122-23446913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
73-283
               

               
Cow position:
               
chr18:48113025-48112819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr18:24672180-24672397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr18:14586532-14586308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
97, 154
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr18:9756016-9756254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 215
               

               
Conread position:
               
73-311
               

               
Cow position:
               
chr18:39811643-39811408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr18:46880230-46879982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr18:6470032-6470273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 149
               

               
Conread position:
               
73-378
               

               
Cow position:
               
chr18:52251918-52251614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
74-279
               

               
Cow position:
               
chr18:20283202-20283406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
74-285
               

               
Cow position:
               
chr18:38601945-38601736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
74-287
               

               
Cow position:
               
chr18:17368640-17368426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-288
               

               
Cow position:
               
chr18:19629066-19628850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
74-288
               

               
Cow position:
               
chr18:42455082-42454867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
74-290
               

               
Cow position:
               
chr18:47920680-47920898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr18:31082409-31082181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr18:35889155-35888926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr18:38669871-38669661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
74-299
               

               
Cow position:
               
chr18:6399693-6399459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
74-300
               

               
Cow position:
               
chr18:42438207-42437992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr18:135714-135494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr18:19765128-19765352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 158
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr18:44137435-44137660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr18:52454871-52454639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 210
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr18:56155460-56155682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr18:1735642-1735427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr18:7966181-7966416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 194
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr18:9029549-9029785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr18:24719252-24719482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
74-311
               

               
Cow position:
               
chr18:14225335-14225563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr18:20641556-20641321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr18:44262570-44262802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
74-322
               

               
Cow position:
               
chr18:40281163-40280906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
74-331
               

               
Cow position:
               
chr18:51827220-51827478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 93
               

               
Conread position:
               
75-222
               

               
Cow position:
               
chr18:30387296-30387144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
75-308
               

               
Cow position:
               
chr18:39110123-39110356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
76-283
               

               
Cow position:
               
chr18:49655626-49655828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr18:46880764-46880535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr18:51192798-51192586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 144
               

               
Conread position:
               
77-302
               

               
Cow position:
               
chr18:9896051-9895831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
77-302
               

               
Cow position:
               
chr18:23653181-23652947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 178
               

               
Conread position:
               
77-316
               

               
Cow position:
               
chr18:11233358-11233601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
78-315
               

               
Cow position:
               
chr18:38211104-38211338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
78-323
               

               
Cow position:
               
chr18:50359276-50359511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
78-337
               

               
Cow position:
               
chr18:16659489-16659225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr18:39168477-39168692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
81-311
               

               
Cow position:
               
chr18:15861181-15861411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
81-312
               

               
Cow position:
               
chr18:14172261-14172037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
82-235
               

               
Cow position:
               
chr18:38757891-38757731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
82-291
               

               
Cow position:
               
chr18:19295835-19296030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
82-302
               

               
Cow position:
               
chr18:22569119-22568902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 134
               

               
Conread position:
               
82-302
               

               
Cow position:
               
chr18:35692803-35693041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
82-312
               

               
Cow position:
               
chr18:35827426-35827201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
82-374
               

               
Cow position:
               
chr18:51867602-51867315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr18:19433712-19433860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
83-288
               

               
Cow position:
               
chr18:55470781-55470980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
83-301
               

               
Cow position:
               
chr18:42427568-42427781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 149
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr18:25757363-25757142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
83-312
               

               
Cow position:
               
chr18:19640920-19641149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
83-315
               

               
Cow position:
               
chr18:32253561-32253327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
104, 127
               

               
Conread position:
               
84-209
               

               
Cow position:
               
chr18:52003481-52003606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr18:16545513-16545296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr18:242357-242604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr18:20481003-20480756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
84-326
               

               
Cow position:
               
chr18:27078817-27079055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
85-235
               

               
Cow position:
               
chr18:4757620-4757470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 120
               

               
Conread position:
               
85-283
               

               
Cow position:
               
chr18:55733756-55733559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
85-301
               

               
Cow position:
               
chr18:47548036-47547817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 192
               

               
Conread position:
               
85-302
               

               
Cow position:
               
chr18:51383445-51383232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
85-309
               

               
Cow position:
               
chr18:1954639-1954407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 173
               

               
Conread position:
               
86-226
               

               
Cow position:
               
chr18:47410494-47410636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
86-302
               

               
Cow position:
               
chr18:40063040-40063260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 178
               

               
Conread position:
               
86-312
               

               
Cow position:
               
chr18:50632491-50632270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 105
               

               
Conread position:
               
87-231
               

               
Cow position:
               
chr18:22001415-22001561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
87-312
               

               
Cow position:
               
chr18:22790133-22789914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr18:41950161-41950392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr18:44917709-44917936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr18:9974376-9974146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 142
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr18:10904802-10905027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
88-254
               

