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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01H090075.5
        

               
Conread position:
               
245-534
               

               
Cow position:
               
chr2:21410131-21410429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
250-503
               

               
Cow position:
               
chr2:50766399-50766644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
250-528
               

               
Cow position:
               
chr2:64230342-64230616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
271, 19
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr2:79138166-79138363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
252-541
               

               
Cow position:
               
chr2:55872596-55872313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
253-530
               

               
Cow position:
               
chr2:81983986-81984263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
254-512
               

               
Cow position:
               
chr2:68292691-68292948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
254-530
               

               
Cow position:
               
chr2:23854465-23854736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr2:41461292-41461482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
255-518
               

               
Cow position:
               
chr2:46227384-46227648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
199, 77
               

               
Conread position:
               
255-530
               

               
Cow position:
               
chr2:23539793-23540056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
255-530
               

               
Cow position:
               
chr2:44229769-44229512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
255-530
               

               
Cow position:
               
chr2:61137477-61137734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
255-547
               

               
Cow position:
               
chr2:276606-276879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
255-573
               

               
Cow position:
               
chr2:23271003-23270691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 43
               

               
Conread position:
               
256-429
               

               
Cow position:
               
chr2:26880011-26880180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
256-444
               

               
Cow position:
               
chr2:41954811-41954998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
256-530
               

               
Cow position:
               
chr2:46124778-46124493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
257-410
               

               
Cow position:
               
chr2:70658931-70658781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
257-447
               

               
Cow position:
               
chr2:46971047-46971240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
257-468
               

               
Cow position:
               
chr2:39237344-39237548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr2:86510569-86510355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
257-473
               

               
Cow position:
               
chr2:19394480-19394694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
257-514
               

               
Cow position:
               
chr2:12802743-12802493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
257-519
               

               
Cow position:
               
chr2:84564514-84564266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
257-530
               

               
Cow position:
               
chr2:41853494-41853207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 231
               

               
Conread position:
               
257-543
               

               
Cow position:
               
chr2:14218576-14218862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 217
               

               
Conread position:
               
257-548
               

               
Cow position:
               
chr2:50432778-50433068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 202
               

               
Conread position:
               
258-534
               

               
Cow position:
               
chr2:47403133-47403410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
259-397
               

               
Cow position:
               
chr2:8797968-8798106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
259-420
               

               
Cow position:
               
chr2:64131351-64131507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
259-423
               

               
Cow position:
               
chr2:5998876-5999039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
259-424
               

               
Cow position:
               
chr2:39223579-39223750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-436
               

               
Cow position:
               
chr2:29734753-29734924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
259-436
               

               
Cow position:
               
chr2:39564284-39564458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
259-437
               

               
Cow position:
               
chr2:9098787-9098608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
259-443
               

               
Cow position:
               
chr2:40802932-40803112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr2:13604398-13604582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr2:15250109-15250294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr2:32989838-32989657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr2:42192369-42192550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr2:61485555-61485736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-447
               

               
Cow position:
               
chr2:26102703-26102883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
259-447
               

               
Cow position:
               
chr2:62644519-62644708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
150, 40
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr2:36436135-36436324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
259-454
               

               
Cow position:
               
chr2:72407565-72407376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
259-455
               

               
Cow position:
               
chr2:13709402-13709594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
181, 31
               

               
Conread position:
               
259-455
               

               
Cow position:
               
chr2:77281950-77282142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-457
               

               
Cow position:
               
chr2:80963716-80963523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
183, 39
               

               
Conread position:
               
259-458
               

               
Cow position:
               
chr2:44482716-44482528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
259-461
               

               
Cow position:
               
chr2:80770048-80770247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
259-462
               

               
Cow position:
               
chr2:50277955-50278153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
259-465
               

               
Cow position:
               
chr2:13271488-13271285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-472
               

               
Cow position:
               
chr2:56846678-56846888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
259-478
               

               
Cow position:
               
chr2:6901709-6901926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
191, 42
               

               
Conread position:
               
259-480
               

               
Cow position:
               
chr2:67609843-67609620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
259-488
               

               
Cow position:
               
chr2:69367198-69366959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
168, 49
               

               
Conread position:
               
259-489
               

               
Cow position:
               
chr2:192536-192312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
166, 40
               

               
Conread position:
               
259-496
               

               
Cow position:
               
chr2:46383535-46383298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
214, 39
               

               
Conread position:
               
259-498
               

               
Cow position:
               
chr2:4016909-4016688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-501
               

               
Cow position:
               
chr2:68428029-68427791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-503
               

               
Cow position:
               
chr2:62200685-62200927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
259-508
               

               
Cow position:
               
chr2:82019196-82018941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
259-511
               

               
Cow position:
               
chr2:63940725-63940975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:13354606-13354855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:13856891-13856642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:26745204-26744948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:37791566-37791316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:46135143-46135402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 221
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:51098157-51097907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:69676602-69676351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr2:76340726-76340471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
259-514
               

               
Cow position:
               
chr2:36575671-36575914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
259-514
               

               
Cow position:
               
chr2:69419658-69419411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
259-514
               

               
Cow position:
               
chr2:77970547-77970783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr2:18621337-18621594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr2:29159839-29160090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-518
               

               
Cow position:
               
chr2:2094541-2094798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
259-518
               

               
Cow position:
               
chr2:64323173-64323420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr2:10320022-10319767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr2:42255366-42255614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr2:46120712-46120461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr2:74353828-74354087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:15298468-15298719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:19294522-19294774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:27337844-27337593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:39815354-39815111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:42970039-42970291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:46204447-46204704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:46614333-46614587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:47065040-47065297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:67386549-67386286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:72527889-72528147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr2:76762146-76762405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
259-521
               

               
Cow position:
               
chr2:71922158-71922409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
259-525
               

               
Cow position:
               
chr2:13062294-13062018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 228
               

               
Conread position:
               
259-525
               

               
Cow position:
               
chr2:25283043-25283303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
185, 191
               

               
Conread position:
               
259-527
               

               
Cow position:
               
chr2:40597504-40597764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
259-528
               

               
Cow position:
               
chr2:33532021-33531752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr2:16481931-16481664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr2:41622411-41622678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr2:60690809-60691074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 192
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:6038938-6039210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:13036047-13036318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
196, 43
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:15348321-15348591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:18232948-18233217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:18858215-18857962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:19137963-19137696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
43, 193
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:22677122-22677390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:26170676-26170942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:30351776-30351509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:41147797-41148068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:42183299-42183560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 196
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:45623947-45624226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
190, 38
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:52332709-52332439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:54700382-54700652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 205
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:56350989-56350717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:59397125-59396856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:67596092-67595822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 85
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:73023637-73023902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr2:74249293-74249028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
259-532
               

