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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01H050087.5
        

               
Conread position:
               
1-156
               

               
Cow position:
               
chr5:32140790-32140628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr5:56443204-56443355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr5:41951170-41951008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr5:3668820-3668989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr5:65601381-65601559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr5:31481065-31481258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr5:32696903-32696713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr5:56635819-56636013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr5:65883855-65883651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr5:19813297-19813090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr5:27419804-27419590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr5:35785057-35784850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr5:57737028-57737239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr5:3639568-3639354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr5:37808751-37808520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr5:47323383-47323605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr5:57101856-57101635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr5:41293999-41294232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr5:35125971-35126208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr5:45273582-45273349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr5:21040055-21039827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr5:39258440-39258658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
169, 48
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr5:23678784-23678546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr5:44752393-44752150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr5:58446721-58446963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr5:14473495-14473245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr5:8162902-8162660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 225
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr5:36255339-36255098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:3204755-3204987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:4032074-4031825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:63987527-63987288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:1087278-1087044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:26477094-26476856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:30949998-30949751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:34887276-34887031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:54767991-54767747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:55019213-55019455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:59873173-59872918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:51935110-51935355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr5:34528480-34528721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr5:41713220-41713495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr5:35826521-35826808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 210
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr5:26097214-26097502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr5:33414491-33414196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr5:65765207-65764916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr5:29353210-29352919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr5:64697704-64698001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr5:44054117-44053832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr5:64137172-64137472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr5:6503959-6503660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr5:57327715-57328016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:20127974-20128275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:65776464-65776156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr5:13717649-13717338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr5:29827967-29828270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr5:35229212-35228921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:12761194-12760896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:39447612-39447301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:16893854-16893553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:55756507-55756188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:7057482-7057171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:12901835-12902145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:14550663-14550356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:15479044-15479355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:43402818-43403135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 209
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:45845774-45845464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 239
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:49474627-49474328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:50575703-50575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:54048432-54048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:71015962-71015659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr5:26370617-26370916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr5:40889363-40889064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:59010-58697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:3281756-3282069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:12149463-12149783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:32153394-32153079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:35459378-35459064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:36868658-36868970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 165
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:45409244-45409557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:52126696-52127004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:61999621-61999324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:64555451-64555763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr5:65941332-65941016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 202
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr5:5855786-5856095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr5:18898897-18899191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr5:27179583-27179900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr5:32394519-32394837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr5:32975633-32975321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr5:53855616-53855958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr5:18289048-18289360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr5:51053730-51053406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr5:60210209-60209904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
169, 35
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr5:66581883-66582210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr5:1987538-1987862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 245
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr5:21828784-21829105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 224
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr5:57527000-57526687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr5:57768064-57767747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr5:16025539-16025236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr5:33560815-33560492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr5:35247191-35246863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr5:35969460-35969788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr5:59384772-59384440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr5:6839156-6838830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr5:24349026-24349362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr5:62172334-62172662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr5:58144683-58144333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr5:59873486-59873143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr5:16938089-16937758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr5:7723591-7723804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr5:28248098-28248362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr5:69461253-69461541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 228
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:7012924-7012624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:19335865-19335551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:36650469-36650781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr5:5938245-5938562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr5:26262754-26262452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr5:49685351-49685026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr5:57561440-57561638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr5:38076560-38076340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr5:9090100-9089866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr5:61809762-61809513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr5:46684025-46683762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr5:34050036-34050320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr5:30845033-30845321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr5:12673542-12673262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
167, 83
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr5:47317051-47316750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr5:14904146-14903838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 265
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr5:47871123-47870828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr5:30406134-30406446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr5:37255408-37255101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr5:53055638-53055326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
3-316
               

               
Cow position:
               
chr5:42845673-42845358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr5:46681793-46681482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr5:55068631-55068940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr5:61914490-61914824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr5:56014654-56014990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr5:19752226-19752527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr5:59082268-59081951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr5:18574095-18574431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr5:67212284-67212512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 191
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr5:26094238-26093991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
7-302
               

               
Cow position:
               
chr5:34624886-34625174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr5:57756107-57755795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr5:872972-873282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
8-210
               

               
Cow position:
               
chr5:6528608-6528821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
9-139
               

               
Cow position:
               
chr5:54404961-54404827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr5:53710760-53710528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr5:56680179-56680424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr5:11540117-11539829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr5:34109127-34108845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr5:63114546-63114236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr5:37090711-37090406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr5:30092695-30092393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 202
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr5:57371728-57372044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
12-183
               

               
Cow position:
               
chr5:58356893-58356716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
12-312
               

