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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01H050087.5
        

               
Conread position:
               
1-136
               

               
Cow position:
               
chr28:16252962-16252817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr28:3714703-3714860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr28:13195276-13195438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr28:12758604-12758433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr28:10529586-10529410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr28:11786814-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr28:4841494-4841280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr28:18354425-18354210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr28:11818065-11817845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr28:5166664-5166890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr28:3078783-3078555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr28:32174527-32174758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr28:25806470-25806693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr28:2960934-2960698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr28:21355121-21355364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr28:16085222-16085460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr28:19026114-19025871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr28:22321324-22321554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr28:25195611-25195842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr28:34248125-34247892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr28:12946846-12947095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr28:25728097-25728342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:1538069-1538332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr28:13527102-13527370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr28:12363263-12362970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr28:18370110-18369821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr28:2523844-2524141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr28:7268038-7267750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:6059567-6059271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:19564330-19564035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:22308547-22308844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr28:15601173-15601475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr28:751128-751430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr28:3024014-3023714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 211
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr28:34430524-34430221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr28:23007836-23007539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 226
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:4016436-4016727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:5236700-5236391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:20759798-20759489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:23724557-23724265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:24966289-24966590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:25700969-25700666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:30746830-30746534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:34230129-34230435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr28:5144619-5144303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr28:10057691-10057377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr28:10495383-10495090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr28:15263819-15263507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr28:27218222-27218535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr28:8291330-8291623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr28:23460049-23460355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr28:28766001-28765691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr28:6358512-6358197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr28:25727276-25727581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr28:4643866-4643556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr28:5817741-5818055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:3484475-3484804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:4158856-4159182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:8347629-8347951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:23447926-23447616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:23616306-23616623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr28:4881339-4881029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr28:21103938-21103601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr28:23410427-23410116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:14657599-14657939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr28:22571767-22571456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr28:19054916-19055250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr28:16416543-16416883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr28:4308006-4307627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr28:21502293-21502655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr28:25677443-25677212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr28:19079944-19079709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr28:29434526-29434288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr28:10999775-10999538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 177
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr28:23793406-23793145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr28:25399779-25400042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr28:10681920-10681641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr28:12933832-12933535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr28:4834943-4834638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr28:24693176-24693482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr28:9099835-9100141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr28:26982838-26982516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr28:9812182-9812514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr28:16109842-16110078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr28:19222250-19221963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr28:30303292-30303027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr28:5139092-5138795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 195
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr28:7350560-7350854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr28:11426642-11426344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr28:5224615-5224907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
155, 68
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr28:10053432-10053120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 231
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr28:13245465-13245777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr28:13090619-13090384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr28:12672557-12672258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr28:25249263-25249494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr28:31110094-31109860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr28:7144699-7145004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 215
               

               
Conread position:
               
11-305
               

               
Cow position:
               
chr28:4645054-4644742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
11-305
               

               
Cow position:
               
chr28:26151937-26152218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr28:11559724-11559453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 226
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr28:17071252-17071530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
17-321
               

               
Cow position:
               
chr28:10297781-10298062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 7
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr28:7388845-7388636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 100
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr28:7009054-7008777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr28:5437166-5436876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
19-310
               

               
Cow position:
               
chr28:5684632-5684912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
19-312
               

               
Cow position:
               
chr28:16204407-16204116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
19-326
               

               
Cow position:
               
chr28:11866744-11866440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr28:21380801-21380992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 178
               

               
Conread position:
               
20-208
               

               
Cow position:
               
chr28:32365765-32365956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr28:21598331-21598133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
20-217
               

               
Cow position:
               
chr28:8408657-8408846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
20-217
               

               
Cow position:
               
chr28:26922444-26922246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
20-275
               

               
Cow position:
               
chr28:18625152-18625414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
20-288
               

               
Cow position:
               
chr28:21363668-21363930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr28:5931275-5931544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chr28:9285451-9285175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr28:7372199-7371906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr28:8787462-8787743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr28:29416792-29416521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
20-306
               

               
Cow position:
               
chr28:12430530-12430812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
20-307
               

               
Cow position:
               
chr28:3011350-3011058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr28:3492862-3492577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr28:28631653-28631960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr28:8358828-8359120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr28:34878047-34877754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr28:616306-616588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr28:8140405-8140701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 248
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr28:23530792-23531089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 188
               

               
Conread position:
               
