Cow genome map
| Conread name: | Ss1.1-Lym1-jns06_G12.r.3 |
| Conread position: | 12-216 |
| Cow position: | chr18:5909539-5909335 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 16-225 |
| Cow position: | chr18:51623279-51623488 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 18-146 |
| Cow position: | chr18:2312128-2311999 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 18-165 |
| Cow position: | chr18:8166782-8166930 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 18-192 |
| Cow position: | chr18:27591503-27591328 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 18-206 |
| Cow position: | chr18:47733354-47733165 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 18-206 |
| Cow position: | chr18:47754275-47754086 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 18-206 |
| Cow position: | chr18:47774965-47774776 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 18-212 |
| Cow position: | chr18:36654837-36654645 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 18-216 |
| Cow position: | chr18:42223548-42223359 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 137, 45 |
| Conread position: | 18-221 |
| Cow position: | chr18:9563564-9563361 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 19-213 |
| Cow position: | chr18:1137481-1137283 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 19-213 |
| Cow position: | chr18:31117956-31117761 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 23-216 |
| Cow position: | chr18:40049642-40049451 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 33-212 |
| Cow position: | chr18:8523625-8523442 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 59-221 |
| Cow position: | chr18:18580896-18581060 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 132 |
Show alignments to all cow chromosomes.