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Cow genome map

           
Conread name:
           
Ss1.1-LyN1-MLN01H090075.5
        

               
Conread position:
               
186-529
               

               
Cow position:
               
chr25:1840177-1840512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
243-514
               

               
Cow position:
               
chr25:7380941-7380662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 214
               

               
Conread position:
               
251-444
               

               
Cow position:
               
chr25:34788344-34788144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
254-534
               

               
Cow position:
               
chr25:11057119-11057411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
255-514
               

               
Cow position:
               
chr25:16867165-16867421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
255-520
               

               
Cow position:
               
chr25:35612388-35612118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
255-530
               

               
Cow position:
               
chr25:19849778-19850057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
256-465
               

               
Cow position:
               
chr25:36120427-36120629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
256-472
               

               
Cow position:
               
chr25:33978291-33978084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
256-546
               

               
Cow position:
               
chr25:5646589-5646299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 156
               

               
Conread position:
               
257-512
               

               
Cow position:
               
chr25:6464106-6463854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
257-514
               

               
Cow position:
               
chr25:20008060-20008310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
257-530
               

               
Cow position:
               
chr25:41130153-41130422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
257-533
               

               
Cow position:
               
chr25:17658533-17658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 215
               

               
Conread position:
               
258-534
               

               
Cow position:
               
chr25:11956732-11957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 18
               

               
Conread position:
               
259-392
               

               
Cow position:
               
chr25:16361749-16361614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr25:21951051-21951240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
259-444
               

               
Cow position:
               
chr25:24066732-24066556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-447
               

               
Cow position:
               
chr25:20133385-20133202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
259-447
               

               
Cow position:
               
chr25:28188019-28187832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
259-454
               

               
Cow position:
               
chr25:18564417-18564606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
259-455
               

               
Cow position:
               
chr25:12252885-12252688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
259-464
               

               
Cow position:
               
chr25:31230308-31230118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
259-468
               

               
Cow position:
               
chr25:20447498-20447705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
259-468
               

               
Cow position:
               
chr25:36017465-36017667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
259-483
               

               
Cow position:
               
chr25:18905813-18906034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-492
               

               
Cow position:
               
chr25:25861430-25861190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
259-506
               

               
Cow position:
               
chr25:16064817-16065050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
259-510
               

               
Cow position:
               
chr25:9315947-9316196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
259-510
               

               
Cow position:
               
chr25:18294387-18294139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr25:6996712-6996959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr25:7805891-7806142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr25:26133968-26134220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
259-514
               

               
Cow position:
               
chr25:6977909-6978159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
259-517
               

               
Cow position:
               
chr25:17342383-17342640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
259-518
               

               
Cow position:
               
chr25:19364133-19363880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
160, 43
               

               
Conread position:
               
259-519
               

               
Cow position:
               
chr25:7216757-7216998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr25:8346075-8345819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr25:18487598-18487852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
259-520
               

               
Cow position:
               
chr25:22730756-22731007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
259-523
               

               
Cow position:
               
chr25:16100512-16100771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
259-524
               

               
Cow position:
               
chr25:24207493-24207226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
259-528
               

               
Cow position:
               
chr25:5920868-5921136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 215
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:5846881-5846613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:7035483-7035752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:17914710-17914976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
203, 31
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:20664366-20664087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 222
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:30816813-30817084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 215
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:33663980-33663717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:36081804-36082060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
263, 39
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr25:37981524-37981803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:11585444-11585726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
190, 40
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:12305203-12305475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:15409987-15409726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:17474586-17474316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:26225098-26224840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:26700958-26701216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-534
               

               
Cow position:
               
chr25:30319516-30319252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
259-536
               

               
Cow position:
               
chr25:33686754-33686484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
259-537
               

               
Cow position:
               
chr25:18156359-18156088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr25:433122-432848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
259-539
               

               
Cow position:
               
chr25:17724983-17725236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr25:6292495-6292771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr25:1763017-1763288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 31
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr25:22756537-22756815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr25:24651523-24651254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr25:30618991-30619272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
231, 39
               

