Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-LyN1-MLN01H090075.5
        

               Conread position:
               254-530
               

               Cow position:
               chr27:12658314-12658591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               254-534
               

               Cow position:
               chr27:16786858-16786589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               255-404
               

               Cow position:
               chr27:28472814-28472664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               87, 96
               

               Conread position:
               255-503
               

               Cow position:
               chr27:10582403-10582157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               190, 32
               

               Conread position:
               255-505
               

               Cow position:
               chr27:7851419-7851173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               186, 44
               

               Conread position:
               255-519
               

               Cow position:
               chr27:29798985-29798725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               255-520
               

               Cow position:
               chr27:13317946-13318205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               255-544
               

               Cow position:
               chr27:19509045-19508760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               256-434
               

               Cow position:
               chr27:17646137-17646314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               256-542
               

               Cow position:
               chr27:1636905-1637176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               257-519
               

               Cow position:
               chr27:22454749-22455020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               168, 42
               

               Conread position:
               257-543
               

               Cow position:
               chr27:20637037-20637309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               258-530
               

               Cow position:
               chr27:30872031-30872295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               259-432
               

               Cow position:
               chr27:715529-715357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               259-437
               

               Cow position:
               chr27:30354316-30354493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               259-444
               

               Cow position:
               chr27:2034540-2034353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               259-444
               

               Cow position:
               chr27:30389268-30389453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               259-447
               

               Cow position:
               chr27:27064413-27064598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               259-450
               

               Cow position:
               chr27:8263308-8263500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               259-455
               

               Cow position:
               chr27:18826580-18826387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               259-455
               

               Cow position:
               chr27:27640975-27641177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               34, 135
               

               Conread position:
               259-461
               

               Cow position:
               chr27:15343253-15343452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               177, 40
               

               Conread position:
               259-463
               

               Cow position:
               chr27:17918288-17918488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               259-468
               

               Cow position:
               chr27:18922803-18923014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               259-468
               

               Cow position:
               chr27:30988823-30988618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               259-471
               

               Cow position:
               chr27:8168404-8168613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               259-472
               

               Cow position:
               chr27:22423537-22423333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               259-475
               

               Cow position:
               chr27:26218733-26218525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 127
               

               Conread position:
               259-482
               

               Cow position:
               chr27:7974201-7973984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               259-489
               

               Cow position:
               chr27:22418740-22418961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               41, 85
               

               Conread position:
               259-489
               

               Cow position:
               chr27:30260862-30261092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               259-496
               

               Cow position:
               chr27:15866243-15866015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               259-503
               

               Cow position:
               chr27:1768595-1768833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               259-503
               

               Cow position:
               chr27:17994916-17995157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               259-504
               

               Cow position:
               chr27:20514848-20514608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               259-510
               

               Cow position:
               chr27:6290499-6290253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               259-510
               

               Cow position:
               chr27:24394024-24393775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               259-511
               

               Cow position:
               chr27:16249348-16249600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               259-512
               

               Cow position:
               chr27:10659211-10658958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 215
               

               Conread position:
               259-518
               

               Cow position:
               chr27:29380883-29380635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               40, 90
               

               Conread position:
               259-519
               

               Cow position:
               chr27:2644064-2644325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               162, 39
               

               Conread position:
               259-519
               

               Cow position:
               chr27:23128483-23128238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               181, 61
               

               Conread position:
               259-519
               

               Cow position:
               chr27:23890966-23890706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               166, 48
               

               Conread position:
               259-520
               

               Cow position:
               chr27:2592575-2592309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               259-520
               

               Cow position:
               chr27:10653713-10653454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               204, 48
               

               Conread position:
               259-520
               

               Cow position:
               chr27:19660962-19660700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 216
               

               Conread position:
               259-520
               

               Cow position:
               chr27:21408534-21408794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               259-520
               

               Cow position:
               chr27:23554303-23554557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               259-523
               

               Cow position:
               chr27:18739411-18739143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 219
               

               Conread position:
               259-526
               

               Cow position:
               chr27:22559797-22560060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               259-527
               

               Cow position:
               chr27:22489305-22489037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               259-527
               

               Cow position:
               chr27:28896907-28896643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 39
               

               Conread position:
               259-529
               

               Cow position:
               chr27:6925116-6924845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               259-529
               

               Cow position:
               chr27:26428106-26428365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               259-529
               