               
Cow position:
               
chr2:58869230-58868963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
259-532
               

               
Cow position:
               
chr2:67927865-67927595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:387844-387577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:12840113-12839830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:14710180-14709928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:24271163-24271413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:24602331-24602600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:38662759-38662497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:39228738-39229007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:43474107-43474379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:46033262-46033533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:46343212-46342951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:48635114-48634853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:49430296-49430019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:54009395-54009112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 223
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:69199386-69199126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr2:82957610-82957880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-537
               

               
Cow position:
               
chr2:28820293-28820573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
188, 31
               

               
Conread position:
               
259-537
               

               
Cow position:
               
chr2:52485044-52484763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 194
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr2:8843897-8843621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
194, 39
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr2:24596382-24596661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr2:27178587-27178850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr2:65269760-65269485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr2:76313937-76313663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-539
               

               
Cow position:
               
chr2:13369586-13369862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 19
               

               
Conread position:
               
259-539
               

               
Cow position:
               
chr2:31750036-31749763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
259-539
               

               
Cow position:
               
chr2:47090690-47090971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr2:68190711-68190442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr2:6323935-6323651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr2:24858938-24859210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr2:40410071-40410352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 229
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr2:44986391-44986120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 13
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr2:67745184-67745455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
205, 38
               

               
Conread position:
               
259-542
               

               
Cow position:
               
chr2:32264457-32264187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
259-543
               

               
Cow position:
               
chr2:41452164-41452441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
259-544
               

               
Cow position:
               
chr2:38886705-38886433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
244, 40
               

               
Conread position:
               
259-544
               

               
Cow position:
               
chr2:55278670-55278376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
113, 226
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr2:6267844-6267552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr2:13000851-13001129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
275, 38
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr2:19156253-19155973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr2:44022878-44022590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr2:69250740-69250453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr2:69780248-69779956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
260-534
               

               
Cow position:
               
chr2:65928907-65928641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
260-535
               

               
Cow position:
               
chr2:21382922-21382649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
260-537
               

               
Cow position:
               
chr2:5300517-5300800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
260-548
               

               
Cow position:
               
chr2:45485035-45484748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
261-468
               

               
Cow position:
               
chr2:27358974-27359182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
261-472
               

               
Cow position:
               
chr2:26851095-26851303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
261-472
               

               
Cow position:
               
chr2:69823520-69823730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
261-533
               

               
Cow position:
               
chr2:39663306-39663576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
261-534
               

               
Cow position:
               
chr2:37791194-37790915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
261-539
               

               
Cow position:
               
chr2:49467560-49467833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
261-543
               

               
Cow position:
               
chr2:36136945-36137220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
261-548
               

               
Cow position:
               
chr2:6231959-6231675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr2:70945336-70945505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
263-506
               

               
Cow position:
               
chr2:39281129-39281369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
263-512
               

               
Cow position:
               
chr2:51181844-51181598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
263-518
               

               
Cow position:
               
chr2:65931898-65932151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 37
               

               
Conread position:
               
263-530
               

               
Cow position:
               
chr2:51855803-51855544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
263-530
               

               
Cow position:
               
chr2:69579747-69579481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
266-437
               

               
Cow position:
               
chr2:22113765-22113591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
266-443
               

               
Cow position:
               
chr2:44232513-44232341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
266-444
               

               
Cow position:
               
chr2:16018294-16018119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
266-444
               

               
Cow position:
               
chr2:43123275-43123452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
266-444
               

               
Cow position:
               
chr2:70495210-70495381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
266-447
               

               
Cow position:
               
chr2:65890685-65890510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
266-452
               

               
Cow position:
               
chr2:73790060-73789870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
266-455
               

               
Cow position:
               
chr2:63331867-63331678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
266-458
               

               
Cow position:
               
chr2:44004893-44005082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
266-467
               

               
Cow position:
               
chr2:45439378-45439570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
266-468
               

               
Cow position:
               
chr2:30642725-30642526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
266-468
               

               
Cow position:
               
chr2:44025312-44025514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
266-470
               

               
Cow position:
               
chr2:38273482-38273689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 165
               

               
Conread position:
               
266-508
               

               
Cow position:
               
chr2:12686854-12686621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
266-513
               

               
Cow position:
               
chr2:13582519-13582762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
220, 117
               

               
Conread position:
               
266-516
               

               
Cow position:
               
chr2:13867664-13867906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
266-518
               

               
Cow position:
               
chr2:29859947-29860194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
199, 70
               

               
Conread position:
               
266-520
               

               
Cow position:
               
chr2:33988376-33988122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
176, 32
               

               
Conread position:
               
266-520
               

               
Cow position:
               
chr2:80116035-80116282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
266-524
               

               
Cow position:
               
chr2:44170495-44170746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
266-526
               

               
Cow position:
               
chr2:26500997-26500748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
266-528
               

               
Cow position:
               
chr2:33472050-33471804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:992091-992347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:17328686-17328939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:19494148-19494409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:21380459-21380209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:22042472-22042749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:44191415-44191692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
178, 162
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:44506058-44505795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:46942422-46942159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:55632715-55632966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:80275356-80275098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr2:83211033-83211294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
266-533
               

               
Cow position:
               
chr2:41462490-41462227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 187
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr2:10628599-10628333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 24
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr2:39590189-39590454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr2:46189161-46188898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr2:76110334-76110591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr2:81791634-81791367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
266-538
               

               
Cow position:
               
chr2:46119823-46119568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
266-541
               

               
Cow position:
               
chr2:47978108-47977836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
266-542
               

               
Cow position:
               
chr2:29343474-29343197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
266-542
               

               
Cow position:
               
chr2:68328915-68328644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
266-543
               

               
Cow position:
               
chr2:46242651-46242373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
266-544
               

               
Cow position:
               
chr2:56937619-56937885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
266-546
               

               
Cow position:
               
chr2:80177652-80177387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
266-548
               

               
Cow position:
               
chr2:41040774-41040494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
266-551
               

               
Cow position:
               
chr2:32660113-32660397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 24
               

               
Conread position:
               
266-581
               

               
Cow position:
               
chr2:54790220-54790524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
267-520
               

               
Cow position:
               
chr2:28711063-28710825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
267-520
               

               
Cow position:
               
chr2:40257477-40257232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
34, 183
               

               
Conread position:
               
269-461
               

               
Cow position:
               
chr2:83233835-83234024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr2:68870631-68870846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
269-530
               

               
Cow position:
               
chr2:15734351-15734614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
269-537
               

               
Cow position:
               
chr2:54967949-54968211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
270-518
               