               
Cow position:
               
chr5:50924210-50924511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
14-309
               

               
Cow position:
               
chr5:33032111-33032401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
15-307
               

               
Cow position:
               
chr5:60952593-60952893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr5:53835653-53835945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
16-302
               

               
Cow position:
               
chr5:27102856-27102587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 148
               

               
Conread position:
               
16-315
               

               
Cow position:
               
chr5:11427295-11426995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr5:75436948-75436751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr5:53946834-53947111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr5:52729077-52728779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
17-316
               

               
Cow position:
               
chr5:74858512-74858828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 272
               

               
Conread position:
               
17-335
               

               
Cow position:
               
chr5:44446929-44446616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 209
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr5:46080195-46079930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
18-303
               

               
Cow position:
               
chr5:46023117-46022831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
18-303
               

               
Cow position:
               
chr5:46129721-46129440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
19-236
               

               
Cow position:
               
chr5:45420192-45419975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr5:61829925-61829699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr5:19523843-19524067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
19-264
               

               
Cow position:
               
chr5:68872137-68872383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr5:30178564-30178276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr5:34976901-34976613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr5:45225882-45225593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr5:61576487-61576779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
19-312
               

               
Cow position:
               
chr5:12557349-12557052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
19-356
               

               
Cow position:
               
chr5:22738051-22738379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr5:55928884-55929067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr5:1461030-1461220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
20-209
               

               
Cow position:
               
chr5:52000165-52000353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
20-210
               

               
Cow position:
               
chr5:58856047-58856238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
20-213
               

               
Cow position:
               
chr5:23529337-23529144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr5:72564705-72564908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 180
               

               
Conread position:
               
20-227
               

               
Cow position:
               
chr5:43992265-43992477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
20-230
               

               
Cow position:
               
chr5:64758828-64758613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 194
               

               
Conread position:
               
20-258
               

               
Cow position:
               
chr5:63627582-63627353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
20-277
               

               
Cow position:
               
chr5:47704183-47703924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr5:57419848-57419590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr5:63234883-63234615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
20-288
               

               
Cow position:
               
chr5:50482921-50482646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
20-289
               

               
Cow position:
               
chr5:37646017-37646288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr5:57156371-57156085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr5:64168294-64168017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
20-296
               

               
Cow position:
               
chr5:55955850-55956130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
20-296
               

               
Cow position:
               
chr5:67932521-67932246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chr5:14314468-14314740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chr5:30253684-30253964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chr5:61455788-61456071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
20-301
               

               
Cow position:
               
chr5:3771791-3772067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:7044764-7044480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:11769211-11769498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:20843457-20843172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 219
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:21617400-21617681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 198
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:28224397-28224668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:30302836-30303107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:43604086-43604365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr5:44049644-44049926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr5:17999549-17999264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr5:37893276-37893576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr5:43371252-43370961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr5:44848077-44847795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
20-309
               

               
Cow position:
               
chr5:24996280-24995988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
20-309
               

               
Cow position:
               
chr5:55966936-55966642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
20-309
               

               
Cow position:
               
chr5:59627031-59626739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 200
               

               
Conread position:
               
20-311
               

               
Cow position:
               
chr5:29097310-29097597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr5:46512820-46512533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
150, 34
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr5:60016110-60016399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr5:11668242-11667944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr5:41165029-41165322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 199
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr5:57074390-57074098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr5:35208206-35208505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr5:42064146-42064449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr5:49919866-49920165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr5:52667974-52668279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 137
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr5:4280391-4280686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr5:17371760-17371450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr5:64523923-64523657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 196
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr5:14345151-14344855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 93
               

               
Conread position:
               
23-231
               

               
Cow position:
               
chr5:36838908-36839116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
23-320
               

               
Cow position:
               
chr5:48867805-48867502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
23-331
               

               
Cow position:
               
chr5:20995149-20994832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 243
               

               
Conread position:
               
24-172
               

               
Cow position:
               
chr5:9390492-9390649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr5:34463637-34463436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr5:37190148-37189946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr5:63427060-63426852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr5:458438-458640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr5:48945314-48945100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
24-231
               

               
Cow position:
               
chr5:54350416-54350204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr5:37646599-37646376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
24-251
               

               
Cow position:
               
chr5:57787753-57787983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
24-263
               

               
Cow position:
               
chr5:30805115-30805345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr5:71845970-71845706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
24-298
               

               
Cow position:
               
chr5:16214631-16214903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
24-300
               

               
Cow position:
               
chr5:40109438-40109708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
24-300
               