               Cow position:
               chr27:27405042-27405306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               259-530
               

               Cow position:
               chr27:1353614-1353343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 216
               

               Conread position:
               259-530
               

               Cow position:
               chr27:2901238-2901503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               259-530
               

               Cow position:
               chr27:8062327-8062590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               259-530
               

               Cow position:
               chr27:13875758-13875495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               259-530
               

               Cow position:
               chr27:15865638-15865372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               39, 194
               

               Conread position:
               259-530
               

               Cow position:
               chr27:15867423-15867155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               259-530
               

               Cow position:
               chr27:16965600-16965337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 23
               

               Conread position:
               259-530
               

               Cow position:
               chr27:20101396-20101129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               259-530
               

               Cow position:
               chr27:21991181-21990905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 123
               

               Conread position:
               259-530
               

               Cow position:
               chr27:23545298-23545576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               259-532
               

               Cow position:
               chr27:17472836-17472574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               248, 31
               

               Conread position:
               259-532
               

               Cow position:
               chr27:26852565-26852822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               259-534
               

               Cow position:
               chr27:7649557-7649833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               259-534
               

               Cow position:
               chr27:23452486-23452221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               259-534
               

               Cow position:
               chr27:28921870-28922137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               259-534
               

               Cow position:
               chr27:30868713-30868993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               166, 39
               

               Conread position:
               259-538
               

               Cow position:
               chr27:18020135-18020404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               87, 40
               

               Conread position:
               259-538
               

               Cow position:
               chr27:30582766-30582495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               259-539
               

               Cow position:
               chr27:29184811-29185092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               259-540
               

               Cow position:
               chr27:19668768-19669053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 157
               

               Conread position:
               259-541
               

               Cow position:
               chr27:6550484-6550209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               192, 39
               

               Conread position:
               259-541
               

               Cow position:
               chr27:16275634-16275929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               259-541
               

               Cow position:
               chr27:20045911-20045647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               162, 13
               

               Conread position:
               259-541
               

               Cow position:
               chr27:27554656-27554928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               259-541
               

               Cow position:
               chr27:28518322-28518047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               259-541
               

               Cow position:
               chr27:30765063-30764783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 147
               

               Conread position:
               259-542
               

               Cow position:
               chr27:10307275-10307553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 31
               

               Conread position:
               259-542
               

               Cow position:
               chr27:26919875-26920176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               259-542
               

               Cow position:
               chr27:29816593-29816879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               132, 40
               

               Conread position:
               259-543
               

               Cow position:
               chr27:6500085-6499805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               271, 28
               

               Conread position:
               259-543
               

               Cow position:
               chr27:28280211-28279927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               90, 39
               

               Conread position:
               259-544
               

               Cow position:
               chr27:12516218-12515942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               259-546
               

               Cow position:
               chr27:24331748-24331460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 40
               

               Conread position:
               259-548
               

               Cow position:
               chr27:4390228-4390513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               259-548
               

               Cow position:
               chr27:12564396-12564685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               275, 214
               

               Conread position:
               259-548
               

               Cow position:
               chr27:12596792-12596525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               259-548
               

               Cow position:
               chr27:23860195-23859907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               259-548
               

               Cow position:
               chr27:31372951-31373228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               40, 119
               

               Conread position:
               259-553
               

               Cow position:
               chr27:28931767-28932063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 192
               

               Conread position:
               259-558
               

               Cow position:
               chr27:23511017-23510709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               260-539
               

               Cow position:
               chr27:18544020-18543740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               260-548
               

               Cow position:
               chr27:23507676-23507392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               261-460
               

               Cow position:
               chr27:26347590-26347783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               261-474
               

               Cow position:
               chr27:1290826-1291034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               261-475
               

               Cow position:
               chr27:28271126-28271337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               65, 38
               

               Conread position:
               261-532
               

               Cow position:
               chr27:30915032-30914767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               261-548
               

               Cow position:
               chr27:26793763-26794040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               262-452
               

               Cow position:
               chr27:26413229-26413418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               263-512
               

               Cow position:
               chr27:11536080-11536327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               263-530
               

               Cow position:
               chr27:10979886-10979622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               264-524
               

               Cow position:
               chr27:27558476-27558737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               45, 129
               

               Conread position:
               265-530
               

               Cow position:
               chr27:11561797-11561537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               266-433
               