               
Cow position:
               
chr2:32350990-32350746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
270-542
               

               
Cow position:
               
chr2:56003179-56003442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
271-455
               

               
Cow position:
               
chr2:40880011-40880192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
271-455
               

               
Cow position:
               
chr2:81388632-81388814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
271-467
               

               
Cow position:
               
chr2:44222764-44222956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
271-473
               

               
Cow position:
               
chr2:60429220-60429422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
271-474
               

               
Cow position:
               
chr2:61421226-61421024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
271-498
               

               
Cow position:
               
chr2:32048423-32048647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
186, 18
               

               
Conread position:
               
271-498
               

               
Cow position:
               
chr2:37113248-37113034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
271-511
               

               
Cow position:
               
chr2:66237141-66237375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr2:16332009-16332234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr2:62761773-62762021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr2:71437437-71437192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 19
               

               
Conread position:
               
271-523
               

               
Cow position:
               
chr2:16428459-16428214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
271-524
               

               
Cow position:
               
chr2:69350626-69350379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
29, 181
               

               
Conread position:
               
271-529
               

               
Cow position:
               
chr2:54654674-54654420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
192, 72
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr2:16839575-16839832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 203
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr2:24593813-24594056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr2:46052440-46052695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
206, 83
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr2:65036343-65036099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr2:66149272-66149510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr2:73353735-73354001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
271-533
               

               
Cow position:
               
chr2:70895975-70896246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:7524192-7523918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:41248509-41248764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:45499260-45499004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:45565646-45565900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:45596922-45597177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:46161896-46162151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr2:62247583-62247849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
271-537
               

               
Cow position:
               
chr2:4644214-4644471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
271-537
               

               
Cow position:
               
chr2:36077294-36077562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
271-538
               

               
Cow position:
               
chr2:36963466-36963724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
271-538
               

               
Cow position:
               
chr2:42608008-42608270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
271-539
               

               
Cow position:
               
chr2:28726414-28726666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
271-544
               

               
Cow position:
               
chr2:16513802-16514064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
271-544
               

               
Cow position:
               
chr2:67479915-67480196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
271-544
               

               
Cow position:
               
chr2:67576039-67576311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
271-548
               

               
Cow position:
               
chr2:43994874-43995143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
45, 183
               

               
Conread position:
               
272-468
               

               
Cow position:
               
chr2:5130512-5130316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
272-468
               

               
Cow position:
               
chr2:39263434-39263624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:38969563-38969368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:36017472-36017272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
272-479
               

               
Cow position:
               
chr2:3981834-3982034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
272-480
               

               
Cow position:
               
chr2:46055196-46054996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
272-519
               

               
Cow position:
               
chr2:48525599-48525348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
272-520
               

               
Cow position:
               
chr2:35988674-35988433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
272-520
               

               
Cow position:
               
chr2:55496346-55496109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
272-526
               

               
Cow position:
               
chr2:52596782-52596546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
272-530
               

               
Cow position:
               
chr2:71622106-71621854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
272-534
               

               
Cow position:
               
chr2:12682718-12682458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 26
               

               
Conread position:
               
272-534
               

               
Cow position:
               
chr2:39067446-39067694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
272-534
               

               
Cow position:
               
chr2:49428322-49428583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 134
               

               
Conread position:
               
272-539
               

               
Cow position:
               
chr2:10574613-10574354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
272-539
               

               
Cow position:
               
chr2:76562049-76562326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
272-545
               

               
Cow position:
               
chr2:43835618-43835350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
272-548
               

               
Cow position:
               
chr2:17940343-17940070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
272-548
               

               
Cow position:
               
chr2:50352829-50353102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
272-582
               

               
Cow position:
               
chr2:32431796-32431492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
273-447
               

               
Cow position:
               
chr2:17410060-17409891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-465
               

               
Cow position:
               
chr2:13645264-13645452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
273-469
               

               
Cow position:
               
chr2:61196688-61196877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-471
               

               
Cow position:
               
chr2:84970770-84970575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
273-510
               

               
Cow position:
               
chr2:70660323-70660090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
273-520
               

               
Cow position:
               
chr2:19502537-19502289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
273-530
               

               
Cow position:
               
chr2:2485787-2486039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
273-530
               

               
Cow position:
               
chr2:39371358-39371605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
273-530
               

               
Cow position:
               
chr2:41145256-41145513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 201
               

               
Conread position:
               
273-530
               

               
Cow position:
               
chr2:45936015-45935773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
151, 25
               

               
Conread position:
               
273-530
               

               
Cow position:
               
chr2:71800141-71799886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
273-548
               

               
Cow position:
               
chr2:70847319-70847050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
274-496
               

               
Cow position:
               
chr2:84497882-84498108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 204
               

               
Conread position:
               
274-512
               

               
Cow position:
               
chr2:43729521-43729283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 200
               

               
Conread position:
               
274-520
               

               
Cow position:
               
chr2:1317940-1317697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
274-524
               

               
Cow position:
               
chr2:14634132-14634372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr2:44051255-44051506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
274-534
               

               
Cow position:
               
chr2:80015-79762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
274-534
               

               
Cow position:
               
chr2:58135450-58135190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
274-541
               

               
Cow position:
               
chr2:22372006-22371749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
274-542
               

               
Cow position:
               
chr2:13672469-13672723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
260, 28
               

               
Conread position:
               
275-527
               

               
Cow position:
               
chr2:13013035-13013270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
275-529
               

               
Cow position:
               
chr2:26438779-26438535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
275-533
               

               
Cow position:
               
chr2:68970684-68970943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
276-498
               

               
Cow position:
               
chr2:66480241-66480028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
277-512
               

               
Cow position:
               
chr2:60616538-60616304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
164, 151
               

               
Conread position:
               
280-447
               

               
Cow position:
               
chr2:46230809-46230647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
280-469
               

               
Cow position:
               
chr2:53575341-53575534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
280-530
               

               
Cow position:
               
chr2:45478643-45478407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
280-539
               

               
Cow position:
               
chr2:15871888-15872133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
280-543
               

               
Cow position:
               
chr2:80962021-80961754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
280-548
               

               
Cow position:
               
chr2:15059111-15058850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
280-728
               

               
Cow position:
               
chr2:73129098-73129540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
281-534
               

               
Cow position:
               
chr2:29121833-29122083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
281-542
               

               
Cow position:
               
chr2:28285414-28285145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
183, 17
               

               
Conread position:
               
282-498
               

               
Cow position:
               
chr2:20900511-20900297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
282-510
               

               
Cow position:
               
chr2:50013309-50013535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
282-530
               

               
Cow position:
               
chr2:32988517-32988765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
284-530
               