               
Cow position:
               
chr5:49668425-49668707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:31217112-31216827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:31475631-31475910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:40152425-40152713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:47756722-47756998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:52831413-52831704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:61912365-61912066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr5:63647527-63647251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr5:63240923-63241211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr5:66972375-66972665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr5:56070803-56071094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr5:44796784-44796495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr5:50857883-50858177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr5:72903282-72903000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
24-317
               

               
Cow position:
               
chr5:37941842-37941567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
24-333
               

               
Cow position:
               
chr5:1247210-1247519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
24-351
               

               
Cow position:
               
chr5:61771061-61771396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
25-195
               

               
Cow position:
               
chr5:52645131-52644959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
25-213
               

               
Cow position:
               
chr5:39875073-39875263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
25-279
               

               
Cow position:
               
chr5:57265957-57265699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
25-303
               

               
Cow position:
               
chr5:43390979-43391253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chr5:62142623-62142812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
26-214
               

               
Cow position:
               
chr5:28035690-28035882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
26-228
               

               
Cow position:
               
chr5:54311284-54311490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
26-308
               

               
Cow position:
               
chr5:30418923-30419206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
28-302
               

               
Cow position:
               
chr5:41935702-41935429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
28-322
               

               
Cow position:
               
chr5:45404992-45405293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr5:57994915-57994660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
29-302
               

               
Cow position:
               
chr5:15470884-15471144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
29-365
               

               
Cow position:
               
chr5:65140244-65140588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
30-149
               

               
Cow position:
               
chr5:12566787-12566668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
30-286
               

               
Cow position:
               
chr5:58555093-58555366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr5:6444198-6443905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
31-179
               

               
Cow position:
               
chr5:29371442-29371594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
32-203
               

               
Cow position:
               
chr5:453514-453686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
32-236
               

               
Cow position:
               
chr5:55061880-55062088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
32-321
               

               
Cow position:
               
chr5:33833999-33834285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr5:41981327-41981530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr5:17835201-17834926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
38-291
               

               
Cow position:
               
chr5:61007030-61007279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr5:2851550-2851729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
39-278
               

               
Cow position:
               
chr5:55796003-55795768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
39-296
               

               
Cow position:
               
chr5:61784766-61784505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
39-326
               

               
Cow position:
               
chr5:29144227-29143938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 96
               

               
Conread position:
               
40-312
               

               
Cow position:
               
chr5:2309590-2309324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
43-308
               

               
Cow position:
               
chr5:23208924-23209192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 202
               

               
Conread position:
               
48-309
               

               
Cow position:
               
chr5:54875726-54875460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
49-213
               

               
Cow position:
               
chr5:46322823-46322664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr5:60741219-60741457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
51-228
               

               
Cow position:
               
chr5:57230363-57230183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-277
               

               
Cow position:
               
chr5:57686764-57686540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr5:23912225-23911992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-286
               

               
Cow position:
               
chr5:49501848-49501608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr5:30629182-30628927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr5:49342074-49341809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-302
               

               
Cow position:
               
chr5:65883651-65883397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr5:270125-269866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
51-312
               

               
Cow position:
               
chr5:26549165-26548907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
51-316
               

               
Cow position:
               
chr5:33273667-33273937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
51-317
               

               
Cow position:
               
chr5:2827350-2827615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr5:57101549-57101284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
51-319
               

               
Cow position:
               
chr5:30232882-30233152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
51-320
               

               
Cow position:
               
chr5:42050527-42050785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr5:69099695-69099964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
52-332
               

               
Cow position:
               
chr5:45187142-45186858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
53-308
               

               
Cow position:
               
chr5:37266065-37265806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
54-205
               

               
Cow position:
               
chr5:43844685-43844532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
56-302
               

               
Cow position:
               
chr5:34347747-34347507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
56-321
               

               
Cow position:
               
chr5:50101396-50101134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 178
               

               
Conread position:
               
57-235
               

               
Cow position:
               
chr5:57150644-57150828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
57-298
               

               
Cow position:
               
chr5:69383238-69383473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr5:5760332-5760077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
130, 113
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr5:56287519-56287352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
58-298
               

               
Cow position:
               
chr5:51065514-51065737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr5:12873733-12873977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr5:19860261-19860003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr5:37713671-37713445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
59-288
               

               
Cow position:
               
chr5:35397488-35397716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 130
               

               
Conread position:
               
59-307
               

               
Cow position:
               
chr5:67679162-67679412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
60-253
               

               
Cow position:
               
chr5:57655901-57655710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 54
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr5:40097581-40097829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
62-290
               

               
Cow position:
               
chr5:59330755-59330525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
63-317
               