               
Conread position:
               
259-542
               

               
Cow position:
               
chr25:6470290-6469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 207
               

               
Conread position:
               
259-542
               

               
Cow position:
               
chr25:7641527-7641251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
259-542
               

               
Cow position:
               
chr25:14791681-14791959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
259-542
               

               
Cow position:
               
chr25:36835500-36835233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
259-543
               

               
Cow position:
               
chr25:7750377-7750653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
276, 187
               

               
Conread position:
               
259-544
               

               
Cow position:
               
chr25:35052694-35052412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr25:11066218-11065926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
259-548
               

               
Cow position:
               
chr25:18201998-18201717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
260-517
               

               
Cow position:
               
chr25:17566516-17566770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
260-542
               

               
Cow position:
               
chr25:17119673-17119949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
261-421
               

               
Cow position:
               
chr25:37594333-37594493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
261-510
               

               
Cow position:
               
chr25:12293818-12293572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
261-523
               

               
Cow position:
               
chr25:23245073-23244819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr25:15634542-15634294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
263-465
               

               
Cow position:
               
chr25:15440845-15440651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
263-517
               

               
Cow position:
               
chr25:8226032-8226283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
263-529
               

               
Cow position:
               
chr25:12260963-12260695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
263-530
               

               
Cow position:
               
chr25:7816912-7817177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
265-518
               

               
Cow position:
               
chr25:9968383-9968635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
266-412
               

               
Cow position:
               
chr25:15377258-15377406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
266-416
               

               
Cow position:
               
chr25:9349346-9349199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
266-453
               

               
Cow position:
               
chr25:26654844-26655026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
266-462
               

               
Cow position:
               
chr25:17991654-17991459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
266-500
               

               
Cow position:
               
chr25:7468036-7468262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
266-518
               

               
Cow position:
               
chr25:13443479-13443227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
266-520
               

               
Cow position:
               
chr25:18721188-18720945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
266-524
               

               
Cow position:
               
chr25:6683130-6682864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
171, 216
               

               
Conread position:
               
266-529
               

               
Cow position:
               
chr25:21893270-21893525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr25:13272501-13272761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr25:16921861-16921601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 12
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr25:21183815-21184078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr25:22346708-22346975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr25:34982224-34981963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr25:1824163-1823895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr25:23053494-23053759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr25:33550442-33550707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
266-539
               

               
Cow position:
               
chr25:9269284-9269538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
266-542
               

               
Cow position:
               
chr25:27532737-27532469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
266-543
               

               
Cow position:
               
chr25:26679162-26679433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
269, 46
               

               
Conread position:
               
266-563
               

               
Cow position:
               
chr25:38135681-38135978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
267-540
               

               
Cow position:
               
chr25:17403420-17403678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
268-548
               

               
Cow position:
               
chr25:35762527-35762798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
270-497
               

               
Cow position:
               
chr25:7077940-7078162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
271-437
               

               
Cow position:
               
chr25:26089877-26089710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
271-446
               

               
Cow position:
               
chr25:21894947-21894772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 112
               

               
Conread position:
               
271-457
               

               
Cow position:
               
chr25:14196799-14196984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
271-489
               

               
Cow position:
               
chr25:18988326-18988531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
271-513
               

               
Cow position:
               
chr25:22203749-22203522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
271-518
               

               
Cow position:
               
chr25:36535497-36535238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
271-519
               

               
Cow position:
               
chr25:11038283-11038544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 216
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr25:6474157-6473894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 217
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr25:10504399-10504153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
271-520
               

               
Cow position:
               
chr25:25716590-25716827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr25:1838177-1838435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
271-530
               

               
Cow position:
               
chr25:14513051-14513298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
79, 176
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr25:14152127-14152384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr25:33555547-33555804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
271-536
               

               
Cow position:
               
chr25:7007848-7008118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 169
               

               
Conread position:
               
271-540
               

               
Cow position:
               
chr25:13380672-13380396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 214
               

               
Conread position:
               