               
Cow position:
               
chr18:6330220-6330388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr18:47485997-47486198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr18:29495110-29495317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 177
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr18:30360198-30359982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
88-302
               

               
Cow position:
               
chr18:11657610-11657825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
88-302
               

               
Cow position:
               
chr18:38363427-38363642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr18:4628995-4629217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr18:30225577-30225357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 150
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr18:49200586-49200807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr18:25106898-25107121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
89-302
               

               
Cow position:
               
chr18:45898846-45899061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr18:20257604-20257386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 180
               

               
Conread position:
               
89-315
               

               
Cow position:
               
chr18:20309046-20309274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
89-333
               

               
Cow position:
               
chr18:5189747-5189494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
90-302
               

               
Cow position:
               
chr18:3164559-3164347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 183
               

               
Conread position:
               
90-308
               

               
Cow position:
               
chr18:46276347-46276127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
91-284
               

               
Cow position:
               
chr18:31727699-31727497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
91-301
               

               
Cow position:
               
chr18:19796967-19796752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
92-310
               

               
Cow position:
               
chr18:9846453-9846243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
207, 71
               

               
Conread position:
               
92-317
               

               
Cow position:
               
chr18:53093061-53092834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 164
               

               
Conread position:
               
93-308
               

               
Cow position:
               
chr18:23648880-23649098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
93-322
               

               
Cow position:
               
chr18:14587232-14587463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
94-235
               

               
Cow position:
               
chr18:4467027-4466884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-248
               

               
Cow position:
               
chr18:29080766-29080922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-269
               

               
Cow position:
               
chr18:19157833-19158010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-300
               

               
Cow position:
               
chr18:37188038-37187830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-312
               

               
Cow position:
               
chr18:50566860-50567080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
94-321
               

               
Cow position:
               
chr18:51178769-51178528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr18:26873387-26873582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
97-332
               

               
Cow position:
               
chr18:238153-237916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
99-288
               

               
Cow position:
               
chr18:42720026-42719839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
99-303
               

               
Cow position:
               
chr18:32526890-32526684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
99-308
               

               
Cow position:
               
chr18:24136335-24136125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
100-315
               

               
Cow position:
               
chr18:9010673-9010882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 135
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr18:52644504-52644289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
101-288
               

               
Cow position:
               
chr18:47872007-47872185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr18:31159307-31159106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
102-298
               

               
Cow position:
               
chr18:19809715-19809521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
102-299
               

               
Cow position:
               
chr18:39710076-39710278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
102-302
               

               
Cow position:
               
chr18:30673460-30673273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
102-307
               

               
Cow position:
               
chr18:34490247-34490452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
102-315
               

               
Cow position:
               
chr18:45185838-45186050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 185
               

               
Conread position:
               
103-301
               

               
Cow position:
               
chr18:18664405-18664200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-302
               

               
Cow position:
               
chr18:33756989-33757180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
103-307
               

               
Cow position:
               
chr18:23810152-23809950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 158
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr18:14576996-14577198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 167
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr18:24946056-24946252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr18:56463762-56463556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
103-316
               

               
Cow position:
               
chr18:49603076-49602862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
5, 118
               

               
Conread position:
               
103-317
               

               
Cow position:
               
chr18:8208457-8208243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 114
               

               
Conread position:
               
104-302
               

               
Cow position:
               
chr18:41702806-41703000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
104-302
               

               
Cow position:
               
chr18:52382873-52383073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr18:36191035-36190827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr18:1859168-1858953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
104-321
               

               
Cow position:
               
chr18:20998447-20998226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 205
               

               
Conread position:
               
104-346
               

               
Cow position:
               
chr18:49970684-49970445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 169
               

               
Conread position:
               
105-225
               

               
Cow position:
               
chr18:49982700-49982822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
105-264
               

               
Cow position:
               
chr18:3518238-3518392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
105-268
               

               
Cow position:
               
chr18:23821862-23821697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
105-302
               

               
Cow position:
               
chr18:35795252-35795054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
105-302
               

               
Cow position:
               
chr18:39097606-39097406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
105-308
               

               
Cow position:
               
chr18:39115148-39114946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 168
               

               
Conread position:
               
105-314
               

               
Cow position:
               
chr18:45897702-45897906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
105-315
               

               
Cow position:
               
chr18:21751345-21751560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr18:11330190-11330395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
106-319
               

               
Cow position:
               
chr18:39460191-39460399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
107-288
               

               
Cow position:
               
chr18:41639187-41639007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
107-292
               

               
Cow position:
               
chr18:3098060-3097869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
107-302
               

               
Cow position:
               
chr18:4489936-4489734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
107-312
               

               
Cow position:
               
chr18:51395913-51395718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
107-317
               

               
Cow position:
               
chr18:52691686-52691896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
107-341
               

               
Cow position:
               
chr18:49161331-49161095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
108-302
               

               
Cow position:
               
chr18:2108220-2108414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
109-302
               