               
Cow position:
               
chr5:50824579-50824828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
64-217
               

               
Cow position:
               
chr5:29771518-29771671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
64-269
               

               
Cow position:
               
chr5:59057750-59057551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
64-311
               

               
Cow position:
               
chr5:43846385-43846140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
65-311
               

               
Cow position:
               
chr5:11562735-11562492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 148
               

               
Conread position:
               
66-233
               

               
Cow position:
               
chr5:49452483-49452649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 128
               

               
Conread position:
               
67-256
               

               
Cow position:
               
chr5:7770894-7771090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
67-288
               

               
Cow position:
               
chr5:30153042-30152823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
67-298
               

               
Cow position:
               
chr5:4267660-4267882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr5:6126830-6127054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
68-291
               

               
Cow position:
               
chr5:22091778-22091545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 216
               

               
Conread position:
               
68-331
               

               
Cow position:
               
chr5:4768643-4768907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
69-178
               

               
Cow position:
               
chr5:14742209-14742317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr5:27293890-27293731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr5:50215566-50215413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr5:57489951-57489800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
69-282
               

               
Cow position:
               
chr5:57279377-57279592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
69-299
               

               
Cow position:
               
chr5:55259402-55259631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
69-302
               

               
Cow position:
               
chr5:17104848-17105071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 5
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr5:28330351-28330109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
69-312
               

               
Cow position:
               
chr5:39937110-39937352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
69-315
               

               
Cow position:
               
chr5:56613570-56613322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
69-343
               

               
Cow position:
               
chr5:18702227-18701955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 119
               

               
Conread position:
               
70-212
               

               
Cow position:
               
chr5:50526257-50526400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
70-213
               

               
Cow position:
               
chr5:38717304-38717448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
70-231
               

               
Cow position:
               
chr5:9369278-9369114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
70-255
               

               
Cow position:
               
chr5:3589027-3589208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
70-292
               

               
Cow position:
               
chr5:48867470-48867254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr5:29468287-29468048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 169
               

               
Conread position:
               
71-206
               

               
Cow position:
               
chr5:20595461-20595597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr5:12247742-12247583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
71-236
               

               
Cow position:
               
chr5:55129339-55129505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr5:61492089-61492286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
71-286
               

               
Cow position:
               
chr5:35513210-35513431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
71-297
               

               
Cow position:
               
chr5:56860441-56860664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
71-297
               

               
Cow position:
               
chr5:56977446-56977222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 210
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr5:56060075-56059838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr5:73168016-73167787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
71-307
               

               
Cow position:
               
chr5:15115899-15116138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
71-312
               

               
Cow position:
               
chr5:55965899-55965656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr5:12299906-12300153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
99, 137
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr5:35989752-35990004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
71-337
               

               
Cow position:
               
chr5:60515033-60514762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
72-204
               

               
Cow position:
               
chr5:19251575-19251710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
72-234
               

               
Cow position:
               
chr5:24946237-24946402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
72-236
               

               
Cow position:
               
chr5:51490250-51490085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
72-282
               

               
Cow position:
               
chr5:44344078-44344289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 90
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr5:65752857-65753068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
72-288
               

               
Cow position:
               
chr5:56011124-56011341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 174
               

               
Conread position:
               
72-288
               

               
Cow position:
               
chr5:65552711-65552509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 6
               

               
Conread position:
               
72-297
               

               
Cow position:
               
chr5:72045677-72045456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr5:55783954-55783735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr5:2423290-2423057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr5:19796971-19797218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr5:52040327-52040085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
72-310
               

               
Cow position:
               
chr5:52852968-52853201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
72-311
               

               
Cow position:
               
chr5:52108272-52108023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 107
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr5:70678647-70678403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
73-236
               

               
Cow position:
               
chr5:44726336-44726171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
73-241
               

               
Cow position:
               
chr5:6033433-6033603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
73-255
               

               
Cow position:
               
chr5:11289395-11289209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
73-276
               

               
Cow position:
               
chr5:17384153-17383954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr5:54750812-54751037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr5:4226344-4226587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 128
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr5:5089723-5089492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr5:39035777-39036021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr5:50723043-50723288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
73-334
               

               
Cow position:
               
chr5:30247524-30247267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
74-205
               

               
Cow position:
               
chr5:63656476-63656607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
74-262
               

               
Cow position:
               
chr5:65679971-65679787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
74-264
               

               
Cow position:
               
chr5:50871811-50872009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
74-288
               

               
Cow position:
               
chr5:69751388-69751173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
74-289
               

               
Cow position:
               
chr5:45706033-45706249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 43
               

               
Conread position:
               