271-540
               

               
Cow position:
               
chr25:26160459-26160728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
271-543
               

               
Cow position:
               
chr25:26338390-26338666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
272-428
               

               
Cow position:
               
chr25:16714330-16714175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
272-444
               

               
Cow position:
               
chr25:22751068-22750897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
272-457
               

               
Cow position:
               
chr25:2499210-2499391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
272-468
               

               
Cow position:
               
chr25:26051841-26052039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
272-534
               

               
Cow position:
               
chr25:10643369-10643120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-417
               

               
Cow position:
               
chr25:7023107-7023251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
273-461
               

               
Cow position:
               
chr25:12840781-12840591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
273-461
               

               
Cow position:
               
chr25:13325520-13325707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
273-462
               

               
Cow position:
               
chr25:10218106-10217921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
273-472
               

               
Cow position:
               
chr25:38421607-38421804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr25:21289288-21289538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
273-529
               

               
Cow position:
               
chr25:22317622-22317875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
275-535
               

               
Cow position:
               
chr25:21501109-21500845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 207
               

               
Conread position:
               
280-520
               

               
Cow position:
               
chr25:26306258-26306021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
145, 151
               

               
Conread position:
               
280-534
               

               
Cow position:
               
chr25:19478621-19478886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
280-535
               

               
Cow position:
               
chr25:20069671-20069910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
280-561
               

               
Cow position:
               
chr25:9843122-9843406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 191
               

               
Conread position:
               
281-443
               

               
Cow position:
               
chr25:23817894-23817731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
282-538
               

               
Cow position:
               
chr25:17704694-17704939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
283-543
               

               
Cow position:
               
chr25:14225308-14225572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
284-530
               

               
Cow position:
               
chr25:26087470-26087710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
285-458
               

               
Cow position:
               
chr25:3145797-3145967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
286-454
               

               
Cow position:
               
chr25:21266943-21267107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 116
               

               
Conread position:
               
288-520
               

               
Cow position:
               
chr25:25948133-25947896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
288-534
               

               
Cow position:
               
chr25:9025081-9025319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
288-539
               

               
Cow position:
               
chr25:12097796-12098038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
289-530
               

               
Cow position:
               
chr25:20157342-20157101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
290-544
               

               
Cow position:
               
chr25:22348508-22348252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
291-512
               

               
Cow position:
               
chr25:27622076-27622290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
291-530
               

               
Cow position:
               
chr25:7011017-7010778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
291-539
               

               
Cow position:
               
chr25:19679312-19679553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 140
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr25:9769374-9769595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
292-530
               

               
Cow position:
               
chr25:18288810-18288578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
294-534
               

               
Cow position:
               
chr25:14110978-14111217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
297-512
               

               
Cow position:
               
chr25:6114986-6115203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
298-465
               

               
Cow position:
               
chr25:35090609-35090438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
298-530
               

               
Cow position:
               
chr25:15566044-15565798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
298-541
               

               
Cow position:
               
chr25:4521873-4521638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 69
               

               
Conread position:
               
299-444
               

               
Cow position:
               
chr25:31762643-31762498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
299-530
               

               
Cow position:
               
chr25:9939291-9939065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 68
               

               
Conread position:
               
300-518
               

               
Cow position:
               
chr25:9615802-9616018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
301-503
               

               
Cow position:
               
chr25:8102639-8102838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
190, 21
               

               
Conread position:
               
301-514
               

               
Cow position:
               
chr25:40904863-40904651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr25:6258850-6259066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 149
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr25:33311360-33311141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 173
               

               
Conread position:
               
301-521
               

               
Cow position:
               
chr25:13222867-13223081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
302-467
               

               
Cow position:
               
chr25:61618-61783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr25:5701726-5701929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
302-506
               

               
Cow position:
               
chr25:41132393-41132198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 145
               

               
Conread position:
               
302-509
               

               
Cow position:
               
chr25:6238094-6238296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 130
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr25:6803514-6803722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr25:26578633-26578426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr25:35180882-35181087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
302-520
               