               
Cow position:
               
chr2:19212100-19211866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
285-530
               

               
Cow position:
               
chr2:43960125-43960374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
285-537
               

               
Cow position:
               
chr2:57776300-57776554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
286-530
               

               
Cow position:
               
chr2:33493456-33493218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
286-534
               

               
Cow position:
               
chr2:44197837-44198079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
286-539
               

               
Cow position:
               
chr2:37347742-37347988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
287-530
               

               
Cow position:
               
chr2:21074172-21073929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 189
               

               
Conread position:
               
287-536
               

               
Cow position:
               
chr2:31355652-31355901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
287-537
               

               
Cow position:
               
chr2:34492405-34492656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 126
               

               
Conread position:
               
289-512
               

               
Cow position:
               
chr2:27128869-27128649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
289-529
               

               
Cow position:
               
chr2:78682511-78682750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
289-530
               

               
Cow position:
               
chr2:58993079-58993331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
289-534
               

               
Cow position:
               
chr2:12950207-12949965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
290-436
               

               
Cow position:
               
chr2:56072425-56072281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
290-462
               

               
Cow position:
               
chr2:27187489-27187659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
290-512
               

               
Cow position:
               
chr2:43136487-43136265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
290-530
               

               
Cow position:
               
chr2:19500125-19499886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
290-534
               

               
Cow position:
               
chr2:64292752-64292530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
291-530
               

               
Cow position:
               
chr2:13317542-13317779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
292-508
               

               
Cow position:
               
chr2:80235393-80235178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
292-529
               

               
Cow position:
               
chr2:45510601-45510356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
294-530
               

               
Cow position:
               
chr2:14349729-14349973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
296-530
               

               
Cow position:
               
chr2:28330781-28330556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
297-512
               

               
Cow position:
               
chr2:81430306-81430530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 187
               

               
Conread position:
               
297-530
               

               
Cow position:
               
chr2:23301698-23301923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
154, 53
               

               
Conread position:
               
297-543
               

               
Cow position:
               
chr2:45619423-45619189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr2:16487955-16488160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
299-527
               

               
Cow position:
               
chr2:45567290-45567068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
299-530
               

               
Cow position:
               
chr2:38837549-38837319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
299-530
               

               
Cow position:
               
chr2:44714713-44714483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
299-534
               

               
Cow position:
               
chr2:44931294-44931059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
299-538
               

               
Cow position:
               
chr2:84480535-84480296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
299-543
               

               
Cow position:
               
chr2:18997688-18997924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
300-497
               

               
Cow position:
               
chr2:23647710-23647515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
300-529
               

               
Cow position:
               
chr2:43990739-43990964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
300-530
               

               
Cow position:
               
chr2:9767471-9767236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 179
               

               
Conread position:
               
301-513
               

               
Cow position:
               
chr2:50565904-50566115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
301-518
               

               
Cow position:
               
chr2:63182807-63183019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr2:76861486-76861266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
301-528
               

               
Cow position:
               
chr2:21644480-21644255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
301-529
               

               
Cow position:
               
chr2:8575973-8576193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
301-530
               

               
Cow position:
               
chr2:14826246-14826474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
301-530
               

               
Cow position:
               
chr2:30179942-30179715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
301-530
               

               
Cow position:
               
chr2:55060422-55060189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
301-534
               

               
Cow position:
               
chr2:40411205-40410975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
301-538
               

               
Cow position:
               
chr2:46202232-46202470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 128
               

               
Conread position:
               
301-541
               

               
Cow position:
               
chr2:75227171-75227410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
302-457
               

               
Cow position:
               
chr2:50367942-50368097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-468
               

               
Cow position:
               
chr2:28303290-28303458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr2:41157941-41158129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
302-507
               

               
Cow position:
               
chr2:54835943-54836150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr2:45505777-45505986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr2:72630421-72630630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
302-514
               

               
Cow position:
               
chr2:2827714-2827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
302-517
               

               
Cow position:
               
chr2:68064537-68064751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
302-518
               

               
Cow position:
               
chr2:37973361-37973141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 174
               

               
Conread position:
               
302-518
               

               
Cow position:
               
chr2:60910161-60910366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
302-518
               

               
Cow position:
               
chr2:73637202-73636987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
302-519
               

               
Cow position:
               
chr2:20791462-20791239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
302-519
               

               
Cow position:
               
chr2:61480559-61480775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
302-520
               

               
Cow position:
               
chr2:16669439-16669655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
302-520
               

               
Cow position:
               
chr2:38651485-38651691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
302-529
               

               
Cow position:
               
chr2:43131064-43131292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 173
               

               
Conread position:
               
302-530
               

               
Cow position:
               
chr2:65587128-65587351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
302-530
               

               
Cow position:
               
chr2:79837756-79837528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
302-532
               

               
Cow position:
               
chr2:65830369-65830141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr2:28000418-28000197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr2:33251118-33250889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr2:37121235-37121454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr2:46164529-46164303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr2:55662332-55662098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr2:64773356-64773601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
147, 196
               

               
Conread position:
               
302-539
               

               
Cow position:
               
chr2:11573773-11574017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 184
               

               
Conread position:
               
302-540
               

               
Cow position:
               
chr2:16071431-16071196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
229, 154
               

               
Conread position:
               
302-540
               

               
Cow position:
               
chr2:17842017-17841788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
199, 107
               

               
Conread position:
               
302-541
               

               
Cow position:
               
chr2:6304321-6304080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 177
               

               
Conread position:
               
302-542
               

               
Cow position:
               
chr2:40296492-40296250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
302-542
               

               
Cow position:
               
chr2:82116061-82116293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
302-543
               

               
Cow position:
               
chr2:44620557-44620796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
302-546
               

               
Cow position:
               
chr2:41915453-41915217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
302-546
               

               
Cow position:
               
chr2:46351811-46351572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
303-473
               

               
Cow position:
               
chr2:24117135-24116975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr2:26806141-26805946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 59
               

               
Conread position:
               
303-512
               

               
Cow position:
               
chr2:1745749-1745540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
303-519
               

               
Cow position:
               
chr2:47047783-47047570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr2:40728322-40728544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
303-526
               

               
Cow position:
               
chr2:41007569-41007352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 145
               

               
Conread position:
               
303-529
               

               
Cow position:
               
chr2:10505641-10505418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
303-529
               

               
Cow position:
               
chr2:29681810-29682034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
303-529
               

               
Cow position:
               
chr2:33496643-33496414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 82
               

               
Conread position:
               
303-530
               

               
Cow position:
               
chr2:16890081-16889862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
303-530
               

               
Cow position:
               
chr2:32087845-32088075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
303-530
               