74-291
               

               
Cow position:
               
chr5:16939596-16939376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-291
               

               
Cow position:
               
chr5:17555033-17554820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
74-297
               

               
Cow position:
               
chr5:25020769-25020535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
74-298
               

               
Cow position:
               
chr5:60523732-60523949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
74-300
               

               
Cow position:
               
chr5:69337818-69338038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 155
               

               
Conread position:
               
74-301
               

               
Cow position:
               
chr5:70750187-70749961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr5:2469208-2468987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr5:29903525-29903317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr5:44028756-44028526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr5:51298714-51298489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr5:51555083-51554859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr5:5201899-5202134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr5:38853346-38853582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr5:15364268-15364503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr5:26133099-26132863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr5:34505928-34505692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr5:58215954-58216186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 190
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr5:57062531-57062292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 138
               

               
Conread position:
               
74-313
               

               
Cow position:
               
chr5:50713765-50713512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr5:30561930-30562166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 158
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr5:58519418-58519173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 199
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr5:65760531-65760292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr5:67634518-67634267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
74-321
               

               
Cow position:
               
chr5:31469595-31469345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr5:6520010-6520264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr5:22608643-22608863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
75-308
               

               
Cow position:
               
chr5:58737759-58737524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
76-228
               

               
Cow position:
               
chr5:17724217-17724063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
76-288
               

               
Cow position:
               
chr5:52723577-52723787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
76-301
               

               
Cow position:
               
chr5:44810239-44810012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
76-302
               

               
Cow position:
               
chr5:3582560-3582781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr5:5751609-5751372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr5:26497677-26497456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr5:60422970-60422738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 197
               

               
Conread position:
               
76-341
               

               
Cow position:
               
chr5:51920289-51920555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
77-224
               

               
Cow position:
               
chr5:40356844-40356708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr5:44163368-44163151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
77-302
               

               
Cow position:
               
chr5:1104878-1104649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr5:20394336-20394569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 6
               

               
Conread position:
               
77-315
               

               
Cow position:
               
chr5:61049333-61049574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
77-317
               

               
Cow position:
               
chr5:17566437-17566202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
77-318
               

               
Cow position:
               
chr5:52137936-52138180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
78-263
               

               
Cow position:
               
chr5:56428309-56428126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
78-301
               

               
Cow position:
               
chr5:55948367-55948601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
78-301
               

               
Cow position:
               
chr5:61580288-61580505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
78-302
               

               
Cow position:
               
chr5:36142990-36143204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr5:64798876-64798649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 157
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr5:69033218-69032991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 90
               

               
Conread position:
               
78-331
               

               
Cow position:
               
chr5:63187881-63187620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
81-308
               

               
Cow position:
               
chr5:5016434-5016655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
82-236
               

               
Cow position:
               
chr5:28230168-28230326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
82-302
               

               
Cow position:
               
chr5:5257282-5257061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 143
               

               
Conread position:
               
82-308
               

               
Cow position:
               
chr5:52137048-52136819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
82-324
               

               
Cow position:
               
chr5:43858413-43858170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
82-326
               

               
Cow position:
               
chr5:59627106-59627342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 139
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr5:26723455-26723599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
83-228
               

               
Cow position:
               
chr5:56361803-56361947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
83-291
               

               
Cow position:
               
chr5:7409959-7410161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
83-300
               

               
Cow position:
               
chr5:53935540-53935330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
83-302
               

               
Cow position:
               
chr5:60948140-60948358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
83-307
               

               
Cow position:
               
chr5:44673703-44673936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
83-316
               

               
Cow position:
               
chr5:17828472-17828237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
84-260
               

               
Cow position:
               
chr5:25730488-25730674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
84-294
               

               
Cow position:
               
chr5:59395664-59395882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
84-299
               

               
Cow position:
               
chr5:18062311-18062087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
84-300
               

               
Cow position:
               
chr5:37983170-37983395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
84-301
               

               
Cow position:
               
chr5:61132903-61132673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr5:58437249-58437473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
84-307
               

               
Cow position:
               
chr5:67672231-67672462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr5:29970713-29970949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr5:56549372-56549604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
84-316
               

               
Cow position:
               
chr5:62811832-62812067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr5:29829887-29829642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
84-337
               

               
Cow position:
               
chr5:25366107-25366358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
85-288
               

               
Cow position:
               
chr5:39146974-39146769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
85-303
               

               
Cow position:
               
chr5:30276699-30276914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
85-311
               

               
Cow position:
               
chr5:29681107-29681328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
85-314
               

               
Cow position:
               
chr5:25035245-25035016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
86-288
               