               Cow position:
               chr27:26785970-26786136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               149, 30
               

               Conread position:
               266-467
               

               Cow position:
               chr27:23876821-23877023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 146
               

               Conread position:
               266-468
               

               Cow position:
               chr27:4156022-4155820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               36, 157
               

               Conread position:
               266-468
               

               Cow position:
               chr27:15643191-15642995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               266-484
               

               Cow position:
               chr27:28260517-28260726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               266-497
               

               Cow position:
               chr27:23632616-23632395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               266-503
               

               Cow position:
               chr27:15238763-15238524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               266-511
               

               Cow position:
               chr27:2885812-2886053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               266-518
               

               Cow position:
               chr27:27003254-27003485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               266-520
               

               Cow position:
               chr27:29086091-29086344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               266-521
               

               Cow position:
               chr27:26489885-26490134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               41, 191
               

               Conread position:
               266-528
               

               Cow position:
               chr27:27442147-27442396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               266-529
               

               Cow position:
               chr27:5553491-5553235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               266-530
               

               Cow position:
               chr27:19546491-19546759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 112
               

               Conread position:
               266-534
               

               Cow position:
               chr27:17397431-17397693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 186
               

               Conread position:
               266-534
               

               Cow position:
               chr27:19500215-19500478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               266-534
               

               Cow position:
               chr27:20748987-20749244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               32, 101
               

               Conread position:
               266-534
               

               Cow position:
               chr27:22171320-22171060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 102
               

               Conread position:
               266-534
               

               Cow position:
               chr27:23560010-23560271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               266-535
               

               Cow position:
               chr27:590740-591012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               180, 211
               

               Conread position:
               266-539
               

               Cow position:
               chr27:25152102-25151842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               193, 31
               

               Conread position:
               266-540
               

               Cow position:
               chr27:5744885-5744606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               266-543
               

               Cow position:
               chr27:16103828-16103560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               141, 31
               

               Conread position:
               266-543
               

               Cow position:
               chr27:26509141-26509407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               266-544
               

               Cow position:
               chr27:7615069-7615321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               266-544
               

               Cow position:
               chr27:21978119-21978395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               267-445
               

               Cow position:
               chr27:25277160-25276986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               268-465
               

               Cow position:
               chr27:20337119-20336925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               271-447
               

               Cow position:
               chr27:27038823-27038996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 92
               

               Conread position:
               271-454
               

               Cow position:
               chr27:20803642-20803824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               271-454
               

               Cow position:
               chr27:21453077-21453260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-455
               

               Cow position:
               chr27:27270523-27270708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               271-465
               

               Cow position:
               chr27:15215248-15215050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               271-498
               

               Cow position:
               chr27:15825709-15825929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               271-510
               

               Cow position:
               chr27:15925356-15925124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               170, 27
               

               Conread position:
               271-516
               

               Cow position:
               chr27:16230921-16231165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               271-517
               

               Cow position:
               chr27:22735573-22735819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               271-520
               

               Cow position:
               chr27:16088824-16088563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               89, 160
               

               Conread position:
               271-520
               

               Cow position:
               chr27:29831683-29831936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               156, 27
               

               Conread position:
               271-530
               

               Cow position:
               chr27:12425304-12425050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               271-530
               

               Cow position:
               chr27:24227779-24228042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               271-535
               

               Cow position:
               chr27:26226275-26226531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               271-538
               

               Cow position:
               chr27:12459300-12459042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               271-539
               

               Cow position:
               chr27:18558374-18558111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               271-545
               

               Cow position:
               chr27:22440155-22439884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               272-444
               

               Cow position:
               chr27:4386047-4386217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               272-520
               

               Cow position:
               chr27:16705266-16705025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               272-520
               

               Cow position:
               chr27:19933079-19932838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               272-530
               

               Cow position:
               chr27:212978-212713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               272-530
               

               Cow position:
               chr27:2957419-2957179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               272-530
               

               Cow position:
               chr27:27020090-27020333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               272-532
               

               Cow position:
               chr27:20354598-20354360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               272-534
               

               Cow position:
               chr27:20552756-20553018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               25, 209
               

               Conread position:
               272-535
               

               Cow position:
               chr27:26111896-26112161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 209
               

               Conread position:
               272-540
               

               Cow position:
               chr27:28467436-28467718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               272-543
               