               
Cow position:
               
chr2:60368288-60368528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
303-530
               

               
Cow position:
               
chr2:71486750-71486970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
303-532
               

               
Cow position:
               
chr2:71600395-71600624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 171
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr2:9726126-9725901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr2:19319975-19320199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr2:39566723-39566497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr2:63051204-63050976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr2:80882853-80882630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
303-538
               

               
Cow position:
               
chr2:80242212-80241979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
303-540
               

               
Cow position:
               
chr2:45138463-45138238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
303-540
               

               
Cow position:
               
chr2:66959647-66959883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
303-545
               

               
Cow position:
               
chr2:45542427-45542197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
304-462
               

               
Cow position:
               
chr2:39660113-39659955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr2:15219086-15219281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 171
               

               
Conread position:
               
304-519
               

               
Cow position:
               
chr2:57565362-57565150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 71
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr2:1422324-1422536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr2:17492543-17492334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
304-529
               

               
Cow position:
               
chr2:42365003-42365237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 175
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr2:6311225-6311445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr2:7194184-7194403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr2:30012790-30012566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr2:33497231-33497006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr2:50914039-50913820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr2:69109376-69109150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
190, 173
               

               
Conread position:
               
304-533
               

               
Cow position:
               
chr2:13580209-13580434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 121
               

               
Conread position:
               
304-533
               

               
Cow position:
               
chr2:46521737-46521973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
304-534
               

               
Cow position:
               
chr2:32488685-32488471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
195, 39
               

               
Conread position:
               
304-534
               

               
Cow position:
               
chr2:72003972-72003750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
304-539
               

               
Cow position:
               
chr2:35664679-35664916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 177
               

               
Conread position:
               
304-539
               

               
Cow position:
               
chr2:38640295-38640522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
304-540
               

               
Cow position:
               
chr2:37614915-37615149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
304-543
               

               
Cow position:
               
chr2:38953796-38954041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
137, 176
               

               
Conread position:
               
304-545
               

               
Cow position:
               
chr2:29290340-29290108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
305-452
               

               
Cow position:
               
chr2:82262402-82262254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
305-479
               

               
Cow position:
               
chr2:70915690-70915513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr2:38795788-38795587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr2:70908351-70908148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr2:78360383-78360595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 161
               

               
Conread position:
               
305-529
               

               
Cow position:
               
chr2:49717114-49716892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
305-530
               

               
Cow position:
               
chr2:42979007-42978782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 175
               

               
Conread position:
               
305-530
               

               
Cow position:
               
chr2:46053445-46053668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
305-539
               

               
Cow position:
               
chr2:29928035-29928266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-548
               

               
Cow position:
               
chr2:81921732-81921967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
306-456
               

               
Cow position:
               
chr2:59974663-59974514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
306-497
               

               
Cow position:
               
chr2:24722296-24722106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr2:53430694-53430882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
306-516
               

               
Cow position:
               
chr2:31673235-31673446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 168
               

               
Conread position:
               
306-520
               

               
Cow position:
               
chr2:46230349-46230138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 77
               

               
Conread position:
               
306-530
               

               
Cow position:
               
chr2:81480825-81481040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
306-542
               

               
Cow position:
               
chr2:24218241-24218010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr2:30161920-30161677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
307-471
               

               
Cow position:
               
chr2:25757651-25757487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
307-510
               

               
Cow position:
               
chr2:52466472-52466274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
307-534
               

               
Cow position:
               
chr2:14847842-14848047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
307-539
               

               
Cow position:
               
chr2:49862630-49862860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
307-545
               

               
Cow position:
               
chr2:40703690-40703461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 120
               

               
Conread position:
               
308-469
               

               
Cow position:
               
chr2:43907211-43907051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
308-530
               

               
Cow position:
               
chr2:39362978-39363204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
9, 170
               

               
Conread position:
               
308-540
               

               
Cow position:
               
chr2:57802512-57802277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 196
               

               
Conread position:
               
308-541
               

               
Cow position:
               
chr2:19058130-19058360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr2:18236264-18236025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr2:31783907-31784141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr2:54052262-54052021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr2:83157105-83157344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
228, 133
               

               
Conread position:
               
309-514
               

               
Cow position:
               
chr2:39095334-39095536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
309-517
               

               
Cow position:
               
chr2:39350515-39350307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
309-530
               

               
Cow position:
               
chr2:22370965-22370753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
309-546
               

               
Cow position:
               
chr2:11350158-11349920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
222, 164
               

               
Conread position:
               
310-529
               

               
Cow position:
               
chr2:56837677-56837458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
310-530
               

               
Cow position:
               
chr2:23712850-23713069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
311-534
               

               
Cow position:
               
chr2:5113817-5114045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
312-509
               

               
Cow position:
               
chr2:46014747-46014943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
132, 138
               

               
Conread position:
               
312-519
               

               
Cow position:
               
chr2:46126154-46125955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
312-520
               

               
Cow position:
               
chr2:86541171-86540969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
312-530
               

               
Cow position:
               
chr2:39334680-39334463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
312-534
               

               
Cow position:
               
chr2:30954615-30954394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr2:67302000-67302225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               
UCSC Genome Browser

               
Conread position:
               
312-548
               

               
Cow position:
               
chr2:21049346-21049122 (view  custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               
UCSC Genome Browser

               
               
               
Conread position:
313-467

               
               
               
Cow position:
chr2:45537204-45537054 (view  custom track)

               
               
               
Alignm length:
155

               
               
               
Alignm identity:
114

               
               
               
Alignm E-value:
7e-22

               
               
               
Alignm gaps (pig, cow):
11, 0
UCSC Genome Browser

               
               
               
Conread position:
313-482

               
               
               
Cow position:
chr2:50818970-50818800 (view  custom track)

               
               
               
Alignm length:
172

               
               
               
Alignm identity:
126

               
               
               
Alignm E-value:
1e-25

               
               
               
Alignm gaps (pig, cow):
56, 162

               
               
               Conread position:313-530
               
               
               Cow position:chr2:52345982-52345767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):133, 0

               
               
               Conread position:313-549
               
               
               Cow position:chr2:78256276-78256505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:158
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):213, 23

               
               
               Conread position:313-551
               
               
               Cow position:chr2:24126620-24126861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):42, 136

               
               
               Conread position:315-530
               
               
               Cow position:chr2:16847168-16847379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):29, 53

               
               
               Conread position:316-524
               
               
               Cow position:chr2:57027668-57027866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):5, 32

               
               
               Conread position:316-530
               
               
               Cow position:chr2:25922395-25922606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:160
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):115, 32

               
               