               
Cow position:
               
chr5:3743332-3743538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
87-300
               

               
Cow position:
               
chr5:66659520-66659738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
87-301
               

               
Cow position:
               
chr5:19278695-19278478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
87-302
               

               
Cow position:
               
chr5:56548583-56548792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr5:7177162-7177386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
83, 142
               

               
Conread position:
               
87-311
               

               
Cow position:
               
chr5:22565630-22565854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 156
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr5:64060457-64060687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
83, 131
               

               
Conread position:
               
88-232
               

               
Cow position:
               
chr5:38739391-38739245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr5:55942367-55942162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 181
               

               
Conread position:
               
88-302
               

               
Cow position:
               
chr5:71158269-71158055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr5:24615335-24615113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr5:28681505-28681284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr5:4120037-4120275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-363
               

               
Cow position:
               
chr5:57393292-57393018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
82, 94
               

               
Conread position:
               
89-302
               

               
Cow position:
               
chr5:2240976-2240763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
90-302
               

               
Cow position:
               
chr5:3492194-3492411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 187
               

               
Conread position:
               
90-320
               

               
Cow position:
               
chr5:44196915-44196687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
91-285
               

               
Cow position:
               
chr5:25597848-25598038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
91-291
               

               
Cow position:
               
chr5:47743643-47743836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
91-302
               

               
Cow position:
               
chr5:6544121-6543908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
91-302
               

               
Cow position:
               
chr5:26147606-26147815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr5:52001608-52001392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
93-316
               

               
Cow position:
               
chr5:19811549-19811762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
94-302
               

               
Cow position:
               
chr5:54312619-54312825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
94-307
               

               
Cow position:
               
chr5:49407375-49407161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr5:13957042-13957259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
95-302
               

               
Cow position:
               
chr5:57687567-57687354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
95-302
               

               
Cow position:
               
chr5:57825155-57825364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr5:50943138-50942929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
96-291
               

               
Cow position:
               
chr5:6695565-6695764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
96-303
               

               
Cow position:
               
chr5:35145348-35145562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
97-284
               

               
Cow position:
               
chr5:38040543-38040360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
97-288
               

               
Cow position:
               
chr5:51233998-51233812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
97-298
               

               
Cow position:
               
chr5:18295460-18295659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 174
               

               
Conread position:
               
97-308
               

               
Cow position:
               
chr5:46063518-46063725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
98-225
               

               
Cow position:
               
chr5:38382777-38382649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
99-288
               

               
Cow position:
               
chr5:41884945-41885126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
99-298
               

               
Cow position:
               
chr5:44722489-44722291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
99-311
               

               
Cow position:
               
chr5:57497404-57497191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
100-298
               

               
Cow position:
               
chr5:50579142-50578942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
100-315
               

               
Cow position:
               
chr5:24464768-24464976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
100-316
               

               
Cow position:
               
chr5:13270993-13270773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
100-331
               

               
Cow position:
               
chr5:5808121-5808348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
101-236
               

               
Cow position:
               
chr5:42623154-42623020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
101-252
               

               
Cow position:
               
chr5:51490577-51490426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr5:9487055-9486857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr5:44312389-44312181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
101-318
               

               
Cow position:
               
chr5:31527371-31527152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
102-302
               

               
Cow position:
               
chr5:3677749-3677954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
102-307
               

               
Cow position:
               
chr5:31648446-31648646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
102-308
               

               
Cow position:
               
chr5:7898355-7898156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 142
               

               
Conread position:
               
102-308
               

               
Cow position:
               
chr5:36747056-36746851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
102-312
               

               
Cow position:
               
chr5:16185404-16185617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
102-315
               

               
Cow position:
               
chr5:20882598-20882377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
102-316
               

               
Cow position:
               
chr5:54340798-54341006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
102-317
               

               
Cow position:
               
chr5:57139973-57139752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
103-262
               

               
Cow position:
               
chr5:22422592-22422431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-279
               

               
Cow position:
               
chr5:32935772-32935948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
103-288
               

               
Cow position:
               
chr5:20812573-20812761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
103-290
               

               
Cow position:
               
chr5:30035094-30035283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-297
               

               
Cow position:
               
chr5:44734698-44734506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
103-302
               

               
Cow position:
               
chr5:63173016-63172822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr5:1005841-1005634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr5:14293618-14293410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr5:38820633-38820427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr5:68604880-68605094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
103-312
               

               
Cow position:
               
chr5:22102585-22102789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 118
               

               
Conread position:
               
104-279
               

               
Cow position:
               
chr5:54330909-54331090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr5:54753224-54753037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
104-291
               