20-351
               

               
Cow position:
               
chr28:7698057-7697730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
23-279
               

               
Cow position:
               
chr28:26055407-26055659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr28:4045778-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
24-185
               

               
Cow position:
               
chr28:5792633-5792797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
24-203
               

               
Cow position:
               
chr28:3161027-3160846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
24-235
               

               
Cow position:
               
chr28:20313202-20313419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr28:2752568-2752353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr28:8147935-8147723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr28:27161401-27161186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
24-299
               

               
Cow position:
               
chr28:12951356-12951617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr28:662035-662304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr28:10669502-10669791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr28:11762624-11762902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr28:19262661-19262380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
24-322
               

               
Cow position:
               
chr28:24672191-24672494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
24-325
               

               
Cow position:
               
chr28:25973461-25973766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 190
               

               
Conread position:
               
24-350
               

               
Cow position:
               
chr28:5826878-5827185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr28:16403285-16403540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr28:28809885-28810156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
28-316
               

               
Cow position:
               
chr28:7439175-7439457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr28:17398294-17398094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr28:17414535-17414335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
29-302
               

               
Cow position:
               
chr28:17012360-17012101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
29-312
               

               
Cow position:
               
chr28:23296256-23296533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
29-315
               

               
Cow position:
               
chr28:4282558-4282272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr28:26743557-26743821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
30-296
               

               
Cow position:
               
chr28:5273506-5273229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
30-302
               

               
Cow position:
               
chr28:11346551-11346285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr28:3449234-3449527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
31-302
               

               
Cow position:
               
chr28:19361673-19361943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
31-315
               

               
Cow position:
               
chr28:1837928-1838215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
32-307
               

               
Cow position:
               
chr28:16405681-16405957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
33-224
               

               
Cow position:
               
chr28:4765611-4765804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
39-232
               

               
Cow position:
               
chr28:30865359-30865552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
39-302
               

               
Cow position:
               
chr28:12088705-12088442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
39-316
               

               
Cow position:
               
chr28:18847491-18847780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 181
               

               
Conread position:
               
40-288
               

               
Cow position:
               
chr28:20397427-20397176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
40-317
               

               
Cow position:
               
chr28:1632706-1632434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
45-236
               

               
Cow position:
               
chr28:7498199-7498006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
51-228
               

               
Cow position:
               
chr28:5650781-5650605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
51-231
               

               
Cow position:
               
chr28:2131970-2131788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr28:5235838-5236078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr28:7619196-7618956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr28:11815122-11814875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr28:34843618-34843368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr28:12662444-12662180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr28:28560852-28561108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
51-312
               

               
Cow position:
               
chr28:11527304-11527045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
119, 95
               

               
Conread position:
               
51-316
               

               
Cow position:
               
chr28:20124740-20124999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr28:3726257-3725990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
52-316
               

               
Cow position:
               
chr28:3445525-3445260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 39
               

               
Conread position:
               
56-299
               

               
Cow position:
               
chr28:6975202-6975435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
56-302
               

               
Cow position:
               
chr28:17739785-17740029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
56-302
               

               
Cow position:
               
chr28:17949154-17948913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 161
               

               
Conread position:
               
56-315
               

               
Cow position:
               
chr28:21046616-21046369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
174, 27
               

               
Conread position:
               
56-391
               

               
Cow position:
               
chr28:19128208-19127881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
57-221
               

               
Cow position:
               
chr28:7156797-7156963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr28:17680584-17680845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
60-317
               

               
Cow position:
               
chr28:13371174-13370921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
63-296
               

               
Cow position:
               
chr28:27721669-27721894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
63-344
               

               
Cow position:
               
chr28:26826194-26826467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
107, 8
               

               
Conread position:
               
64-311
               

               
Cow position:
               
chr28:7964700-7964465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
64-353
               

               
Cow position:
               
chr28:26944190-26943897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
66-311
               

               
Cow position:
               
chr28:118578-118827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr28:8259597-8259847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
66-331
               

               
Cow position:
               
chr28:13505041-13504775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
68-300
               

               
Cow position:
               
chr28:3200430-3200664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
68-308
               

               
Cow position:
               
chr28:1315580-1315337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
69-228
               

               
Cow position:
               
chr28:25762995-25763154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr28:22132884-22133118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr28:26264799-26265040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
69-309
               

               
Cow position:
               
chr28:2933455-2933216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr28:5630070-5630317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 104
               