               Cow position:
               chr27:18646131-18646400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 168
               

               Conread position:
               273-398
               

               Cow position:
               chr27:24999727-24999850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               273-455
               

               Cow position:
               chr27:1789123-1789305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               273-495
               

               Cow position:
               chr27:24023155-24022936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               273-511
               

               Cow position:
               chr27:11151685-11151452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 139
               

               Conread position:
               273-512
               

               Cow position:
               chr27:22513663-22513901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               174, 29
               

               Conread position:
               273-512
               

               Cow position:
               chr27:29613475-29613711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               273-514
               

               Cow position:
               chr27:22552869-22553100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               273-529
               

               Cow position:
               chr27:26437105-26437357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 174
               

               Conread position:
               273-530
               

               Cow position:
               chr27:20078877-20078627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               273-530
               

               Cow position:
               chr27:20584444-20584705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               273-534
               

               Cow position:
               chr27:11982635-11982890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               273-548
               

               Cow position:
               chr27:5545595-5545322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               274-512
               

               Cow position:
               chr27:6541641-6541415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               274-513
               

               Cow position:
               chr27:28478594-28478363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               274-519
               

               Cow position:
               chr27:13841385-13841140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               275-461
               

               Cow position:
               chr27:20812917-20812732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               275-468
               

               Cow position:
               chr27:31017822-31018003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               275-512
               

               Cow position:
               chr27:1981359-1981120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 201
               

               Conread position:
               275-520
               

               Cow position:
               chr27:1190464-1190704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               275-530
               

               Cow position:
               chr27:11707821-11708070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               275-533
               

               Cow position:
               chr27:31210559-31210309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               277-534
               

               Cow position:
               chr27:11435313-11435569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 13
               

               Conread position:
               280-518
               

               Cow position:
               chr27:17933935-17933697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               42, 194
               

               Conread position:
               280-530
               

               Cow position:
               chr27:20897017-20897258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               280-534
               

               Cow position:
               chr27:426976-426728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               280-534
               

               Cow position:
               chr27:22035369-22035613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               280-537
               

               Cow position:
               chr27:23594328-23594074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               282-520
               

               Cow position:
               chr27:26188834-26188599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               282-534
               

               Cow position:
               chr27:25809517-25809758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               167, 27
               

               Conread position:
               282-541
               

               Cow position:
               chr27:23994414-23994665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               283-521
               

               Cow position:
               chr27:26883257-26883489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               283-529
               

               Cow position:
               chr27:27058403-27058642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               283-548
               

               Cow position:
               chr27:19496880-19496623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               285-548
               

               Cow position:
               chr27:15204227-15204492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               189, 27
               

               Conread position:
               286-551
               

               Cow position:
               chr27:9977692-9977427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               13, 173
               

               Conread position:
               289-518
               

               Cow position:
               chr27:30483298-30483530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               127, 193
               

               Conread position:
               289-530
               

               Cow position:
               chr27:19681951-19681711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               289-530
               

               Cow position:
               chr27:20719288-20719047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 185
               

               Conread position:
               290-520
               

               Cow position:
               chr27:13940558-13940778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 157
               

               Conread position:
               294-468
               

               Cow position:
               chr27:30908669-30908494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               294-512
               

               Cow position:
               chr27:14818228-14818010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               296-546
               

               Cow position:
               chr27:15926790-15926541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               297-507
               

               Cow position:
               chr27:29603809-29603603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               297-512
               

               Cow position:
               chr27:7304612-7304826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 124
               

               Conread position:
               298-461
               

               Cow position:
               chr27:23895410-23895252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               298-581
               

               Cow position:
               chr27:29249584-29249297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               299-512
               

               Cow position:
               chr27:13869614-13869400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               5, 176
               

               Conread position:
               299-520
               

               Cow position:
               chr27:15668782-15669002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               300-538
               

               Cow position:
               chr27:30455982-30455746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               231, 167
               

               Conread position:
               300-541
               

               Cow position:
               chr27:29991459-29991708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               300-548
               

               Cow position:
               chr27:23148154-23147906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               174, 207
               

               Conread position:
               301-512
               

               Cow position:
               chr27:20869694-20869902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 141
               

               Conread position:
               301-512
               

               Cow position:
               chr27:22426844-22427055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 173
               

               Conread position:
               301-517
               

               Cow position:
               chr27:5614573-5614361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               301-517
               