               
Cow position:
               
chr18:2144545-2144736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 126
               

               
Conread position:
               
109-312
               

               
Cow position:
               
chr18:29798300-29798107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
110-297
               

               
Cow position:
               
chr18:4718234-4718421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 169
               

               
Conread position:
               
110-317
               

               
Cow position:
               
chr18:697242-697036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
197, 64
               

               
Conread position:
               
111-298
               

               
Cow position:
               
chr18:19962167-19961974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
111-299
               

               
Cow position:
               
chr18:49040640-49040443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr18:46985594-46985395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
111-355
               

               
Cow position:
               
chr18:31969-32208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr18:24022595-24022779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
112-308
               

               
Cow position:
               
chr18:22905981-22905783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
112-316
               

               
Cow position:
               
chr18:23380108-23380307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
112-329
               

               
Cow position:
               
chr18:29188363-29188587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 210
               

               
Conread position:
               
113-285
               

               
Cow position:
               
chr18:26586636-26586463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
113-301
               

               
Cow position:
               
chr18:43801780-43801595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
113-302
               

               
Cow position:
               
chr18:50004724-50004540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
113-316
               

               
Cow position:
               
chr18:14871631-14871424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
113-316
               

               
Cow position:
               
chr18:45573358-45573561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
114-298
               

               
Cow position:
               
chr18:4773009-4772827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr18:19229899-19230084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr18:50612551-50612354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
115-307
               

               
Cow position:
               
chr18:37414989-37414796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
115-315
               

               
Cow position:
               
chr18:21562946-21562743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
116-298
               

               
Cow position:
               
chr18:35236053-35235859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
116-312
               

               
Cow position:
               
chr18:10861113-10860914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
116-312
               

               
Cow position:
               
chr18:32992364-32992555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr18:39860791-39860597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
116-321
               

               
Cow position:
               
chr18:23898399-23898597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
117-284
               

               
Cow position:
               
chr18:4715626-4715463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
117-313
               

               
Cow position:
               
chr18:49281081-49280886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
119-266
               

               
Cow position:
               
chr18:18689115-18688965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
119-308
               

               
Cow position:
               
chr18:16381842-16382033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr18:21528632-21528829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr18:17195360-17195166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
121-283
               

               
Cow position:
               
chr18:55733279-55733442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
121-311
               

               
Cow position:
               
chr18:8975382-8975567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
121-317
               

               
Cow position:
               
chr18:27637478-27637675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr18:50293848-50294035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 185
               

               
Conread position:
               
122-311
               

               
Cow position:
               
chr18:26262226-26262036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
122-312
               

               
Cow position:
               
chr18:19386002-19385814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
123-302
               

               
Cow position:
               
chr18:3412351-3412530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
123-302
               

               
Cow position:
               
chr18:52387232-52387052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
123-308
               

               
Cow position:
               
chr18:21401313-21401126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr18:4000334-4000532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
124-308
               

               
Cow position:
               
chr18:14201254-14201068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
124-312
               

               
Cow position:
               
chr18:35950024-35950223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
124-333
               

               
Cow position:
               
chr18:14874541-14874751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 206
               

               
Conread position:
               
125-302
               

               
Cow position:
               
chr18:40028205-40028390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr18:2098100-2097910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr18:21878467-21878283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr18:1662595-1662402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr18:44044351-44044160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
126-382
               

               
Cow position:
               
chr18:35857933-35857669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr18:29402186-29402358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chr18:28810362-28810189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr18:47175383-47175206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
134-290
               

               
Cow position:
               
chr18:47306909-47306750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
134-315
               

               
Cow position:
               
chr18:48092918-48092734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
135-316
               

               
Cow position:
               
chr18:3709230-3709410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
136-302
               

               
Cow position:
               
chr18:15351729-15351562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr18:44514089-44514273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr18:50276240-50276063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
139-292
               

               
Cow position:
               
chr18:41253544-41253699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr18:51976025-51976216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
142-316
               

               
Cow position:
               
chr18:4485606-4485776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
142-318
               

               
Cow position:
               
chr18:892046-891868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
143-314
               

               
Cow position:
               
chr18:51711741-51711572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
145-291
               

               
Cow position:
               
chr18:19143962-19143815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
145-316
               

               
Cow position:
               
chr18:10668343-10668516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chr18:34389371-34389187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
149-296
               

               
Cow position:
               
chr18:28540098-28539950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
149-316
               

               
Cow position:
               
chr18:35171362-35171529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr18:37690168-37690331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
153-364
               

               
Cow position:
               
chr18:4857706-4857497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr18:29945553-29945715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
182-331
               

               
Cow position:
               
chr18:20391254-20391401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
187-316
               

               
Cow position:
               
chr18:32960131-32960261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
189-353
               

               
Cow position:
               
chr18:30295550-30295394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
191-302
               

               
Cow position:
               
chr18:39079530-39079417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.