               
Conread position:
               
69-322
               

               
Cow position:
               
chr28:3406438-3406187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
70-296
               

               
Cow position:
               
chr28:22323243-22323457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
70-300
               

               
Cow position:
               
chr28:25056938-25057158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr28:4090081-4089843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr28:5254848-5255094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr28:4937269-4937012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 246
               

               
Conread position:
               
71-267
               

               
Cow position:
               
chr28:19295154-19294964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
71-278
               

               
Cow position:
               
chr28:8112300-8112090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
71-288
               

               
Cow position:
               
chr28:10699835-10700050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr28:6935211-6934972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
71-341
               

               
Cow position:
               
chr28:14151196-14151468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 242
               

               
Conread position:
               
72-220
               

               
Cow position:
               
chr28:14933933-14934083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr28:5230151-5229999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
72-239
               

               
Cow position:
               
chr28:23047596-23047762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr28:4013059-4013287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 157
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr28:32179672-32179903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr28:1383310-1383051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr28:6283512-6283272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr28:11398822-11398574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
73-236
               

               
Cow position:
               
chr28:2772689-2772851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr28:12598315-12598550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr28:11743842-11743612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
74-228
               

               
Cow position:
               
chr28:17136314-17136159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
74-267
               

               
Cow position:
               
chr28:3408241-3408053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 142
               

               
Conread position:
               
74-269
               

               
Cow position:
               
chr28:2819752-2819943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
74-279
               

               
Cow position:
               
chr28:4138693-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
74-296
               

               
Cow position:
               
chr28:23578878-23579100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr28:24082248-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
74-301
               

               
Cow position:
               
chr28:4185884-4186106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr28:9636480-9636253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 138
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr28:24367965-24367738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr28:2801203-2801436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
96, 100
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr28:13133610-13133844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr28:2077467-2077711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr28:12991113-12991346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr28:15272296-15272060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr28:2775024-2775264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr28:10958771-10959013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr28:24706874-24707110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr28:11307541-11307300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 189
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr28:10845083-10845320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
74-329
               

               
Cow position:
               
chr28:18770062-18770317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
74-366
               

               
Cow position:
               
chr28:13356390-13356098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
75-302
               

               
Cow position:
               
chr28:26340310-26340538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 134
               

               
Conread position:
               
75-312
               

               
Cow position:
               
chr28:19216800-19217028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
76-302
               

               
Cow position:
               
chr28:5231918-5232144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
76-316
               

               
Cow position:
               
chr28:11059481-11059709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
77-241
               

               
Cow position:
               
chr28:8149652-8149486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
77-264
               

               
Cow position:
               
chr28:7437482-7437300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
77-316
               

               
Cow position:
               
chr28:11197689-11197454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
77-317
               

               
Cow position:
               
chr28:19015696-19015919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
77-317
               

               
Cow position:
               
chr28:21008685-21008453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 74
               

               
Conread position:
               
78-312
               

               
Cow position:
               
chr28:17358053-17357810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr28:5805654-5805881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
82-228
               

               
Cow position:
               
chr28:17601569-17601421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
82-268
               

               
Cow position:
               
chr28:2898974-2899168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
82-290
               

               
Cow position:
               
chr28:16450555-16450340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
82-302
               

               
Cow position:
               
chr28:20173821-20174042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
82-312
               

               
Cow position:
               
chr28:29661732-29661971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
82-325
               

               
Cow position:
               
chr28:13048298-13048055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
83-311
               

               
Cow position:
               
chr28:10480821-10480588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
83-312
               

               
Cow position:
               
chr28:3143889-3143673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
83-312
               

               
Cow position:
               
chr28:9384301-9384078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
83-316
               

               
Cow position:
               
chr28:1655112-1654873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
84-224
               

               
Cow position:
               
chr28:10163787-10163926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
84-287
               

               
Cow position:
               
chr28:14645125-14644913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
84-311
               

               
Cow position:
               
chr28:14720797-14720571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr28:4823591-4823813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
84-362
               

               
Cow position:
               
chr28:5199807-5200088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 248
               

               
Conread position:
               
85-302
               

               
Cow position:
               
chr28:10977829-10978042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
85-302
               

               
Cow position:
               
chr28:29850827-29850618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr28:4070955-4071172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr28:15362567-15362793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
85, 148
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr28:7132099-7131875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr28:11828968-11828742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr28:11987162-11987384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr28:12055400-12055622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
86-298
               