               Cow position:
               chr27:26163394-26163179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               301-518
               

               Cow position:
               chr27:26239012-26238798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 119
               

               Conread position:
               301-520
               

               Cow position:
               chr27:16512184-16512395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               301-534
               

               Cow position:
               chr27:7343441-7343670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 128
               

               Conread position:
               301-542
               

               Cow position:
               chr27:23169824-23170067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 172
               

               Conread position:
               301-543
               

               Cow position:
               chr27:299394-299625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               302-472
               

               Cow position:
               chr27:29841746-29841915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               302-512
               

               Cow position:
               chr27:15871149-15870939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 131
               

               Conread position:
               302-512
               

               Cow position:
               chr27:21666089-21666301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 174
               

               Conread position:
               302-515
               

               Cow position:
               chr27:11815760-11815971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               302-517
               

               Cow position:
               chr27:31452331-31452117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               302-519
               

               Cow position:
               chr27:7802057-7801842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               302-529
               

               Cow position:
               chr27:31170078-31170309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               302-530
               

               Cow position:
               chr27:13638997-13639225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               145, 172
               

               Conread position:
               302-530
               

               Cow position:
               chr27:19607673-19607899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               302-534
               

               Cow position:
               chr27:31151367-31151142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               302-539
               

               Cow position:
               chr27:15315503-15315276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               302-541
               

               Cow position:
               chr27:31386644-31386879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               42, 145
               

               Conread position:
               303-439
               

               Cow position:
               chr27:13917424-13917289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               303-513
               

               Cow position:
               chr27:24709538-24709333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               303-514
               

               Cow position:
               chr27:29319396-29319184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               142, 132
               

               Conread position:
               303-520
               

               Cow position:
               chr27:7958845-7959059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               303-520
               

               Cow position:
               chr27:11993881-11994095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               303-533
               

               Cow position:
               chr27:29693463-29693226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               303-534
               

               Cow position:
               chr27:8790755-8790985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               10, 156
               

               Conread position:
               303-534
               

               Cow position:
               chr27:22549782-22550012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               303-534
               

               Cow position:
               chr27:27438519-27438750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               303-541
               

               Cow position:
               chr27:10323822-10323595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               304-454
               

               Cow position:
               chr27:27673032-27673181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               304-510
               

               Cow position:
               chr27:19485859-19485653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               304-529
               

               Cow position:
               chr27:26173481-26173261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               304-530
               

               Cow position:
               chr27:24303930-24303705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 24
               

               Conread position:
               304-533
               

               Cow position:
               chr27:18435148-18435371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 148
               

               Conread position:
               304-537
               

               Cow position:
               chr27:27740307-27740538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               304-540
               

               Cow position:
               chr27:18507634-18507396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               200, 169
               

               Conread position:
               304-543
               

               Cow position:
               chr27:29478829-29478589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               305-532
               

               Cow position:
               chr27:26121743-26121518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               305-534
               

               Cow position:
               chr27:10404133-10404359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               305-534
               

               Cow position:
               chr27:10598974-10598745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               10, 125
               

               Conread position:
               306-520
               

               Cow position:
               chr27:7412375-7412166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               306-537
               

               Cow position:
               chr27:26859110-26859337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               307-517
               

               Cow position:
               chr27:24007449-24007240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               307-530
               

               Cow position:
               chr27:30414922-30415141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               307-535
               

               Cow position:
               chr27:7935175-7935400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 154
               

               Conread position:
               307-541
               

               Cow position:
               chr27:13254816-13255042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               309-525
               

               Cow position:
               chr27:29388651-29388439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               114, 143
               

               Conread position:
               312-512
               

               Cow position:
               chr27:22730705-22730911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 167
               

               Conread position:
               312-513
               

               Cow position:
               chr27:15332319-15332509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 130
               

               Conread position:
               312-544
               

               Cow position:
               chr27:11480660-11480890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               313-479
               

               Cow position:
               chr27:19756071-19755906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               157, 32
               

               Conread position:
               313-523
               

               Cow position:
               chr27:24731064-24731269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               29, 89
               

               Conread position:
               314-530
               

               Cow position:
               chr27:2930613-2930829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 160
               

               Conread position:
               316-461
               

               Cow position:
               chr27:14675043-14675188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-512
               

               Cow position:
               chr27:22401459-22401263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 160
               