               
Cow position:
               
chr5:16668725-16668908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr5:49821456-49821653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr5:62341056-62341252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 170
               

               
Conread position:
               
104-299
               

               
Cow position:
               
chr5:19561420-19561223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr5:43332691-43332490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
104-312
               

               
Cow position:
               
chr5:47220516-47220728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
104-315
               

               
Cow position:
               
chr5:57399224-57399012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr5:50087800-50087980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
105-298
               

               
Cow position:
               
chr5:29256678-29256486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
105-302
               

               
Cow position:
               
chr5:19079281-19079469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
105-302
               

               
Cow position:
               
chr5:54127318-54127513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 129
               

               
Conread position:
               
105-308
               

               
Cow position:
               
chr5:58756377-58756172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
105-316
               

               
Cow position:
               
chr5:24915498-24915286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
65, 207
               

               
Conread position:
               
105-325
               

               
Cow position:
               
chr5:41431643-41431419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
106-282
               

               
Cow position:
               
chr5:51125979-51125812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr5:64843941-64843724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr5:70353953-70353832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
107-288
               

               
Cow position:
               
chr5:53795056-53795233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
107-288
               

               
Cow position:
               
chr5:53980723-53980540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
107-302
               

               
Cow position:
               
chr5:56944055-56944254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
107-315
               

               
Cow position:
               
chr5:69427422-69427224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
107-321
               

               
Cow position:
               
chr5:62011714-62011929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 166
               

               
Conread position:
               
107-322
               

               
Cow position:
               
chr5:4347673-4347445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
107-322
               

               
Cow position:
               
chr5:15991608-15991400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr5:62572564-62572740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr5:5010065-5009876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr5:26894687-26894479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr5:30796940-30796739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr5:48154433-48154231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
108-312
               

               
Cow position:
               
chr5:40122578-40122371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
108-316
               

               
Cow position:
               
chr5:20126935-20127146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr5:73424649-73424427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr5:37933747-37933946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
109-310
               

               
Cow position:
               
chr5:36370312-36370508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
110-302
               

               
Cow position:
               
chr5:44901543-44901746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
110-314
               

               
Cow position:
               
chr5:62995991-62996196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 202
               

               
Conread position:
               
111-302
               

               
Cow position:
               
chr5:12562725-12562534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr5:41755950-41755758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
111-312
               

               
Cow position:
               
chr5:7676120-7675924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
111-315
               

               
Cow position:
               
chr5:71445425-71445631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr5:54980274-54980462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
112-316
               

               
Cow position:
               
chr5:64492310-64492518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
113-302
               

               
Cow position:
               
chr5:29172024-29172217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
113-311
               

               
Cow position:
               
chr5:19972967-19972767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
113-315
               

               
Cow position:
               
chr5:27084334-27084538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr5:43815781-43815569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
114-312
               

               
Cow position:
               
chr5:43611736-43611935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
114-315
               

               
Cow position:
               
chr5:30221740-30221539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr5:36205729-36205916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr5:41736221-41736408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr5:43465564-43465753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr5:72035059-72034874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
115-309
               

               
Cow position:
               
chr5:17987854-17987660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
115-316
               

               
Cow position:
               
chr5:46710621-46710823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
115-316
               

               
Cow position:
               
chr5:63068684-63068481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
115-318
               

               
Cow position:
               
chr5:46715521-46715726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
115-341
               

               
Cow position:
               
chr5:38770575-38770350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
116-298
               

               
Cow position:
               
chr5:28881652-28881460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
116-308
               

               
Cow position:
               
chr5:56433921-56434115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
116-315
               

               
Cow position:
               
chr5:6876928-6876727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr5:46755168-46755369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr5:48062077-48061868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr5:52207583-52207791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr5:2355560-2355777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
53, 152
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr5:65745724-65745556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
118-312
               

               
Cow position:
               
chr5:30492751-30492555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
120-288
               

               
Cow position:
               
chr5:7139789-7139629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr5:56327677-56327500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr5:59335814-59335999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr5:74887856-74887673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
120-307
               

               
Cow position:
               
chr5:5666778-5666592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 151
               

               
Conread position:
               
120-308
               

               
Cow position:
               
chr5:37919441-37919258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
120-308
               

               
Cow position:
               
chr5:43839955-43839765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr5:56477249-56477442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
120-322
               

               
Cow position:
               
chr5:51012043-51012249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
121-302
               

               
Cow position:
               
chr5:51800566-51800383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
121-328
               

               
Cow position:
               
chr5:1766254-1766046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
121-336
               

               
Cow position:
               
chr5:19294481-19294258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
122-265
               