               
Cow position:
               
chr28:7014442-7014654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
84, 124
               

               
Conread position:
               
86-311
               

               
Cow position:
               
chr28:1531996-1532219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 163
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr28:26531287-26531091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr28:777665-777897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr28:9705643-9705874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr28:26810669-26810899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
88-241
               

               
Cow position:
               
chr28:30081733-30081579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
88-283
               

               
Cow position:
               
chr28:7557743-7557545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-298
               

               
Cow position:
               
chr28:5188438-5188229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
88-302
               

               
Cow position:
               
chr28:26215756-26215972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr28:4440287-4440509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr28:9426359-9426141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr28:23262461-23262240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
88-316
               

               
Cow position:
               
chr28:8396326-8396543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
89-298
               

               
Cow position:
               
chr28:19039027-19038818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
89-302
               

               
Cow position:
               
chr28:24064903-24064688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr28:6563906-6563684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr28:10615954-10615727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr28:30922070-30921834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
89-334
               

               
Cow position:
               
chr28:18797312-18797542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
90-302
               

               
Cow position:
               
chr28:5552722-5552503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
90-312
               

               
Cow position:
               
chr28:27313739-27313512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
91-303
               

               
Cow position:
               
chr28:4914097-4913887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr28:5441901-5441693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr28:30902122-30902325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
93-316
               

               
Cow position:
               
chr28:23638674-23638889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
93-326
               

               
Cow position:
               
chr28:18474637-18474880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
94-231
               

               
Cow position:
               
chr28:31987731-31987870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-239
               

               
Cow position:
               
chr28:13241568-13241421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-282
               

               
Cow position:
               
chr28:22332525-22332714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 179
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr28:5673872-5674082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 133
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr28:6321814-6322051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr28:21779177-21779389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 172
               

               
Conread position:
               
95-315
               

               
Cow position:
               
chr28:11411538-11411320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
95-317
               

               
Cow position:
               
chr28:4163581-4163362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
96-268
               

               
Cow position:
               
chr28:4355547-4355721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
96-283
               

               
Cow position:
               
chr28:18608369-18608180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr28:12973880-12974094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
96-311
               

               
Cow position:
               
chr28:29499009-29498792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
97-288
               

               
Cow position:
               
chr28:11451492-11451315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
98-302
               

               
Cow position:
               
chr28:24996612-24996414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
98-308
               

               
Cow position:
               
chr28:16543997-16544204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
99-236
               

               
Cow position:
               
chr28:29042052-29041911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
99-308
               

               
Cow position:
               
chr28:14242695-14242906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
100-317
               

               
Cow position:
               
chr28:19994943-19994727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
101-274
               

               
Cow position:
               
chr28:8167346-8167176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr28:28602757-28602964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
101-320
               

               
Cow position:
               
chr28:2821257-2821482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 205
               

               
Conread position:
               
102-217
               

               
Cow position:
               
chr28:16691928-16692045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
102-236
               

               
Cow position:
               
chr28:2743086-2743221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
102-298
               

               
Cow position:
               
chr28:3137548-3137753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
102-298
               

               
Cow position:
               
chr28:20968575-20968376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
102-303
               

               
Cow position:
               
chr28:17656424-17656620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
102-333
               

               
Cow position:
               
chr28:4022678-4022905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
103-207
               

               
Cow position:
               
chr28:16388912-16389018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-301
               

               
Cow position:
               
chr28:4073975-4074180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
103-302
               

               
Cow position:
               
chr28:13174558-13174350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr28:23650226-23650015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr28:25827725-25827518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-311
               

               
Cow position:
               
chr28:117757-117545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
104-300
               

               
Cow position:
               
chr28:10203126-10203314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
104-302
               

               
Cow position:
               
chr28:29217609-29217808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
105-217
               

               
Cow position:
               
chr28:10247497-10247610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
105-300
               

               
Cow position:
               
chr28:8716379-8716178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
105-308
               

               
Cow position:
               
chr28:7132374-7132169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
105-315
               

               
Cow position:
               
chr28:7644748-7644960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
105-339
               

               
Cow position:
               
chr28:22630020-22630259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr28:32014793-32014995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
106-357
               

               
Cow position:
               
chr28:11759554-11759294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr28:7265355-7265475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
107-310
               

               
Cow position:
               
chr28:26820266-26820064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr28:5403031-5402833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
110-260
               