               Conread position:
               318-444
               

               Cow position:
               chr27:19004353-19004479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-512
               

               Cow position:
               chr27:30605667-30605479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               319-529
               

               Cow position:
               chr27:20653286-20653495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               319-546
               

               Cow position:
               chr27:14841215-14841440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               191, 154
               

               Conread position:
               320-530
               

               Cow position:
               chr27:26481227-26481435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               172, 71
               

               Conread position:
               321-514
               

               Cow position:
               chr27:19452969-19452777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               321-520
               

               Cow position:
               chr27:26245580-26245774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               321-529
               

               Cow position:
               chr27:27648350-27648552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               321-533
               

               Cow position:
               chr27:6162443-6162644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               321-559
               

               Cow position:
               chr27:23527280-23527047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               149, 57
               

               Conread position:
               324-520
               

               Cow position:
               chr27:20548775-20548582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               324-548
               

               Cow position:
               chr27:24693377-24693161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               207, 57
               

               Conread position:
               325-536
               

               Cow position:
               chr27:12187158-12187370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               206, 148
               

               Conread position:
               325-540
               

               Cow position:
               chr27:11323293-11323078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               209, 148
               

               Conread position:
               326-534
               

               Cow position:
               chr27:7346634-7346428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               162, 31
               

               Conread position:
               329-530
               

               Cow position:
               chr27:4264735-4264935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               330-518
               

               Cow position:
               chr27:22254753-22254564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               331-463
               

               Cow position:
               chr27:17918760-17918892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               333-512
               

               Cow position:
               chr27:15237768-15237591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               333-530
               

               Cow position:
               chr27:5539740-5539930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               333-530
               

               Cow position:
               chr27:13181866-13181666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               333-534
               

               Cow position:
               chr27:4413863-4414057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               27, 129
               

               Conread position:
               333-535
               

               Cow position:
               chr27:18791554-18791757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               70, 142
               

               Conread position:
               335-472
               

               Cow position:
               chr27:16205740-16205605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               335-520
               

               Cow position:
               chr27:232507-232323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               335-534
               

               Cow position:
               chr27:11349229-11349043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               336-498
               

               Cow position:
               chr27:27747513-27747674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               336-514
               

               Cow position:
               chr27:26236278-26236106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               336-527
               

               Cow position:
               chr27:22792782-22792604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               336-528
               

               Cow position:
               chr27:26400769-26400953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               336-530
               

               Cow position:
               chr27:3518457-3518264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               336-530
               

               Cow position:
               chr27:13801761-13801567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               130, 24
               

               Conread position:
               336-534
               

               Cow position:
               chr27:26118452-26118255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               134, 109
               

               Conread position:
               336-536
               

               Cow position:
               chr27:18688457-18688656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               336-541
               

               Cow position:
               chr27:28015783-28015984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               337-519
               

               Cow position:
               chr27:24755939-24755764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               337-534
               

               Cow position:
               chr27:11134037-11133846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               337-538
               

               Cow position:
               chr27:20484681-20484487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               337-540
               

               Cow position:
               chr27:29308294-29308095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               338-528
               

               Cow position:
               chr27:20327450-20327261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               338-530
               

               Cow position:
               chr27:19483151-19483340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               339-499
               

               Cow position:
               chr27:24726077-24726238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               339-512
               

               Cow position:
               chr27:11507314-11507484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               339-530
               

               Cow position:
               chr27:17102845-17102662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               339-530
               

               Cow position:
               chr27:23940999-23941189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               342-529
               

               Cow position:
               chr27:20591875-20591690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               342-533
               

               Cow position:
               chr27:29892671-29892481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               342-542
               

               Cow position:
               chr27:28254184-28253986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               343-512
               

               Cow position:
               chr27:30694262-30694430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               343-530
               

               Cow position:
               chr27:19292866-19293052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               344-512
               

               Cow position:
               chr27:19411673-19411840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               344-530
               

               Cow position:
               chr27:20048578-20048399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               344-539
               

               Cow position:
               chr27:20127353-20127545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               345-517
               

               Cow position:
               chr27:14701696-14701867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               345-533
               

               Cow position:
               chr27:31035077-31034894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               345-534
               

               Cow position:
               chr27:13236491-13236682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               347-539
               

               Cow position:
               chr27:9338042-9338232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               348-540
               

               Cow position:
               chr27:31157970-31157776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               94, 127
               