               
Cow position:
               
chr25:9216504-9216722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
302-530
               

               
Cow position:
               
chr25:7309415-7309644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 173
               

               
Conread position:
               
302-530
               

               
Cow position:
               
chr25:10657074-10656846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 134
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr25:26136855-26136624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr25:35109301-35109082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
302-539
               

               
Cow position:
               
chr25:7726630-7726866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr25:20402741-20402546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
303-505
               

               
Cow position:
               
chr25:7799517-7799721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
303-512
               

               
Cow position:
               
chr25:22698502-22698294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
303-517
               

               
Cow position:
               
chr25:536337-536124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
303-530
               

               
Cow position:
               
chr25:12657340-12657114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
303-530
               

               
Cow position:
               
chr25:17918943-17919169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 171
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr25:9002641-9002865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 101
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr25:10407448-10407215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr25:18760739-18760515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
303-543
               

               
Cow position:
               
chr25:10611155-10610914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
303-543
               

               
Cow position:
               
chr25:19069863-19069627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
303-544
               

               
Cow position:
               
chr25:30462336-30462115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
303-546
               

               
Cow position:
               
chr25:9990141-9989894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr25:11897658-11897409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr25:22178886-22179120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr25:27868773-27869021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
304-461
               

               
Cow position:
               
chr25:5474260-5474103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
304-468
               

               
Cow position:
               
chr25:4009063-4009229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
304-468
               

               
Cow position:
               
chr25:26160935-26161102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
304-505
               

               
Cow position:
               
chr25:12637715-12637915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
304-512
               

               
Cow position:
               
chr25:37562665-37562875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
304-517
               

               
Cow position:
               
chr25:40321316-40321117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr25:23779361-23779151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr25:28986834-28987054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
304-536
               

               
Cow position:
               
chr25:5797473-5797705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
304-539
               

               
Cow position:
               
chr25:34242135-34241885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
304-541
               

               
Cow position:
               
chr25:26072587-26072360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
305-441
               

               
Cow position:
               
chr25:30656675-30656542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
305-519
               

               
Cow position:
               
chr25:35339219-35339009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
305-536
               

               
Cow position:
               
chr25:28597641-28597406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
305-543
               

               
Cow position:
               
chr25:20487472-20487230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
306-444
               

               
Cow position:
               
chr25:4221631-4221493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
306-529
               

               
Cow position:
               
chr25:22298609-22298823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
306-548
               

               
Cow position:
               
chr25:13823747-13823509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
307-444
               

               
Cow position:
               
chr25:13503406-13503544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr25:33374014-33373794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
308-534
               

               
Cow position:
               
chr25:18491011-18491233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
308-537
               

               
Cow position:
               
chr25:21317454-21317219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr25:11780252-11780475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
214, 59
               

               
Conread position:
               
312-455
               

               
Cow position:
               
chr25:22520315-22520458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
312-470
               

               
Cow position:
               
chr25:15294774-15294932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
312-512
               

               
Cow position:
               
chr25:6718268-6718080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
312-529
               

               
Cow position:
               
chr25:5807921-5808139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
312-534
               

               
Cow position:
               
chr25:14106810-14107033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
132, 63
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr25:15218115-15218268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
314-534
               

               
Cow position:
               
chr25:23520048-23519841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
314-536
               

               
Cow position:
               
chr25:20085551-20085778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
314-544
               

               
Cow position:
               
chr25:33101625-33101407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
315-452
               

               
Cow position:
               
chr25:12064029-12064165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
319-530
               

               
Cow position:
               
chr25:10791829-10791627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
319-532
               

               
Cow position:
               
chr25:8863407-8863193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
189, 154
               

               
Conread position:
               
319-541
               

               
Cow position:
               
chr25:9522629-9522850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr25:12206522-12206756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
215, 154
               

               
Conread position:
               
321-512
               

               
Cow position:
               
chr25:8898419-8898609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
321-534
               

               
Cow position:
               
chr25:36873069-36872859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
322-543
               