               
Cow position:
               
chr28:7541863-7541702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
110-273
               

               
Cow position:
               
chr28:22307022-22307184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
110-285
               

               
Cow position:
               
chr28:18176234-18176057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
110-302
               

               
Cow position:
               
chr28:659282-659083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
111-302
               

               
Cow position:
               
chr28:10252903-10252711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
111-302
               

               
Cow position:
               
chr28:20281772-20281952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
111-302
               

               
Cow position:
               
chr28:26530852-26530664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
111-312
               

               
Cow position:
               
chr28:19394886-19395078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
111-326
               

               
Cow position:
               
chr28:32593623-32593409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
112-302
               

               
Cow position:
               
chr28:3423792-3423981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 99
               

               
Conread position:
               
112-309
               

               
Cow position:
               
chr28:11827703-11827901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
113-307
               

               
Cow position:
               
chr28:2825435-2825630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 173
               

               
Conread position:
               
113-307
               

               
Cow position:
               
chr28:18928951-18928755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
114-316
               

               
Cow position:
               
chr28:27445556-27445357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
115-300
               

               
Cow position:
               
chr28:7413677-7413865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
115-315
               

               
Cow position:
               
chr28:11798761-11798558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
115-318
               

               
Cow position:
               
chr28:23728281-23728090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
115-320
               

               
Cow position:
               
chr28:10196847-10196647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
116-257
               

               
Cow position:
               
chr28:25459772-25459913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
116-288
               

               
Cow position:
               
chr28:13160527-13160353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
116-302
               

               
Cow position:
               
chr28:11006745-11006930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
116-302
               

               
Cow position:
               
chr28:22085523-22085342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr28:7885048-7885254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr28:34463934-34464127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
117-321
               

               
Cow position:
               
chr28:18791062-18791257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr28:8898064-8898279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr28:5609894-5609714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
120-309
               

               
Cow position:
               
chr28:24887615-24887807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr28:3678385-3678577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr28:1178301-1178100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr28:2892275-2892474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
120-321
               

               
Cow position:
               
chr28:18761980-18761786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
120-322
               

               
Cow position:
               
chr28:17620337-17620131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
121-308
               

               
Cow position:
               
chr28:4870781-4870586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
121-322
               

               
Cow position:
               
chr28:11239296-11239087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 158
               

               
Conread position:
               
124-301
               

               
Cow position:
               
chr28:30385180-30385358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
124-315
               

               
Cow position:
               
chr28:21765982-21766172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr28:3729990-3729830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
127-288
               

               
Cow position:
               
chr28:26269416-26269589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
127-301
               

               
Cow position:
               
chr28:16857077-16856903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
127-315
               

               
Cow position:
               
chr28:12400265-12400459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
127-316
               

               
Cow position:
               
chr28:9677699-9677880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
127-316
               

               
Cow position:
               
chr28:21744745-21744930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
128-285
               

               
Cow position:
               
chr28:19118000-19118159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
128-288
               

               
Cow position:
               
chr28:10855687-10855531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
128-308
               

               
Cow position:
               
chr28:11562215-11562033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
129-302
               

               
Cow position:
               
chr28:24698722-24698897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
130-254
               

               
Cow position:
               
chr28:2090564-2090689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr28:8656130-8655967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
136-321
               

               
Cow position:
               
chr28:21118715-21118902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 177
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chr28:3759031-3759212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chr28:9639692-9639866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
138-315
               

               
Cow position:
               
chr28:29500441-29500624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr28:16200702-16200522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chr28:6301122-6301302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 174
               

               
Conread position:
               
139-316
               

               
Cow position:
               
chr28:34830196-34830372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
141-317
               

               
Cow position:
               
chr28:3311181-3311001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
145-302
               

               
Cow position:
               
chr28:32284192-32284036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr28:21263209-21263357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
151-326
               

               
Cow position:
               
chr28:24767458-24767637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
158-299
               

               
Cow position:
               
chr28:22278571-22278424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
169-282
               

               
Cow position:
               
chr28:8141728-8141842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
169-302
               

               
Cow position:
               
chr28:8165143-8165009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
171-308
               

               
Cow position:
               
chr28:6124186-6124050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
178-302
               

               
Cow position:
               
chr28:16964885-16964760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
188-308
               

               
Cow position:
               
chr28:27941690-27941571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               
Show alignments to all cow chromosomes.