               Conread position:
               349-488
               

               Cow position:
               chr27:670012-669876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               349-498
               

               Cow position:
               chr27:18491495-18491352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               349-506
               

               Cow position:
               chr27:18912584-18912735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               349-520
               

               Cow position:
               chr27:21951039-21951208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               349-520
               

               Cow position:
               chr27:30996889-30997057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               349-530
               

               Cow position:
               chr27:18752795-18752609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               121, 51
               

               Conread position:
               349-530
               

               Cow position:
               chr27:29246208-29246382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               349-534
               

               Cow position:
               chr27:6330577-6330392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 125
               

               Conread position:
               349-534
               

               Cow position:
               chr27:27827911-27828098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               96, 127
               

               Conread position:
               349-534
               

               Cow position:
               chr27:31515610-31515795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-535
               

               Cow position:
               chr27:19576384-19576566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               165, 103
               

               Conread position:
               349-542
               

               Cow position:
               chr27:6679435-6679629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               183, 124
               

               Conread position:
               349-543
               

               Cow position:
               chr27:9956492-9956685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               349-543
               

               Cow position:
               chr27:21677485-21677681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 127
               

               Conread position:
               350-471
               

               Cow position:
               chr27:23119968-23119848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               350-520
               

               Cow position:
               chr27:4544410-4544579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 81
               

               Conread position:
               350-541
               

               Cow position:
               chr27:14472245-14472427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               185, 42
               

               Conread position:
               351-538
               

               Cow position:
               chr27:19557326-19557148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               351-548
               

               Cow position:
               chr27:2325958-2325750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               354-457
               

               Cow position:
               chr27:27130487-27130589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               354-512
               

               Cow position:
               chr27:21202127-21201970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               354-517
               

               Cow position:
               chr27:23060179-23060341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               354-538
               

               Cow position:
               chr27:31157746-31157564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               354-539
               

               Cow position:
               chr27:9504487-9504306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               354-541
               

               Cow position:
               chr27:11464496-11464683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               178, 119
               

               Conread position:
               354-544
               

               Cow position:
               chr27:11208620-11208809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               355-533
               

               Cow position:
               chr27:27449952-27450125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               171, 97
               

               Conread position:
               357-516
               

               Cow position:
               chr27:1810155-1810312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 52
               

               Conread position:
               357-520
               

               Cow position:
               chr27:23177381-23177540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               357-520
               

               Cow position:
               chr27:26909660-26909816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               357-524
               

               Cow position:
               chr27:26314192-26314357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               357-530
               

               Cow position:
               chr27:23232847-23232674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               67, 121
               

               Conread position:
               357-534
               

               Cow position:
               chr27:20266294-20266468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               357-534
               

               Cow position:
               chr27:26980031-26980207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               358-512
               

               Cow position:
               chr27:18121116-18121271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               358-514
               

               Cow position:
               chr27:26175738-26175888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               358-542
               

               Cow position:
               chr27:26984092-26983913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               359-540
               

               Cow position:
               chr27:1674374-1674543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               360-529
               

               Cow position:
               chr27:30702124-30701958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               360-534
               

               Cow position:
               chr27:11145807-11145640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               360-534
               

               Cow position:
               chr27:31183504-31183330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               360-540
               

               Cow position:
               chr27:30444752-30444922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               360-543
               

               Cow position:
               chr27:23070022-23069851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               361-523
               

               Cow position:
               chr27:23930710-23930868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               361-537
               

               Cow position:
               chr27:29183289-29183471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               362-505
               

               Cow position:
               chr27:31498709-31498567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 66
               

               Conread position:
               362-512
               

               Cow position:
               chr27:17908333-17908481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               362-534
               

               Cow position:
               chr27:2036646-2036484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               365-540
               

               Cow position:
               chr27:19779801-19779629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               367-530
               

               Cow position:
               chr27:31248688-31248844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               368-534
               

               Cow position:
               chr27:12947874-12948039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               368-549
               

               Cow position:
               chr27:178783-178606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               370-530
               

               Cow position:
               chr27:18873966-18873815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               373-529
               

               Cow position:
               chr27:25000045-25000204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               373-530
               

               Cow position:
               chr27:6505330-6505486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               374-505
               

               Cow position:
               chr27:26317980-26317850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               374-529
               

               Cow position:
               chr27:20612438-20612284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               374-530
               