               Conread position:317-542
               
               
               Cow position:chr2:12139567-12139336 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):36, 166

               
               
               Conread position:318-526
               
               
               Cow position:chr2:46316859-46317064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:154
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:319-512
               
               
               Cow position:chr2:28420480-28420671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:133
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):126, 0

               
               
               Conread position:319-512
               
               
               Cow position:chr2:79235509-79235702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):151, 161

               
               
               Conread position:319-528
               
               
               Cow position:chr2:3739857-3739649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):154, 0

               
               
               Conread position:319-530
               
               
               Cow position:chr2:37097909-37097707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:146
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:321-512
               
               
               Cow position:chr2:70826321-70826509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:321-530
               
               
               Cow position:chr2:3931734-3931535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:153
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:322-534
               
               
               Cow position:chr2:46139310-46139525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:150
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):57, 28

               
               
               Conread position:322-547
               
               
               Cow position:chr2:12873403-12873619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:324-505
               
               
               Cow position:chr2:12958405-12958587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):166, 74

               
               
               Conread position:324-512
               
               
               Cow position:chr2:58310680-58310867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):149, 0

               
               
               Conread position:324-518
               
               
               Cow position:chr2:36178699-36178509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:324-534
               
               
               Cow position:chr2:72315819-72315613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:324-538
               
               
               Cow position:chr2:23935399-23935597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:325-467
               
               
               Cow position:chr2:39419096-39418953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:105
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:325-520
               
               
               Cow position:chr2:29395015-29394821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):148, 0

               
               
               Conread position:325-530
               
               
               Cow position:chr2:9062671-9062875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):148, 0

               
               
               Conread position:325-534
               
               
               Cow position:chr2:46312434-46312635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:148
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):201, 124

               
               
               Conread position:325-534
               
               
               Cow position:chr2:80848077-80848282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:159
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:326-519
               
               
               Cow position:chr2:31017544-31017352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):147, 0

               
               
               Conread position:326-537
               
               
               Cow position:chr2:50821226-50821009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):133, 0

               
               
               Conread position:326-552
               
               
               Cow position:chr2:305720-305499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):147, 0

               
               
               Conread position:327-466
               
               
               Cow position:chr2:45380206-45380067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:102
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:327-534
               
               
               Cow position:chr2:65554808-65554603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):145, 0

               
               
               Conread position:328-528
               
               
               Cow position:chr2:11001073-11000874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):145, 0

               
               
               Conread position:328-535
               
               
               Cow position:chr2:51388988-51388782 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:139
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):145, 0

               
               
               Conread position:330-530
               
               
               Cow position:chr2:69124438-69124638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:135
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):30, 140

               
               
               Conread position:331-534
               
               
               Cow position:chr2:82374440-82374634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):116, 36

               
               
               Conread position:332-518
               
               
               Cow position:chr2:81233111-81232924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):108, 143

               
               
               Conread position:332-519
               
               
               Cow position:chr2:11217793-11217982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):118, 149

               
               
               Conread position:332-534
               
               
               Cow position:chr2:39642751-39642946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):110, 142

               
               
               Conread position:332-546
               
               
               Cow position:chr2:42476229-42476023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:333-510
               
               
               Cow position:chr2:9103257-9103433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):140, 0

               
               
               Conread position:333-534
               
               
               Cow position:chr2:53652853-53653052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:154
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:333-543
               
               
               Cow position:chr2:72342855-72342645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):151, 144

               
               
               Conread position:333-600
               
               
               Cow position:chr2:38162797-38162533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):189, 102

               
               
               Conread position:335-530
               
               
               Cow position:chr2:60182023-60181834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:335-534
               
               
               Cow position:chr2:55004291-55004482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:336-465
               
               
               Cow position:chr2:2689758-2689885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:102
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):109, 0

               
               
               Conread position:336-514
               
               
               Cow position:chr2:64473344-64473173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):104, 37

               
               
               Conread position:336-521
               
               
               Cow position:chr2:31126071-31126244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:336-530
               
               
               Cow position:chr2:56738058-56738252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):111, 95

               
               
               Conread position:336-532
               
               
               Cow position:chr2:7478936-7478736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):113, 52

               
               
               Conread position:336-534
               
               
               Cow position:chr2:16667942-16668133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:336-539
               
               
               Cow position:chr2:13468220-13468420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:336-541
               
               
               Cow position:chr2:48837283-48837084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:336-543
               
               
               Cow position:chr2:3128073-3127865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:153
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):139, 104

               
               
               Conread position:336-543
               
               
               Cow position:chr2:52379734-52379533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:337-530
               
               
               Cow position:chr2:26361760-26361953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):51, 128

               
               
               Conread position:337-534
               
               
               Cow position:chr2:55939632-55939830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):105, 38

               
               
               Conread position:337-537
               
               
               Cow position:chr2:33560666-33560472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:150
               
               
               Alignm E-value:8e-33
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:337-543
               
               
               Cow position:chr2:68582594-68582803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):178, 113

               
               
               Conread position:338-514
               
               
               Cow position:chr2:64465769-64465598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:338-530
               
               
               Cow position:chr2:26694614-26694805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):135, 0

               
               
               Conread position:338-534
               
               
               Cow position:chr2:35934887-35935088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):124, 141

               
               
               Conread position:338-539
               
               
               Cow position:chr2:19017458-19017659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):196, 140

               
               
               Conread position:338-542
               
               
               Cow position:chr2:23616347-23616142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):194, 141

               
               
               Conread position:338-548
               
               
               Cow position:chr2:28356355-28356565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):194, 135

               
               
               Conread position:339-530
               
               
               Cow position:chr2:38234084-38234273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:341-509
               
               
               Cow position:chr2:83474673-83474840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):132, 0

               
               
               Conread position:342-510
               
               
               Cow position:chr2:36117260-36117424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):131, 0

               
               
               Conread position:342-520
               
               
               Cow position:chr2:37652259-37652438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):128, 0

               
               
               Conread position:342-520
               
               
               Cow position:chr2:56102320-56102149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:130
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:342-530
               
               
               Cow position:chr2:26454643-26454456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:132
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):105, 97

               
               
               Conread position:342-534
               
               
               Cow position:chr2:2491116-2490927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):97, 44

               
               
               Conread position:342-534
               
               
               Cow position:chr2:32840601-32840422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):43, 116

               
               
               Conread position:343-506
               
               
               Cow position:chr2:18243550-18243708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:343-520
               
               
               Cow position:chr2:9476424-9476251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):22, 111

               
               
               Conread position:343-530
               
               
               Cow position:chr2:51290346-51290161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):125, 0

               
               
               Conread position:343-544
               
               
               Cow position:chr2:85794957-85794760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:343-546
               