               
Cow position:
               
chr25:28423137-28423353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
324-544
               

               
Cow position:
               
chr25:31514171-31514390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
325-507
               

               
Cow position:
               
chr25:10138309-10138491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
325-518
               

               
Cow position:
               
chr25:20638022-20638211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
325-530
               

               
Cow position:
               
chr25:18685861-18685651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 154
               

               
Conread position:
               
333-488
               

               
Cow position:
               
chr25:5515305-5515454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
335-525
               

               
Cow position:
               
chr25:18646586-18646767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
336-455
               

               
Cow position:
               
chr25:23016022-23016141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
336-518
               

               
Cow position:
               
chr25:13304595-13304415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
336-520
               

               
Cow position:
               
chr25:23323492-23323679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
123, 141
               

               
Conread position:
               
336-530
               

               
Cow position:
               
chr25:36369821-36370013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
336-530
               

               
Cow position:
               
chr25:36375512-36375704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
336-534
               

               
Cow position:
               
chr25:25739670-25739859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
336-548
               

               
Cow position:
               
chr25:29826412-29826629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 83
               

               
Conread position:
               
337-533
               

               
Cow position:
               
chr25:2262818-2263012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
337-537
               

               
Cow position:
               
chr25:18551331-18551134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
338-504
               

               
Cow position:
               
chr25:13049298-13049134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
342-468
               

               
Cow position:
               
chr25:26059499-26059624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
342-520
               

               
Cow position:
               
chr25:7403333-7403156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
342-520
               

               
Cow position:
               
chr25:13542978-13542801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
342-534
               

               
Cow position:
               
chr25:17137880-17138072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
342-534
               

               
Cow position:
               
chr25:17724216-17724024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
342-534
               

               
Cow position:
               
chr25:26100702-26100889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
342-543
               

               
Cow position:
               
chr25:15423617-15423415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
344-489
               

               
Cow position:
               
chr25:6999226-6999082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
344-544
               

               
Cow position:
               
chr25:22373480-22373280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
145, 131
               

               
Conread position:
               
345-508
               

               
Cow position:
               
chr25:6061374-6061533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
349-461
               

               
Cow position:
               
chr25:3983301-3983411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
349-520
               

               
Cow position:
               
chr25:5791702-5791531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 125
               

               
Conread position:
               
349-520
               

               
Cow position:
               
chr25:11857972-11857804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
349-523
               

               
Cow position:
               
chr25:7005527-7005700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
349-530
               

               
Cow position:
               
chr25:10332615-10332795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr25:6973303-6973483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr25:15349890-15349712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr25:36020425-36020607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 120
               

               
Conread position:
               
349-537
               

               
Cow position:
               
chr25:12223585-12223763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr25:7673316-7673507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 126
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr25:31705239-31705430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
185, 124
               

               
Conread position:
               
349-541
               

               
Cow position:
               
chr25:9023766-9023948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
349-541
               

               
Cow position:
               
chr25:15447511-15447695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
349-543
               

               
Cow position:
               
chr25:22849037-22848836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
349-548
               

               
Cow position:
               
chr25:7684883-7684690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
349-548
               

               
Cow position:
               
chr25:24115301-24115103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
189, 110
               

               
Conread position:
               
350-530
               

               
Cow position:
               
chr25:24176798-24176977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
350-562
               

               
Cow position:
               
chr25:32750094-32750300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
351-519
               

               
Cow position:
               
chr25:8347669-8347834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
351-539
               

               
Cow position:
               
chr25:31657260-31657079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
352-541
               

               
Cow position:
               
chr25:5383260-5383070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
353-530
               

               
Cow position:
               
chr25:21443350-21443174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
354-486
               

               
Cow position:
               
chr25:5673426-5673294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
354-506
               

               
Cow position:
               
chr25:7298879-7298725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
354-519
               

               
Cow position:
               
chr25:2624816-2624975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
354-528
               

               
Cow position:
               
chr25:26061707-26061534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
354-530
               

               
Cow position:
               
chr25:3141523-3141693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
354-530
               