               Cow position:
               chr27:672581-672426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               374-542
               

               Cow position:
               chr27:16504996-16505156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               375-508
               

               Cow position:
               chr27:22237037-22236906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               375-534
               

               Cow position:
               chr27:18813626-18813786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               375-537
               

               Cow position:
               chr27:23760068-23760224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               159, 69
               

               Conread position:
               375-541
               

               Cow position:
               chr27:19805783-19805945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 28
               

               Conread position:
               375-542
               

               Cow position:
               chr27:26625122-26624956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               146, 103
               

               Conread position:
               375-548
               

               Cow position:
               chr27:19074109-19074279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               375-548
               

               Cow position:
               chr27:22583660-22583487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 99
               

               Conread position:
               377-516
               

               Cow position:
               chr27:26154232-26154094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               379-530
               

               Cow position:
               chr27:21101381-21101530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               379-543
               

               Cow position:
               chr27:26467650-26467813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               156, 7
               

               Conread position:
               380-541
               

               Cow position:
               chr27:29877565-29877726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               152, 97
               

               Conread position:
               382-534
               

               Cow position:
               chr27:4486871-4487022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               383-542
               

               Cow position:
               chr27:21054365-21054207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               387-530
               

               Cow position:
               chr27:1778954-1779087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               387-541
               

               Cow position:
               chr27:27012600-27012445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               145, 86
               

               Conread position:
               388-529
               

               Cow position:
               chr27:30458730-30458866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               388-530
               

               Cow position:
               chr27:30441605-30441464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               389-541
               

               Cow position:
               chr27:20825891-20826046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               393-534
               

               Cow position:
               chr27:22614756-22614613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               395-548
               

               Cow position:
               chr27:31443949-31443800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               397-542
               

               Cow position:
               chr27:30844163-30844304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               402-544
               

               Cow position:
               chr27:6752067-6751926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               402-556
               

               Cow position:
               chr27:20786010-20785856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               142, 75
               

               Conread position:
               403-530
               

               Cow position:
               chr27:19653686-19653815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               409-530
               

               Cow position:
               chr27:28472811-28472931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 0
               
Show alignments to all cow chromosomes.
Conread position:	254-530
Cow position:	chr27:12658314-12658591 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	182
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	73, 31
Conread position:	254-534
Cow position:	chr27:16786858-16786589 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	202
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	36, 0
Conread position:	255-404
Cow position:	chr27:28472814-28472664 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	111
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	87, 96
Conread position:	255-503
Cow position:	chr27:10582403-10582157 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	177
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	190, 32
Conread position:	255-505
Cow position:	chr27:7851419-7851173 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	169
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	186, 44
Conread position:	255-519
Cow position:	chr27:29798985-29798725 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	174
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	35, 0
Conread position:	255-520
Cow position:	chr27:13317946-13318205 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	196
Alignm E-value:	0
Alignm gaps (pig, cow):	42, 0
Conread position:	255-544
Cow position:	chr27:19509045-19508760 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	192
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	15, 0
Conread position:	256-434
Cow position:	chr27:17646137-17646314 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	127
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	51, 0
Conread position:	256-542
Cow position:	chr27:1636905-1637176 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	209
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	43, 0
Conread position:	257-519
Cow position:	chr27:22454749-22455020 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	194
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	168, 42
Conread position:	257-543
Cow position:	chr27:20637037-20637309 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	208
Alignm E-value:	5e-39
Alignm gaps (pig, cow):	102, 32
Conread position:	258-530
Cow position:	chr27:30872031-30872295 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	199
Alignm E-value:	2.94273e-44
Alignm gaps (pig, cow):	40, 0
Conread position:	259-432
Cow position:	chr27:715529-715357 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	126
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	40, 23
Conread position:	259-437
Cow position:	chr27:30354316-30354493 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	124
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	40, 0
Conread position:	259-444
Cow position:	chr27:2034540-2034353 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	139
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	65, 28
Conread position:	259-447
Cow position:	chr27:27064413-27064598 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	140
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	13, 0
Conread position:	259-450
Cow position:	chr27:8263308-8263500 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	140
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	170, 0
Conread position:	259-455
Cow position:	chr27:18826580-18826387 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	136
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	38, 0
Conread position:	259-461
Cow position:	chr27:15343253-15343452 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	154
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	177, 40