               
               Cow position:chr2:38042842-38043045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):191, 136

               
               
               Conread position:344-519
               
               
               Cow position:chr2:45589643-45589469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):129, 0

               
               
               Conread position:344-519
               
               
               Cow position:chr2:46111040-46110861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):98, 16

               
               
               Conread position:344-530
               
               
               Cow position:chr2:59785895-59786071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:344-534
               
               
               Cow position:chr2:4343065-4343252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):105, 0

               
               
               Conread position:345-451
               
               
               Cow position:chr2:35902782-35902888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:86
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:345-530
               
               
               Cow position:chr2:485590-485770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:346-512
               
               
               Cow position:chr2:47189527-47189691 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):161, 114

               
               
               Conread position:346-534
               
               
               Cow position:chr2:2031997-2031810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):15, 101

               
               
               Conread position:346-541
               
               
               Cow position:chr2:3854611-3854415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):97, 104

               
               
               Conread position:348-534
               
               
               Cow position:chr2:41651381-41651194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):20, 131

               
               
               Conread position:349-504
               
               
               Cow position:chr2:21949993-21950143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:349-519
               
               
               Cow position:chr2:37891473-37891299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:124
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):110, 129

               
               
               Conread position:349-520
               
               
               Cow position:chr2:29041912-29042082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:349-520
               
               
               Cow position:chr2:35043979-35044152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:349-520
               
               
               Cow position:chr2:37224088-37224255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:349-530
               
               
               Cow position:chr2:49248525-49248345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):88, 79

               
               
               Conread position:349-530
               
               
               Cow position:chr2:66562023-66561843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):58, 68

               
               
               Conread position:349-530
               
               
               Cow position:chr2:81913016-81913194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:349-534
               
               
               Cow position:chr2:9936638-9936456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):98, 125

               
               
               Conread position:349-534
               
               
               Cow position:chr2:34570991-34570804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):28, 20

               
               
               Conread position:349-534
               
               
               Cow position:chr2:41351168-41350986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):147, 114

               
               
               Conread position:349-534
               
               
               Cow position:chr2:41422813-41422988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:349-540
               
               
               Cow position:chr2:44215521-44215705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:349-542
               
               
               Cow position:chr2:45522017-45521825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:349-543
               
               
               Cow position:chr2:1923867-1923674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:142
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:349-543
               
               
               Cow position:chr2:8083614-8083806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:148
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):147, 124

               
               
               Conread position:349-544
               
               
               Cow position:chr2:15972839-15973034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:137
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):89, 127

               
               
               Conread position:349-548
               
               
               Cow position:chr2:69093131-69092938 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):181, 106

               
               
               Conread position:349-548
               
               
               Cow position:chr2:78669907-78669713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):100, 32

               
               
               Conread position:350-520
               
               
               Cow position:chr2:47159966-47160133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:350-529
               
               
               Cow position:chr2:25483065-25483241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):89, 110

               
               
               Conread position:350-548
               
               
               Cow position:chr2:57454067-57454276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):44, 135

               
               
               Conread position:351-461
               
               
               Cow position:chr2:81473992-81474102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:92
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:351-535
               
               
               Cow position:chr2:82657299-82657482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):181, 72

               
               
               Conread position:351-541
               
               
               Cow position:chr2:19191811-19191614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):90, 133

               
               
               Conread position:351-545
               
               
               Cow position:chr2:1364579-1364387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:352-517
               
               
               Cow position:chr2:2437584-2437425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:130
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:352-547
               
               
               Cow position:chr2:81243932-81244126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:354-486
               
               
               Cow position:chr2:46300634-46300767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:102
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):106, 126

               
               
               Conread position:354-499
               
               
               Cow position:chr2:53575965-53575822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:354-512
               
               
               Cow position:chr2:47256946-47256789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:354-513
               
               
               Cow position:chr2:12186653-12186807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:354-520
               
               
               Cow position:chr2:26574783-26574942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):87, 104

               
               
               Conread position:354-520
               
               
               Cow position:chr2:70846446-70846279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):26, 76

               
               
               Conread position:354-530
               
               
               Cow position:chr2:15400925-15400753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):74, 105

               
               
               Conread position:354-530
               
               
               Cow position:chr2:20940708-20940900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:354-530
               
               
               Cow position:chr2:21171627-21171797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:354-530
               
               
               Cow position:chr2:38619413-38619242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:354-534
               
               
               Cow position:chr2:39479984-39480162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):85, 120

               
               
               Conread position:354-534
               
               
               Cow position:chr2:42897688-42897867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:354-534
               
               
               Cow position:chr2:44063753-44063579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:354-534
               
               
               Cow position:chr2:67047442-67047620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:354-534
               
               
               Cow position:chr2:68390757-68390932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:128
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:354-534
               
               
               Cow position:chr2:70449049-70449220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):127, 27

               
               
               Conread position:354-534
               
               
               Cow position:chr2:73923835-73924014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:354-535
               
               
               Cow position:chr2:20919538-20919353 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):93, 60

               
               
               Conread position:354-540
               
               
               Cow position:chr2:55387596-55387774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):180, 22

               
               
               Conread position:354-543
               
               
               Cow position:chr2:50825652-50825842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:133
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):122, 144

               
               
               Conread position:355-534
               
               
               Cow position:chr2:63568734-63568908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:355-541
               
               
               Cow position:chr2:19164943-19164763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:132
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:355-541
               
               
               Cow position:chr2:21327238-21327415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:141
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):43, 65

               
               
               Conread position:357-529
               
               
               Cow position:chr2:65603610-65603445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:129
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):43, 74

               
               
               Conread position:357-539
               
               
               Cow position:chr2:22759952-22759770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):104, 121

               
               
               Conread position:357-539
               
               
               Cow position:chr2:47784631-47784804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:133
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:358-534
               
               
               Cow position:chr2:36124460-36124632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:358-534
               
               
               Cow position:chr2:78379392-78379222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:358-534
               
               
               Cow position:chr2:85161407-85161237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:358-541
               
               
               Cow position:chr2:47784811-47784993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):176, 37

               
               
               Conread position:358-548
               
               
               Cow position:chr2:20337066-20336877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:359-533
               
               
               Cow position:chr2:70657216-70657393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:142
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):64, 120

               
               
               Conread position:359-534
               
               
               Cow position:chr2:37059141-37058970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:359-534
               
               
               Cow position:chr2:50106135-50106308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):79, 32

               
               
               Conread position:359-551
               
               
               Cow position:chr2:84754813-84755004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:360-518
               
               
               Cow position:chr2:24669393-24669552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):21, 109

               
               