               
Cow position:
               
chr5:30497543-30497686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
122-298
               

               
Cow position:
               
chr5:54404808-54404639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
122-299
               

               
Cow position:
               
chr5:41226960-41226781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
122-302
               

               
Cow position:
               
chr5:45854537-45854727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
122-302
               

               
Cow position:
               
chr5:57087017-57086836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
122-317
               

               
Cow position:
               
chr5:56525666-56525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
122-324
               

               
Cow position:
               
chr5:19972761-19972557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
122-325
               

               
Cow position:
               
chr5:69538586-69538791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
122-332
               

               
Cow position:
               
chr5:46499606-46499819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
123-272
               

               
Cow position:
               
chr5:46749780-46749628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 109
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr5:20345584-20345774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr5:38683550-38683744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 174
               

               
Conread position:
               
124-288
               

               
Cow position:
               
chr5:69682301-69682135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
124-302
               

               
Cow position:
               
chr5:14454089-14454270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
124-307
               

               
Cow position:
               
chr5:12724344-12724160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
124-308
               

               
Cow position:
               
chr5:55041257-55041444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
124-308
               

               
Cow position:
               
chr5:57556077-57556261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
125-299
               

               
Cow position:
               
chr5:42674220-42674384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr5:50421928-50421741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
126-308
               

               
Cow position:
               
chr5:19052742-19052559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
127-302
               

               
Cow position:
               
chr5:60207759-60207931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
128-302
               

               
Cow position:
               
chr5:34918398-34918569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
128-307
               

               
Cow position:
               
chr5:67950734-67950554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
128-321
               

               
Cow position:
               
chr5:58401621-58401809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr5:63940007-63939832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
130-312
               

               
Cow position:
               
chr5:41530886-41530700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
133-317
               

               
Cow position:
               
chr5:56284360-56284548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
134-322
               

               
Cow position:
               
chr5:35235631-35235442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 168
               

               
Conread position:
               
134-331
               

               
Cow position:
               
chr5:40292881-40292686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr5:59662999-59662823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
137-301
               

               
Cow position:
               
chr5:57447605-57447439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
137-302
               

               
Cow position:
               
chr5:47888670-47888504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
138-288
               

               
Cow position:
               
chr5:50525587-50525732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
138-300
               

               
Cow position:
               
chr5:718212-718373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
138-309
               

               
Cow position:
               
chr5:55749975-55749803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
138-341
               

               
Cow position:
               
chr5:15770393-15770187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
138-341
               

               
Cow position:
               
chr5:55943654-55943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr5:26149097-26149268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chr5:54713000-54712842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chr5:55949614-55949452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chr5:56643132-56643294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
141-316
               

               
Cow position:
               
chr5:25446950-25447129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
142-312
               

               
Cow position:
               
chr5:53825048-53824877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
145-328
               

               
Cow position:
               
chr5:24108991-24108803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
148-299
               

               
Cow position:
               
chr5:54555118-54554962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
149-317
               

               
Cow position:
               
chr5:12566470-12566302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
150-316
               

               
Cow position:
               
chr5:58487449-58487613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
151-317
               

               
Cow position:
               
chr5:56624442-56624274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
152-302
               

               
Cow position:
               
chr5:40740251-40740100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
153-307
               

               
Cow position:
               
chr5:61593344-61593495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr5:28660310-28660475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
157-317
               

               
Cow position:
               
chr5:52125314-52125153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
168-315
               

               
Cow position:
               
chr5:34193232-34193380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
169-302
               

               
Cow position:
               
chr5:41639502-41639368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
169-302
               

               
Cow position:
               
chr5:53554845-53554713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
174-300
               

               
Cow position:
               
chr5:50703950-50703823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr5:43434905-43434770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
186-312
               

               
Cow position:
               
chr5:13471220-13471346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
186-316
               

               
Cow position:
               
chr5:17254112-17253987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
187-302
               

               
Cow position:
               
chr5:15413209-15413324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
189-308
               

               
Cow position:
               
chr5:45337306-45337188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
189-319
               

               
Cow position:
               
chr5:37572443-37572313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
189-334
               

               
Cow position:
               
chr5:72867165-72867311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
189-344
               

               
Cow position:
               
chr5:32672720-32672567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
190-317
               

               
Cow position:
               
chr5:56578815-56578940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
191-317
               

               
Cow position:
               
chr5:56428457-56428327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
197-315
               

               
Cow position:
               
chr5:41757734-41757852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-312
               

               
Cow position:
               
chr5:18084333-18084227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               
Show alignments to all cow chromosomes.