               
Cow position:
               
chr25:7277305-7277133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
354-530
               

               
Cow position:
               
chr25:37965277-37965455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
354-534
               

               
Cow position:
               
chr25:1982962-1982789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
354-534
               

               
Cow position:
               
chr25:14457169-14457348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
354-534
               

               
Cow position:
               
chr25:28662130-28662303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
354-536
               

               
Cow position:
               
chr25:19832022-19832198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
354-538
               

               
Cow position:
               
chr25:33100595-33100772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
354-539
               

               
Cow position:
               
chr25:22154044-22154233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
354-540
               

               
Cow position:
               
chr25:32745358-32745538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
180, 92
               

               
Conread position:
               
354-543
               

               
Cow position:
               
chr25:26058661-26058849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
354-548
               

               
Cow position:
               
chr25:4192024-4192217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
354-548
               

               
Cow position:
               
chr25:36155838-36156024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
355-542
               

               
Cow position:
               
chr25:26269696-26269510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
357-530
               

               
Cow position:
               
chr25:7311373-7311202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
357-534
               

               
Cow position:
               
chr25:14212917-14212742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
358-530
               

               
Cow position:
               
chr25:4157222-4157055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
358-530
               

               
Cow position:
               
chr25:35802639-35802471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 114
               

               
Conread position:
               
358-540
               

               
Cow position:
               
chr25:14164218-14164400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 114
               

               
Conread position:
               
358-544
               

               
Cow position:
               
chr25:22768242-22768424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
359-534
               

               
Cow position:
               
chr25:27520929-27520754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
360-519
               

               
Cow position:
               
chr25:11855523-11855366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
361-519
               

               
Cow position:
               
chr25:12773307-12773457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
361-534
               

               
Cow position:
               
chr25:26989224-26989397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
362-529
               

               
Cow position:
               
chr25:5675529-5675363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
363-530
               

               
Cow position:
               
chr25:27825130-27825296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
370-520
               

               
Cow position:
               
chr25:7622855-7623004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
370-530
               

               
Cow position:
               
chr25:8410998-8410841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
370-530
               

               
Cow position:
               
chr25:9494741-9494901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
370-534
               

               
Cow position:
               
chr25:15999516-15999354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
370-548
               

               
Cow position:
               
chr25:447867-447697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
168, 87
               

               
Conread position:
               
372-539
               

               
Cow position:
               
chr25:18882238-18882071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
373-520
               

               
Cow position:
               
chr25:9640998-9640852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
373-538
               

               
Cow position:
               
chr25:20788783-20788628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
373-539
               

               
Cow position:
               
chr25:21547196-21547358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
375-534
               

               
Cow position:
               
chr25:33272674-33272834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
376-505
               

               
Cow position:
               
chr25:18568175-18568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
376-523
               

               
Cow position:
               
chr25:22571000-22571144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
377-548
               

               
Cow position:
               
chr25:25886555-25886383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
379-520
               

               
Cow position:
               
chr25:8661093-8660952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
379-541
               

               
Cow position:
               
chr25:7185231-7185069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
380-503
               

               
Cow position:
               
chr25:33111373-33111254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
382-543
               

               
Cow position:
               
chr25:11405846-11406006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
387-540
               

               
Cow position:
               
chr25:6190290-6190144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
388-528
               

               
Cow position:
               
chr25:22642318-22642463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
389-534
               

               
Cow position:
               
chr25:19460128-19460272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
390-530
               

               
Cow position:
               
chr25:37648838-37648974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
391-534
               

               
Cow position:
               
chr25:22119600-22119458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
397-533
               

               
Cow position:
               
chr25:6812172-6812032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
402-534
               

               
Cow position:
               
chr25:12092682-12092815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
409-541
               

               
Cow position:
               
chr25:12817725-12817856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
414-529
               

               
Cow position:
               
chr25:13732837-13732950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
426-542
               

               
Cow position:
               
chr25:11096146-11096031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               
Show alignments to all cow chromosomes.