               Conread position:360-518
               
               
               Cow position:chr2:83273644-83273492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):81, 94

               
               
               Conread position:360-530
               
               
               Cow position:chr2:7908846-7909010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:361-530
               
               
               Cow position:chr2:30384238-30384070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):88, 95

               
               
               Conread position:361-530
               
               
               Cow position:chr2:47194991-47195161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):31, 112

               
               
               Conread position:362-486
               
               
               Cow position:chr2:5815988-5815865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:100
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:362-512
               
               
               Cow position:chr2:19594988-19595137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:362-520
               
               
               Cow position:chr2:50368222-50368382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):60, 91

               
               
               Conread position:362-542
               
               
               Cow position:chr2:5755265-5755094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):173, 60

               
               
               Conread position:363-529
               
               
               Cow position:chr2:78116331-78116166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:128
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:363-534
               
               
               Cow position:chr2:30127258-30127091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:363-534
               
               
               Cow position:chr2:85163402-85163228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:131
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):37, 60

               
               
               Conread position:363-542
               
               
               Cow position:chr2:49345024-49345202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:366-530
               
               
               Cow position:chr2:56771472-56771310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:367-477
               
               
               Cow position:chr2:39484666-39484557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:90
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:367-534
               
               
               Cow position:chr2:70771847-70771679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):63, 108

               
               
               Conread position:368-541
               
               
               Cow position:chr2:51417262-51417102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:370-519
               
               
               Cow position:chr2:53567527-53567668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:370-520
               
               
               Cow position:chr2:39483522-39483671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:118
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:370-530
               
               
               Cow position:chr2:44313680-44313521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:370-530
               
               
               Cow position:chr2:74070371-74070522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:370-534
               
               
               Cow position:chr2:85498338-85498177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:127
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):84, 9

               
               
               Conread position:372-538
               
               
               Cow position:chr2:82121991-82121824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:123
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):81, 103

               
               
               Conread position:373-538
               
               
               Cow position:chr2:36376900-36377063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:373-539
               
               
               Cow position:chr2:38700340-38700177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:127
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:374-534
               
               
               Cow position:chr2:43139614-43139456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):66, 86

               
               
               Conread position:374-548
               
               
               Cow position:chr2:70147955-70148128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:375-520
               
               
               Cow position:chr2:41459136-41459282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:115
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):56, 100

               
               
               Conread position:375-520
               
               
               Cow position:chr2:47165786-47165645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:375-528
               
               
               Cow position:chr2:73650450-73650602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:375-530
               
               
               Cow position:chr2:16751835-16751681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:375-534
               
               
               Cow position:chr2:21377989-21378147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):80, 99

               
               
               Conread position:375-534
               
               
               Cow position:chr2:29930852-29930693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:115
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:375-534
               
               
               Cow position:chr2:59992208-59992050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:375-534
               
               
               Cow position:chr2:71892520-71892679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:124
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):154, 96

               
               
               Conread position:375-534
               
               
               Cow position:chr2:84344107-84343949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:127
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):19, 73

               
               
               Conread position:375-534
               
               
               Cow position:chr2:86490599-86490446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:124
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:375-539
               
               
               Cow position:chr2:33711945-33711778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:375-541
               
               
               Cow position:chr2:40508553-40508387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):160, 102

               
               
               Conread position:375-543
               
               
               Cow position:chr2:27599455-27599294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:375-544
               
               
               Cow position:chr2:79687487-79687330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:376-543
               
               
               Cow position:chr2:78249781-78249948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):158, 97

               
               
               Conread position:376-574
               
               
               Cow position:chr2:22371409-22371602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:377-539
               
               
               Cow position:chr2:68657191-68657352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):39, 95

               
               
               Conread position:378-543
               
               
               Cow position:chr2:72359588-72359423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):63, 96

               
               
               Conread position:378-548
               
               
               Cow position:chr2:13544041-13544201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:379-520
               
               
               Cow position:chr2:74013023-74012883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:380-531
               
               
               Cow position:chr2:47123510-47123359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):64, 70

               
               
               Conread position:380-533
               
               
               Cow position:chr2:1410088-1409936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:380-534
               
               
               Cow position:chr2:1036340-1036188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:380-534
               
               
               Cow position:chr2:58070041-58070194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:381-540
               
               
               Cow position:chr2:50862450-50862611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):26, 99

               
               
               Conread position:381-541
               
               
               Cow position:chr2:26159921-26160085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):59, 97

               
               
               Conread position:381-548
               
               
               Cow position:chr2:21916686-21916519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:129
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):151, 92

               
               
               Conread position:382-534
               
               
               Cow position:chr2:67621392-67621539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:382-543
               
               
               Cow position:chr2:72541282-72541128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:383-540
               
               
               Cow position:chr2:74198279-74198122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:125
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):59, 95

               
               
               Conread position:384-537
               
               
               Cow position:chr2:3728079-3728225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:384-542
               
               
               Cow position:chr2:67810989-67810833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:387-529
               
               
               Cow position:chr2:80237350-80237209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:106
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:387-530
               
               
               Cow position:chr2:50446035-50446177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:106
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:387-534
               
               
               Cow position:chr2:58336167-58336024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:387-542
               
               
               Cow position:chr2:617950-617801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:387-543
               
               
               Cow position:chr2:25284091-25284246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:387-543
               
               
               Cow position:chr2:38911123-38910972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:115
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:389-543
               
               
               Cow position:chr2:66027614-66027767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:119
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:389-548
               
               
               Cow position:chr2:84501312-84501154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):145, 21

               
               
               Conread position:390-541
               
               
               Cow position:chr2:45799871-45799720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):60, 48

               
               
               Conread position:395-519
               
               
               Cow position:chr2:8747885-8747762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:102
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:395-529
               
               
               Cow position:chr2:19530831-19530964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:395-530
               
               
               Cow position:chr2:2098249-2098116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:105
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:395-540
               
               
               Cow position:chr2:22729428-22729569 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:112
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:395-543
               
               
               Cow position:chr2:35466473-35466327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:396-530
               
               
               Cow position:chr2:82269931-82269801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:107
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:398-548
               
               
               Cow position:chr2:56021378-56021528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:121
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):36, 49

               
               
               Conread position:405-582
               
               
               Cow position:chr2:75331754-75331578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):127, 71

               
               
               Conread position:411-530
               
               
               Cow position:chr2:29974718-29974598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:100
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:414-532
               
               
               Cow position:chr2:39864506-39864623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:96
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:416-541
               
               
               Cow position:chr2:35299413-35299537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:100
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:419-534
               
               
               Cow position:chr2:11163139-11163023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:96
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):28, 15
Show alignments to all cow chromosomes.